RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 SUMO2P61956 95 aaKnown RBP11.04□□□□□ -0.64
ITGB4-213ENST00000584939 H7C423 109 aa11.03□□□□□ -0.64
ITGB4-213ENST00000584939 J3QL48 77 aa11.03□□□□□ -0.64
ITGB4-213ENST00000584939 CNBPP62633 177 aaKnown RBP11.03□□□□□ -0.64
ITGB4-213ENST00000584939 RNASEKQ6P5S7 137 aaKnown RBP11.03□□□□□ -0.64
ITGB4-213ENST00000584939 SDIM1Q6ZPB5 146 aa11.03□□□□□ -0.64
ITGB4-213ENST00000584939 HERC1Q15751 4861 aa11.02□□□□□ -0.64
ITGB4-213ENST00000584939 GAGE12HA6NDE8 117 aa11.02□□□□□ -0.65
ITGB4-213ENST00000584939 D6R8Y8 96 aa11.02□□□□□ -0.65
ITGB4-213ENST00000584939 NPYP01303 97 aa11.02□□□□□ -0.65
ITGB4-213ENST00000584939 S100A8P05109 93 aa11.02□□□□□ -0.65
ITGB4-213ENST00000584939 FGF6P10767 208 aa11.02□□□□□ -0.65
ITGB4-213ENST00000584939 KRTAP10-4P60372 401 aaPredicted RBP11.02□□□□□ -0.65
ITGB4-213ENST00000584939 AP5S1Q9NUS5 200 aa11.02□□□□□ -0.65
ITGB4-213ENST00000584939 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.02□□□□□ -0.65
ITGB4-213ENST00000584939 DMBT1Q9UGM3 2413 aaPredicted RBP11.01□□□□□ -0.65
ITGB4-213ENST00000584939 VCYO14598 125 aa11.01□□□□□ -0.65
ITGB4-213ENST00000584939 TNFRSF6BO95407 300 aa11.01□□□□□ -0.65
ITGB4-213ENST00000584939 PPP1R17O96001 155 aa11.01□□□□□ -0.65
ITGB4-213ENST00000584939 CKS2P33552 79 aa11.01□□□□□ -0.65
ITGB4-213ENST00000584939 RPL32P62910 135 aaKnown RBP11.01□□□□□ -0.65
ITGB4-213ENST00000584939 MYCBP2O75592 4640 aa11□□□□□ -0.65
ITGB4-213ENST00000584939 PANO1I0J062 215 aa11□□□□□ -0.65
ITGB4-213ENST00000584939 SLPIP03973 132 aa11□□□□□ -0.65
ITGB4-213ENST00000584939 IMMP2LQ96T52 175 aa11□□□□□ -0.65
ITGB4-213ENST00000584939 C20orf78Q9BR46 151 aa11□□□□□ -0.65
ITGB4-213ENST00000584939 CARHSP1Q9Y2V2 147 aaKnown RBP11□□□□□ -0.65
ITGB4-213ENST00000584939 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.99□□□□□ -0.65
ITGB4-213ENST00000584939 CFAP161Q6P656 301 aa10.99□□□□□ -0.65
ITGB4-213ENST00000584939 MRPL52Q86TS9 123 aaKnown RBP10.99□□□□□ -0.65
ITGB4-213ENST00000584939 CHCHD10Q8WYQ3 142 aaPredicted RBP10.99□□□□□ -0.65
ITGB4-213ENST00000584939 BTF3L4Q96K17 158 aa10.99□□□□□ -0.65
ITGB4-213ENST00000584939 IGHV3-64A0A075B6Q5 118 aa10.98□□□□□ -0.65
ITGB4-213ENST00000584939 KRTAP29-1A8MX34 341 aaPredicted RBP10.98□□□□□ -0.65
ITGB4-213ENST00000584939 ZNF25P17030 456 aaPredicted RBP10.98□□□□□ -0.65
ITGB4-213ENST00000584939 C15orf56Q8N910 161 aa10.98□□□□□ -0.65
ITGB4-213ENST00000584939 CTDSP1Q9GZU7 261 aa10.98□□□□□ -0.65
ITGB4-213ENST00000584939 C7orf77A4D0Y5 90 aa10.97□□□□□ -0.65
ITGB4-213ENST00000584939 PHOX2AO14813 284 aa10.97□□□□□ -0.65
ITGB4-213ENST00000584939 PPBPP02775 128 aa10.97□□□□□ -0.65
ITGB4-213ENST00000584939 RPL37AP61513 92 aaKnown RBP10.97□□□□□ -0.65
ITGB4-213ENST00000584939 FAM104AQ969W3 186 aa10.97□□□□□ -0.65
ITGB4-213ENST00000584939 TMEM101Q96IK0 257 aa10.97□□□□□ -0.65
ITGB4-213ENST00000584939 SMIM2Q9BVW6 85 aa10.97□□□□□ -0.65
ITGB4-213ENST00000584939 PRSS47A8MTI9 375 aa10.96□□□□□ -0.65
ITGB4-213ENST00000584939 TMEM136Q6ZRR5 245 aa10.96□□□□□ -0.65
ITGB4-213ENST00000584939 ORMDL3Q8N138 153 aa10.96□□□□□ -0.65
ITGB4-213ENST00000584939 OR5A1Q8NGJ0 315 aa10.96□□□□□ -0.65
ITGB4-213ENST00000584939 DPH3Q96FX2 82 aa10.96□□□□□ -0.65
ITGB4-213ENST00000584939 CDC42SE2Q9NRR3 84 aa10.96□□□□□ -0.65
ITGB4-213ENST00000584939 HIGD2BQ4VC39 106 aa10.95□□□□□ -0.66
ITGB4-213ENST00000584939 PRELID3AQ96N28 172 aa10.95□□□□□ -0.66
ITGB4-213ENST00000584939 KIR2DL4Q99706 377 aa10.95□□□□□ -0.66
ITGB4-213ENST00000584939 UBE2D4Q9Y2X8 147 aa10.95□□□□□ -0.66
ITGB4-213ENST00000584939 FCER1GP30273 86 aa10.94□□□□□ -0.66
ITGB4-213ENST00000584939 CIRBPQ14011 172 aaKnown RBP10.94□□□□□ -0.66
ITGB4-213ENST00000584939 TRAV9-1A0A075B6T8 112 aa10.93□□□□□ -0.66
ITGB4-213ENST00000584939 LINC00959A0A1B0GUT2 108 aa10.93□□□□□ -0.66
ITGB4-213ENST00000584939 TCAPO15273 167 aa10.93□□□□□ -0.66
ITGB4-213ENST00000584939 CHTF8P0CG12 524 aa10.93□□□□□ -0.66
ITGB4-213ENST00000584939 RPL39P62891 51 aaKnown RBP10.93□□□□□ -0.66
ITGB4-213ENST00000584939 FOXI1Q12951 378 aa10.93□□□□□ -0.66
ITGB4-213ENST00000584939 CSDC2Q9Y534 153 aaKnown RBP10.93□□□□□ -0.66
ITGB4-213ENST00000584939 XCL1P47992 114 aa10.92□□□□□ -0.66
ITGB4-213ENST00000584939 ZNF664Q8N3J9 261 aa10.92□□□□□ -0.66
ITGB4-213ENST00000584939 GVQW2A0A096LPI5 108 aaPredicted RBP10.91□□□□□ -0.66
ITGB4-213ENST00000584939 CCL25O15444 150 aa10.91□□□□□ -0.66
ITGB4-213ENST00000584939 TIMM21Q9BVV7 248 aa10.91□□□□□ -0.66
ITGB4-213ENST00000584939 LAMTOR2Q9Y2Q5 125 aa10.91□□□□□ -0.66
ITGB4-213ENST00000584939 A0A087WYN8 130 aa10.9□□□□□ -0.66
ITGB4-213ENST00000584939 OXTP01178 125 aa10.9□□□□□ -0.66
ITGB4-213ENST00000584939 COX6A2Q02221 97 aa10.9□□□□□ -0.66
ITGB4-213ENST00000584939 RHEBQ15382 184 aa10.9□□□□□ -0.66
ITGB4-213ENST00000584939 SS18Q15532 418 aa10.9□□□□□ -0.66
ITGB4-213ENST00000584939 SPACA4Q8TDM5 124 aa10.9□□□□□ -0.66
ITGB4-213ENST00000584939 HNRNPA3P51991 378 aaKnown RBP10.89□□□□□ -0.67
ITGB4-213ENST00000584939 KIAA1644Q3SXP7 199 aa10.89□□□□□ -0.67
ITGB4-213ENST00000584939 RNASE13Q5GAN3 156 aaKnown RBP10.89□□□□□ -0.67
ITGB4-213ENST00000584939 Q6ZUT4 128 aa10.89□□□□□ -0.67
ITGB4-213ENST00000584939 PRSS3P2Q8NHM4 247 aa10.88□□□□□ -0.67
ITGB4-213ENST00000584939 OPRPNQ99935 248 aaPredicted RBP10.88□□□□□ -0.67
ITGB4-213ENST00000584939 RPS10P5Q9NQ39 176 aa10.88□□□□□ -0.67
ITGB4-213ENST00000584939 IGHV1-58A0A0C4DH39 117 aa10.87□□□□□ -0.67
ITGB4-213ENST00000584939 LOC389332A0A1B0GUA5 103 aa10.87□□□□□ -0.67
ITGB4-213ENST00000584939 CD164L2Q6UWJ8 174 aa10.87□□□□□ -0.67
ITGB4-213ENST00000584939 Q8N8P6 123 aa10.87□□□□□ -0.67
ITGB4-213ENST00000584939 PLAC8Q9NZF1 115 aa10.87□□□□□ -0.67
ITGB4-213ENST00000584939 APOC3P02656 99 aa10.86□□□□□ -0.67
ITGB4-213ENST00000584939 SMAGPQ0VAQ4 97 aa10.86□□□□□ -0.67
ITGB4-213ENST00000584939 LINC00526Q96FQ7 95 aa10.86□□□□□ -0.67
ITGB4-213ENST00000584939 GNB1LQ9BYB4 327 aa10.86□□□□□ -0.67
ITGB4-213ENST00000584939 MAP1LC3AQ9H492 121 aa10.86□□□□□ -0.67
ITGB4-213ENST00000584939 IGKV2-24A0A0C4DH68 120 aa10.85□□□□□ -0.67
ITGB4-213ENST00000584939 S100PP25815 95 aa10.85□□□□□ -0.67
ITGB4-213ENST00000584939 MAJINQ3KP22 176 aa10.85□□□□□ -0.67
ITGB4-213ENST00000584939 TMEM18Q96B42 140 aa10.85□□□□□ -0.67
ITGB4-213ENST00000584939 MRPS36P82909 103 aaKnown RBP10.84□□□□□ -0.67
ITGB4-213ENST00000584939 SPANXA1Q9NS26 97 aa10.84□□□□□ -0.67
ITGB4-213ENST00000584939 C1orf196B1AJZ1 125 aa10.83□□□□□ -0.68
ITGB4-213ENST00000584939 IFI27P40305 119 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms