RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 IGLV1-50A0A075B6I6 118 aa8.13□□□□□ -1.11
COPS3-218ENST00000584216 PMCHP20382 165 aa8.13□□□□□ -1.11
COPS3-218ENST00000584216 RPL39LQ96EH5 51 aaKnown RBP8.13□□□□□ -1.11
COPS3-218ENST00000584216 CAMK2N2Q96S95 79 aa8.13□□□□□ -1.11
COPS3-218ENST00000584216 TEX46H3BTG2 121 aa8.12□□□□□ -1.11
COPS3-218ENST00000584216 COX7A2LO14548 114 aa8.12□□□□□ -1.11
COPS3-218ENST00000584216 PDE6DO43924 150 aa8.12□□□□□ -1.11
COPS3-218ENST00000584216 IGLV7-43P04211 117 aa8.12□□□□□ -1.11
COPS3-218ENST00000584216 BCL2P10415 239 aa8.12□□□□□ -1.11
COPS3-218ENST00000584216 RPL18AQ02543 176 aaKnown RBP8.12□□□□□ -1.11
COPS3-218ENST00000584216 ZNF345Q14585 488 aa8.12□□□□□ -1.11
COPS3-218ENST00000584216 PRR4Q16378 134 aa8.12□□□□□ -1.11
COPS3-218ENST00000584216 NUP35Q8NFH5 326 aa8.12□□□□□ -1.11
COPS3-218ENST00000584216 C1orf196B1AJZ1 125 aa8.11□□□□□ -1.11
COPS3-218ENST00000584216 H0Y9J4 135 aa8.11□□□□□ -1.11
COPS3-218ENST00000584216 MRPL52Q86TS9 123 aaKnown RBP8.11□□□□□ -1.11
COPS3-218ENST00000584216 C2orf48Q96LS8 159 aa8.11□□□□□ -1.11
COPS3-218ENST00000584216 CDC42SE2Q9NRR3 84 aa8.11□□□□□ -1.11
COPS3-218ENST00000584216 TRAV1-1A0A0B4J248 108 aa8.1□□□□□ -1.11
COPS3-218ENST00000584216 TRBV6-5A0A0K0K1A5 114 aa8.1□□□□□ -1.11
COPS3-218ENST00000584216 RAB19A4D1S5 217 aa8.1□□□□□ -1.11
COPS3-218ENST00000584216 G3V3Q6 166 aa8.1□□□□□ -1.11
COPS3-218ENST00000584216 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.1□□□□□ -1.11
COPS3-218ENST00000584216 ESDP10768 282 aa8.1□□□□□ -1.11
COPS3-218ENST00000584216 RPL13AP40429 203 aaKnown RBP8.1□□□□□ -1.11
COPS3-218ENST00000584216 UBE2D1P51668 147 aa8.1□□□□□ -1.11
COPS3-218ENST00000584216 MEF2BQ02080 365 aaPredicted RBP8.1□□□□□ -1.11
COPS3-218ENST00000584216 SMAGPQ0VAQ4 97 aa8.1□□□□□ -1.11
COPS3-218ENST00000584216 PHF5AQ7RTV0 110 aaKnown RBP8.1□□□□□ -1.11
COPS3-218ENST00000584216 KRTAP3-3Q9BYR6 98 aa8.1□□□□□ -1.11
COPS3-218ENST00000584216 KRTAP3-2Q9BYR7 98 aa8.1□□□□□ -1.11
COPS3-218ENST00000584216 RPP21Q9H633 154 aaKnown RBP8.1□□□□□ -1.11
COPS3-218ENST00000584216 A0A087WZ39 114 aa8.09□□□□□ -1.11
COPS3-218ENST00000584216 NUDT10Q8NFP7 164 aa8.09□□□□□ -1.11
COPS3-218ENST00000584216 NUDT11Q96G61 164 aa8.09□□□□□ -1.11
COPS3-218ENST00000584216 KANTRA0A1W2PQU2 76 aa8.08□□□□□ -1.12
COPS3-218ENST00000584216 C7orf77A4D0Y5 90 aa8.08□□□□□ -1.12
COPS3-218ENST00000584216 BCL2L11O43521 198 aa8.08□□□□□ -1.12
COPS3-218ENST00000584216 RNF151Q2KHN1 245 aa8.08□□□□□ -1.12
COPS3-218ENST00000584216 ST20Q9HBF5 79 aa8.08□□□□□ -1.12
COPS3-218ENST00000584216 MED9Q9NWA0 146 aa8.08□□□□□ -1.12
COPS3-218ENST00000584216 TSHBP01222 138 aa8.07□□□□□ -1.12
COPS3-218ENST00000584216 TMEM242Q9NWH2 141 aa8.07□□□□□ -1.12
COPS3-218ENST00000584216 TRBV20OR9-2A0A075B6H5 130 aa8.06□□□□□ -1.12
COPS3-218ENST00000584216 F8WDY8 70 aa8.06□□□□□ -1.12
COPS3-218ENST00000584216 IMMP2LQ96T52 175 aa8.06□□□□□ -1.12
COPS3-218ENST00000584216 SPAG11BQ08648 103 aa8.05□□□□□ -1.12
COPS3-218ENST00000584216 OR10D4PQ8NGN7 298 aa8.05□□□□□ -1.12
COPS3-218ENST00000584216 BORCS7Q96B45 105 aa8.05□□□□□ -1.12
COPS3-218ENST00000584216 CSDC2Q9Y534 153 aaKnown RBP8.05□□□□□ -1.12
COPS3-218ENST00000584216 TRBV27A0A0K0K1C4 114 aa8.04□□□□□ -1.12
COPS3-218ENST00000584216 KRTAP9-6A0A140TA67 174 aa8.04□□□□□ -1.12
COPS3-218ENST00000584216 HMSDA8MTL9 139 aa8.04□□□□□ -1.12
COPS3-218ENST00000584216 FOXA3P55318 350 aaPredicted RBP8.04□□□□□ -1.12
COPS3-218ENST00000584216 OPRPNQ99935 248 aaPredicted RBP8.04□□□□□ -1.12
COPS3-218ENST00000584216 RNASE7Q9H1E1 156 aaKnown RBP8.04□□□□□ -1.12
COPS3-218ENST00000584216 MRPL35Q9NZE8 188 aaKnown RBP8.04□□□□□ -1.12
COPS3-218ENST00000584216 TRAV13-1A0A0B4J241 112 aa8.03□□□□□ -1.12
COPS3-218ENST00000584216 KRTAP1-4P0C5Y4 121 aa8.03□□□□□ -1.12
COPS3-218ENST00000584216 FCER1GP30273 86 aa8.03□□□□□ -1.12
COPS3-218ENST00000584216 TAGLN2P37802 199 aaKnown RBP8.03□□□□□ -1.12
COPS3-218ENST00000584216 CARHSP1Q9Y2V2 147 aaKnown RBP8.03□□□□□ -1.12
COPS3-218ENST00000584216 A8MWL6 223 aa8.02□□□□□ -1.13
COPS3-218ENST00000584216 SMLR1H3BR10 107 aa8.02□□□□□ -1.13
COPS3-218ENST00000584216 POLR2KP53803 58 aaKnown RBP8.02□□□□□ -1.13
COPS3-218ENST00000584216 UBE2BP63146 152 aa8.02□□□□□ -1.13
COPS3-218ENST00000584216 C5orf38Q86SI9 138 aa8.02□□□□□ -1.13
COPS3-218ENST00000584216 VCYO14598 125 aa8.01□□□□□ -1.13
COPS3-218ENST00000584216 NDUFA1O15239 70 aa8.01□□□□□ -1.13
COPS3-218ENST00000584216 TMEM241Q24JQ0 296 aa8.01□□□□□ -1.13
COPS3-218ENST00000584216 FAM19A5Q7Z5A7 132 aaPredicted RBP8.01□□□□□ -1.13
COPS3-218ENST00000584216 TMEM18Q96B42 140 aa8.01□□□□□ -1.13
COPS3-218ENST00000584216 UBE2D4Q9Y2X8 147 aa8.01□□□□□ -1.13
COPS3-218ENST00000584216 K7EN84 100 aa8□□□□□ -1.13
COPS3-218ENST00000584216 GATCO43716 136 aaKnown RBP8□□□□□ -1.13
COPS3-218ENST00000584216 PPP1R17O96001 155 aa8□□□□□ -1.13
COPS3-218ENST00000584216 TLX1NBP0CAT3 122 aa8□□□□□ -1.13
COPS3-218ENST00000584216 KIR2DL4Q99706 377 aa8□□□□□ -1.13
COPS3-218ENST00000584216 LCE2AQ5TA79 106 aaPredicted RBP7.99□□□□□ -1.13
COPS3-218ENST00000584216 OCC1Q8TAD7 63 aa7.99□□□□□ -1.13
COPS3-218ENST00000584216 ORAOV1Q8WV07 137 aa7.99□□□□□ -1.13
COPS3-218ENST00000584216 TMEM191AQ9H0A3 160 aa7.99□□□□□ -1.13
COPS3-218ENST00000584216 FAM168BA1KXE4 195 aa7.98□□□□□ -1.13
COPS3-218ENST00000584216 M0QXV9 152 aa7.98□□□□□ -1.13
COPS3-218ENST00000584216 RNASE13Q5GAN3 156 aaKnown RBP7.98□□□□□ -1.13
COPS3-218ENST00000584216 CT83Q5H943 113 aa7.98□□□□□ -1.13
COPS3-218ENST00000584216 FAM231DQ6ZW35 169 aa7.98□□□□□ -1.13
COPS3-218ENST00000584216 TIMM21Q9BVV7 248 aa7.98□□□□□ -1.13
COPS3-218ENST00000584216 A0A1B0GUT8 65 aa7.97□□□□□ -1.13
COPS3-218ENST00000584216 GAGE2EQ4V326 116 aa7.97□□□□□ -1.13
COPS3-218ENST00000584216 Q6ZUT4 128 aa7.97□□□□□ -1.13
COPS3-218ENST00000584216 KRTAP11-1Q8IUC1 163 aa7.97□□□□□ -1.13
COPS3-218ENST00000584216 SMDT1Q9H4I9 107 aa7.97□□□□□ -1.13
COPS3-218ENST00000584216 GAGE2DQ9UEU5 116 aa7.97□□□□□ -1.13
COPS3-218ENST00000584216 FAT4Q6V0I7 4981 aa7.97□□□□□ -1.13
COPS3-218ENST00000584216 PPP1R2P9O14990 202 aa7.96□□□□□ -1.14
COPS3-218ENST00000584216 RAB4AP20338 218 aa7.96□□□□□ -1.14
COPS3-218ENST00000584216 SUMO2P61956 95 aaKnown RBP7.96□□□□□ -1.14
COPS3-218ENST00000584216 RGS21Q2M5E4 152 aa7.96□□□□□ -1.14
COPS3-218ENST00000584216 TCAPO15273 167 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms