RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 RNASEKQ6P5S7 137 aaKnown RBP11.67□□□□□ -0.54
TOP3A-220ENST00000585031 RNF185Q96GF1 192 aa11.67□□□□□ -0.54
TOP3A-220ENST00000585031 TRBV6-4A0A1B0GX49 114 aa11.66□□□□□ -0.54
TOP3A-220ENST00000585031 PMCHP20382 165 aa11.66□□□□□ -0.54
TOP3A-220ENST00000585031 RHOHQ15669 191 aa11.66□□□□□ -0.54
TOP3A-220ENST00000585031 NIT1Q86X76 327 aa11.66□□□□□ -0.54
TOP3A-220ENST00000585031 MRAP2Q96G30 205 aa11.66□□□□□ -0.54
TOP3A-220ENST00000585031 PRADC1Q9BSG0 188 aa11.66□□□□□ -0.54
TOP3A-220ENST00000585031 LPAP08519 4548 aa11.65□□□□□ -0.54
TOP3A-220ENST00000585031 PANO1I0J062 215 aa11.65□□□□□ -0.54
TOP3A-220ENST00000585031 NUPR1O60356 82 aa11.65□□□□□ -0.54
TOP3A-220ENST00000585031 AMTP48728 403 aa11.65□□□□□ -0.54
TOP3A-220ENST00000585031 FA2HQ7L5A8 372 aa11.65□□□□□ -0.54
TOP3A-220ENST00000585031 LINC00518Q8N0U6 118 aa11.65□□□□□ -0.54
TOP3A-220ENST00000585031 PRSS3P2Q8NHM4 247 aa11.65□□□□□ -0.54
TOP3A-220ENST00000585031 LINC00614P0C842 121 aa11.64□□□□□ -0.55
TOP3A-220ENST00000585031 LINC00694P0DN24 101 aa11.64□□□□□ -0.55
TOP3A-220ENST00000585031 MAP1LC3AQ9H492 121 aa11.64□□□□□ -0.55
TOP3A-220ENST00000585031 IGKV2D-24A0A075B6R9 120 aa11.63□□□□□ -0.55
TOP3A-220ENST00000585031 PPP1R17O96001 155 aa11.63□□□□□ -0.55
TOP3A-220ENST00000585031 ZNF876PQ49A33 203 aa11.63□□□□□ -0.55
TOP3A-220ENST00000585031 NCR2O95944 276 aa11.62□□□□□ -0.55
TOP3A-220ENST00000585031 MGPP08493 103 aa11.62□□□□□ -0.55
TOP3A-220ENST00000585031 C12orf57Q99622 126 aa11.62□□□□□ -0.55
TOP3A-220ENST00000585031 KRTAP9-2Q9BYQ4 174 aa11.62□□□□□ -0.55
TOP3A-220ENST00000585031 COX11Q9Y6N1 276 aa11.62□□□□□ -0.55
TOP3A-220ENST00000585031 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-220ENST00000585031 SMKR1H3BMG3 65 aa11.61□□□□□ -0.55
TOP3A-220ENST00000585031 NPYP01303 97 aa11.61□□□□□ -0.55
TOP3A-220ENST00000585031 PIK3CD-AS1Q5SR53 167 aa11.61□□□□□ -0.55
TOP3A-220ENST00000585031 C14orf178Q8N769 122 aaPredicted RBP11.61□□□□□ -0.55
TOP3A-220ENST00000585031 PTH2Q96A98 100 aa11.61□□□□□ -0.55
TOP3A-220ENST00000585031 AP5S1Q9NUS5 200 aa11.61□□□□□ -0.55
TOP3A-220ENST00000585031 GAGE12JA6NER3 117 aa11.6□□□□□ -0.55
TOP3A-220ENST00000585031 TNFRSF6BO95407 300 aa11.6□□□□□ -0.55
TOP3A-220ENST00000585031 GAGE1Q13065 139 aa11.6□□□□□ -0.55
TOP3A-220ENST00000585031 GAGE4Q13068 117 aa11.6□□□□□ -0.55
TOP3A-220ENST00000585031 GAGE5Q13069 117 aa11.6□□□□□ -0.55
TOP3A-220ENST00000585031 GAGE13Q4V321 117 aa11.6□□□□□ -0.55
TOP3A-220ENST00000585031 NXT2Q9NPJ8 142 aaKnown RBP11.6□□□□□ -0.55
TOP3A-220ENST00000585031 KLK12Q9UKR0 248 aa11.6□□□□□ -0.55
TOP3A-220ENST00000585031 LOC389332A0A1B0GUA5 103 aa11.59□□□□□ -0.55
TOP3A-220ENST00000585031 GAS8-AS1O95177 125 aa11.59□□□□□ -0.55
TOP3A-220ENST00000585031 JOSD1Q15040 202 aaPredicted RBP11.59□□□□□ -0.55
TOP3A-220ENST00000585031 URB1-AS1Q96HZ7 61 aa11.59□□□□□ -0.55
TOP3A-220ENST00000585031 FAM19A2Q8N3H0 131 aa11.58□□□□□ -0.56
TOP3A-220ENST00000585031 UBE2WQ96B02 151 aa11.58□□□□□ -0.56
TOP3A-220ENST00000585031 IFI27P40305 119 aaPredicted RBP11.57□□□□□ -0.56
TOP3A-220ENST00000585031 PYY3Q5JQD4 70 aa11.57□□□□□ -0.56
TOP3A-220ENST00000585031 RMI2Q96E14 147 aa11.57□□□□□ -0.56
TOP3A-220ENST00000585031 KIF25-AS1Q9Y6Z4 181 aa11.57□□□□□ -0.56
TOP3A-220ENST00000585031 IGHV1-24A0A0C4DH33 117 aa11.56□□□□□ -0.56
TOP3A-220ENST00000585031 PRSS47A8MTI9 375 aa11.56□□□□□ -0.56
TOP3A-220ENST00000585031 A8MWV9 139 aa11.56□□□□□ -0.56
TOP3A-220ENST00000585031 F5H697 171 aa11.56□□□□□ -0.56
TOP3A-220ENST00000585031 CIDEAO60543 219 aa11.56□□□□□ -0.56
TOP3A-220ENST00000585031 Q8N8P6 123 aa11.56□□□□□ -0.56
TOP3A-220ENST00000585031 NRACQ8N912 160 aa11.56□□□□□ -0.56
TOP3A-220ENST00000585031 C20orf78Q9BR46 151 aa11.56□□□□□ -0.56
TOP3A-220ENST00000585031 HSPB8Q9UJY1 196 aa11.56□□□□□ -0.56
TOP3A-220ENST00000585031 TRAV26-2A0A0B4J265 109 aa11.55□□□□□ -0.56
TOP3A-220ENST00000585031 ZNF56Q15929 161 aa11.55□□□□□ -0.56
TOP3A-220ENST00000585031 NIT2Q9NQR4 276 aa11.55□□□□□ -0.56
TOP3A-220ENST00000585031 A0A087WWL8 130 aa11.54□□□□□ -0.56
TOP3A-220ENST00000585031 RHODO00212 210 aa11.54□□□□□ -0.56
TOP3A-220ENST00000585031 LEPROTL1O95214 131 aa11.54□□□□□ -0.56
TOP3A-220ENST00000585031 SCGB1D1O95968 90 aa11.54□□□□□ -0.56
TOP3A-220ENST00000585031 KRTDAPP60985 99 aa11.54□□□□□ -0.56
TOP3A-220ENST00000585031 FAM74A4Q5TZK3 123 aa11.54□□□□□ -0.56
TOP3A-220ENST00000585031 JPT2Q9H910 190 aa11.54□□□□□ -0.56
TOP3A-220ENST00000585031 LINC01546A6NGU7 62 aa11.53□□□□□ -0.56
TOP3A-220ENST00000585031 H7C1H1 209 aa11.53□□□□□ -0.56
TOP3A-220ENST00000585031 PRSS1P07477 247 aa11.53□□□□□ -0.56
TOP3A-220ENST00000585031 SUMO2P61956 95 aaKnown RBP11.53□□□□□ -0.56
TOP3A-220ENST00000585031 SUMO4Q6EEV6 95 aa11.53□□□□□ -0.56
TOP3A-220ENST00000585031 SMIM2Q9BVW6 85 aa11.53□□□□□ -0.56
TOP3A-220ENST00000585031 K7EMI3 77 aa11.52□□□□□ -0.57
TOP3A-220ENST00000585031 HBDP02042 147 aa11.52□□□□□ -0.57
TOP3A-220ENST00000585031 S100A12P80511 92 aa11.52□□□□□ -0.57
TOP3A-220ENST00000585031 UFSP1Q6NVU6 142 aa11.52□□□□□ -0.57
TOP3A-220ENST00000585031 ST20Q9HBF5 79 aa11.52□□□□□ -0.57
TOP3A-220ENST00000585031 RPL32P62910 135 aaKnown RBP11.51□□□□□ -0.57
TOP3A-220ENST00000585031 PMCHL1Q16048 86 aa11.51□□□□□ -0.57
TOP3A-220ENST00000585031 ENHOQ6UWT2 76 aa11.51□□□□□ -0.57
TOP3A-220ENST00000585031 SDIM1Q6ZPB5 146 aa11.51□□□□□ -0.57
TOP3A-220ENST00000585031 C9orf163Q8N9P6 203 aa11.51□□□□□ -0.57
TOP3A-220ENST00000585031 USP17L23D6RBM5 183 aa11.5□□□□□ -0.57
TOP3A-220ENST00000585031 C3orf79P0CE67 100 aa11.5□□□□□ -0.57
TOP3A-220ENST00000585031 MAP1LC3CQ9BXW4 147 aa11.5□□□□□ -0.57
TOP3A-220ENST00000585031 TRBV6-5A0A0K0K1A5 114 aa11.49□□□□□ -0.57
TOP3A-220ENST00000585031 C20orf202A1L168 122 aa11.49□□□□□ -0.57
TOP3A-220ENST00000585031 FCER1GP30273 86 aa11.49□□□□□ -0.57
TOP3A-220ENST00000585031 C14orf177Q52M58 125 aa11.49□□□□□ -0.57
TOP3A-220ENST00000585031 ORMDL2Q53FV1 153 aa11.49□□□□□ -0.57
TOP3A-220ENST00000585031 RPL39LQ96EH5 51 aaKnown RBP11.49□□□□□ -0.57
TOP3A-220ENST00000585031 LINC01600Q96MT4 127 aa11.49□□□□□ -0.57
TOP3A-220ENST00000585031 G0S2P27469 103 aa11.48□□□□□ -0.57
TOP3A-220ENST00000585031 ZFP2Q6ZN57 461 aa11.48□□□□□ -0.57
TOP3A-220ENST00000585031 M0QY20 66 aa11.47□□□□□ -0.57
TOP3A-220ENST00000585031 VCYO14598 125 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms