RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 Q8N1X5 172 aa8.69□□□□□ -1.02
SMARCA4-210ENST00000586892 CLRN3Q8NCR9 226 aa8.69□□□□□ -1.02
SMARCA4-210ENST00000586892 SMIM2Q9BVW6 85 aa8.69□□□□□ -1.02
SMARCA4-210ENST00000586892 NPYP01303 97 aa8.68□□□□□ -1.02
SMARCA4-210ENST00000586892 TMEM18Q96B42 140 aa8.68□□□□□ -1.02
SMARCA4-210ENST00000586892 PRELID3AQ96N28 172 aa8.68□□□□□ -1.02
SMARCA4-210ENST00000586892 CDC42SE2Q9NRR3 84 aa8.68□□□□□ -1.02
SMARCA4-210ENST00000586892 LAMTOR2Q9Y2Q5 125 aa8.68□□□□□ -1.02
SMARCA4-210ENST00000586892 CSDC2Q9Y534 153 aaKnown RBP8.68□□□□□ -1.02
SMARCA4-210ENST00000586892 ABCA13Q86UQ4 5058 aa8.68□□□□□ -1.02
SMARCA4-210ENST00000586892 TRAV9-1A0A075B6T8 112 aa8.67□□□□□ -1.02
SMARCA4-210ENST00000586892 PRSS1P07477 247 aa8.67□□□□□ -1.02
SMARCA4-210ENST00000586892 C10orf91Q5T1B1 145 aa8.67□□□□□ -1.02
SMARCA4-210ENST00000586892 DGAT2L7PQ6IED9 249 aa8.67□□□□□ -1.02
SMARCA4-210ENST00000586892 Q6ZSA8 131 aa8.67□□□□□ -1.02
SMARCA4-210ENST00000586892 ZNF664Q8N3J9 261 aa8.67□□□□□ -1.02
SMARCA4-210ENST00000586892 CHCHD10Q8WYQ3 142 aaPredicted RBP8.67□□□□□ -1.02
SMARCA4-210ENST00000586892 FAT1Q14517 4588 aa8.66□□□□□ -1.02
SMARCA4-210ENST00000586892 GAGE12HA6NDE8 117 aa8.66□□□□□ -1.02
SMARCA4-210ENST00000586892 KRTAP17-1Q9BYP8 105 aa8.66□□□□□ -1.02
SMARCA4-210ENST00000586892 UBE2D4Q9Y2X8 147 aa8.66□□□□□ -1.02
SMARCA4-210ENST00000586892 LINC00959A0A1B0GUT2 108 aa8.65□□□□□ -1.02
SMARCA4-210ENST00000586892 S100PP25815 95 aa8.65□□□□□ -1.02
SMARCA4-210ENST00000586892 LINC01620Q4KN68 170 aa8.65□□□□□ -1.02
SMARCA4-210ENST00000586892 CFAP161Q6P656 301 aa8.65□□□□□ -1.02
SMARCA4-210ENST00000586892 TIMM21Q9BVV7 248 aa8.65□□□□□ -1.02
SMARCA4-210ENST00000586892 FAM30AQ9NZY2 134 aa8.65□□□□□ -1.02
SMARCA4-210ENST00000586892 CARHSP1Q9Y2V2 147 aaKnown RBP8.65□□□□□ -1.02
SMARCA4-210ENST00000586892 hDV102S1A0JD36 115 aa8.64□□□□□ -1.03
SMARCA4-210ENST00000586892 PRSS47A8MTI9 375 aa8.64□□□□□ -1.03
SMARCA4-210ENST00000586892 RAB5AP20339 215 aa8.64□□□□□ -1.03
SMARCA4-210ENST00000586892 RHEBQ15382 184 aa8.64□□□□□ -1.03
SMARCA4-210ENST00000586892 SS18Q15532 418 aa8.64□□□□□ -1.03
SMARCA4-210ENST00000586892 KRTAP4-5Q9BYR2 181 aa8.64□□□□□ -1.03
SMARCA4-210ENST00000586892 MAP1LC3AQ9H492 121 aa8.64□□□□□ -1.03
SMARCA4-210ENST00000586892 CCL25O15444 150 aa8.63□□□□□ -1.03
SMARCA4-210ENST00000586892 XCL1P47992 114 aa8.63□□□□□ -1.03
SMARCA4-210ENST00000586892 CNBPP62633 177 aaKnown RBP8.63□□□□□ -1.03
SMARCA4-210ENST00000586892 FOXI1Q12951 378 aa8.63□□□□□ -1.03
SMARCA4-210ENST00000586892 AP5S1Q9NUS5 200 aa8.63□□□□□ -1.03
SMARCA4-210ENST00000586892 C1orf196B1AJZ1 125 aa8.62□□□□□ -1.03
SMARCA4-210ENST00000586892 EPM2AB3EWF7 344 aa8.62□□□□□ -1.03
SMARCA4-210ENST00000586892 RPL39P62891 51 aaKnown RBP8.62□□□□□ -1.03
SMARCA4-210ENST00000586892 HAMPP81172 84 aa8.62□□□□□ -1.03
SMARCA4-210ENST00000586892 C15orf56Q8N910 161 aa8.62□□□□□ -1.03
SMARCA4-210ENST00000586892 C9orf163Q8N9P6 203 aa8.62□□□□□ -1.03
SMARCA4-210ENST00000586892 SPANXA1Q9NS26 97 aa8.62□□□□□ -1.03
SMARCA4-210ENST00000586892 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.61□□□□□ -1.03
SMARCA4-210ENST00000586892 LOC389332A0A1B0GUA5 103 aa8.61□□□□□ -1.03
SMARCA4-210ENST00000586892 CD164L2Q6UWJ8 174 aa8.61□□□□□ -1.03
SMARCA4-210ENST00000586892 Q6ZUT4 128 aa8.61□□□□□ -1.03
SMARCA4-210ENST00000586892 RPS10P5Q9NQ39 176 aa8.61□□□□□ -1.03
SMARCA4-210ENST00000586892 GVQW2A0A096LPI5 108 aaPredicted RBP8.6□□□□□ -1.03
SMARCA4-210ENST00000586892 K7EMI3 77 aa8.6□□□□□ -1.03
SMARCA4-210ENST00000586892 NDUFA5Q16718 116 aa8.6□□□□□ -1.03
SMARCA4-210ENST00000586892 COX19Q49B96 90 aa8.6□□□□□ -1.03
SMARCA4-210ENST00000586892 RNASE13Q5GAN3 156 aaKnown RBP8.6□□□□□ -1.03
SMARCA4-210ENST00000586892 Q8N8P6 123 aa8.6□□□□□ -1.03
SMARCA4-210ENST00000586892 CHAC1Q9BUX1 264 aa8.6□□□□□ -1.03
SMARCA4-210ENST00000586892 GNB1LQ9BYB4 327 aa8.6□□□□□ -1.03
SMARCA4-210ENST00000586892 SMR3BP02814 79 aaPredicted RBP8.59□□□□□ -1.03
SMARCA4-210ENST00000586892 MRPS36P82909 103 aaKnown RBP8.59□□□□□ -1.03
SMARCA4-210ENST00000586892 VPS13BQ7Z7G8 4022 aa8.59□□□□□ -1.03
SMARCA4-210ENST00000586892 TRAV13-1A0A0B4J241 112 aa8.58□□□□□ -1.04
SMARCA4-210ENST00000586892 IGHV1-58A0A0C4DH39 117 aa8.58□□□□□ -1.04
SMARCA4-210ENST00000586892 FAM229AH3BQW9 127 aa8.58□□□□□ -1.04
SMARCA4-210ENST00000586892 SLPIP03973 132 aa8.58□□□□□ -1.04
SMARCA4-210ENST00000586892 IFI27P40305 119 aaPredicted RBP8.58□□□□□ -1.04
SMARCA4-210ENST00000586892 HIGD2BQ4VC39 106 aa8.58□□□□□ -1.04
SMARCA4-210ENST00000586892 ORMDL2Q53FV1 153 aa8.58□□□□□ -1.04
SMARCA4-210ENST00000586892 Q5VSD8 79 aa8.58□□□□□ -1.04
SMARCA4-210ENST00000586892 SCXQ7RTU7 201 aa8.58□□□□□ -1.04
SMARCA4-210ENST00000586892 NXT2Q9NPJ8 142 aaKnown RBP8.58□□□□□ -1.04
SMARCA4-210ENST00000586892 PYGO1Q9Y3Y4 419 aa8.58□□□□□ -1.04
SMARCA4-210ENST00000586892 IGHV3-64A0A075B6Q5 118 aa8.57□□□□□ -1.04
SMARCA4-210ENST00000586892 APOC3P02656 99 aa8.57□□□□□ -1.04
SMARCA4-210ENST00000586892 MT-ND6P03923 174 aa8.57□□□□□ -1.04
SMARCA4-210ENST00000586892 SDIM1Q6ZPB5 146 aa8.57□□□□□ -1.04
SMARCA4-210ENST00000586892 SVBPQ8N300 66 aa8.57□□□□□ -1.04
SMARCA4-210ENST00000586892 FAM104AQ969W3 186 aa8.57□□□□□ -1.04
SMARCA4-210ENST00000586892 SRRM2Q9UQ35 2752 aaKnown RBP8.57□□□□□ -1.04
SMARCA4-210ENST00000586892 COX7A2LO14548 114 aa8.56□□□□□ -1.04
SMARCA4-210ENST00000586892 SNAPINO95295 136 aa8.56□□□□□ -1.04
SMARCA4-210ENST00000586892 MALP21145 153 aa8.56□□□□□ -1.04
SMARCA4-210ENST00000586892 KIAA1644Q3SXP7 199 aa8.56□□□□□ -1.04
SMARCA4-210ENST00000586892 CYSLTR1Q9Y271 337 aa8.56□□□□□ -1.04
SMARCA4-210ENST00000586892 IFITM10A6NMD0 228 aa8.55□□□□□ -1.04
SMARCA4-210ENST00000586892 G0S2P27469 103 aa8.55□□□□□ -1.04
SMARCA4-210ENST00000586892 C2orf66Q6UXQ4 117 aa8.55□□□□□ -1.04
SMARCA4-210ENST00000586892 CIRBP-AS1Q8TBR5 109 aa8.55□□□□□ -1.04
SMARCA4-210ENST00000586892 OPRPNQ99935 248 aaPredicted RBP8.55□□□□□ -1.04
SMARCA4-210ENST00000586892 IGLV4-3A0A075B6K6 122 aa8.54□□□□□ -1.04
SMARCA4-210ENST00000586892 ZNF561-AS1K7EIQ3 104 aa8.54□□□□□ -1.04
SMARCA4-210ENST00000586892 TMEM141Q96I45 108 aa8.54□□□□□ -1.04
SMARCA4-210ENST00000586892 MRPL18Q9H0U6 180 aaKnown RBP8.54□□□□□ -1.04
SMARCA4-210ENST00000586892 NPSP0C0P6 89 aa8.53□□□□□ -1.04
SMARCA4-210ENST00000586892 SLC7A5P1Q8MH63 180 aa8.53□□□□□ -1.04
SMARCA4-210ENST00000586892 LINC00528Q8N1L1 170 aa8.53□□□□□ -1.04
SMARCA4-210ENST00000586892 ALKBH7Q9BT30 221 aaPredicted RBP8.53□□□□□ -1.04
SMARCA4-210ENST00000586892 APOMO95445 188 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms