RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 FAIMQ9NVQ4 179 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 TRAPPC2LQ9UL33 140 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 HUWE1Q7Z6Z7 4374 aaKnown RBP1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 ALMS1Q8TCU4 4167 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 NBEAL2Q6ZNJ1 2754 aa1.02□□□□□ -2.25
SMCHD1-205ENST00000581383 WNK1Q9H4A3 2382 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 DYNC1H1Q14204 4646 aaKnown RBP1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 CACNA1CQ13936 2221 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 DNAH1Q9P2D7 4330 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 DSPPQ9NZW4 1301 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 TRAV36DV7A0A075B6V5 113 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 TRAV27A0A087WT01 109 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 hDV103S1A0JD37 113 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 C5orf58C9J3I9 102 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 TSTD3H0UI37 97 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 NCR3O14931 201 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 ERC2-IT1O76042 136 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 DBIP07108 87 aaKnown RBP1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 S100A3P33764 101 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 RPS27P42677 84 aaKnown RBP1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 DNAJB13P59910 316 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 PSPHP78330 225 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 DEFB112Q30KQ8 113 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 CCDC153Q494R4 210 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 TEX29Q8N6K0 151 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 FAM216BQ8N7L0 139 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 DEFB108BQ8NET1 73 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 ISOC1Q96CN7 298 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 PPP3R2Q96LZ3 170 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 HYLS1Q96M11 299 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 CCDC115Q96NT0 180 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 TTTY10Q9BZA0 68 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 RERGLQ9H628 205 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 NIT2Q9NQR4 276 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 CCDC167Q9P0B6 97 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 MED31Q9Y3C7 131 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 USF3Q68DE3 2245 aa1.01□□□□□ -2.25
SMCHD1-205ENST00000581383 MYO7BQ6PIF6 2116 aa1□□□□□ -2.25
SMCHD1-205ENST00000581383 CHD3Q12873 2000 aaKnown RBP1□□□□□ -2.25
SMCHD1-205ENST00000581383 C9orf170A2RU37 121 aa1□□□□□ -2.25
SMCHD1-205ENST00000581383 F8W1H4 67 aa1□□□□□ -2.25
SMCHD1-205ENST00000581383 H3BSH0 61 aa1□□□□□ -2.25
SMCHD1-205ENST00000581383 M0R129 80 aa1□□□□□ -2.25
SMCHD1-205ENST00000581383 PIN1P1O15428 100 aa1□□□□□ -2.25
SMCHD1-205ENST00000581383 NUPR1O60356 82 aa1□□□□□ -2.25
SMCHD1-205ENST00000581383 GYPAP02724 150 aa1□□□□□ -2.25
SMCHD1-205ENST00000581383 NBEAP1P0C6P0 100 aa1□□□□□ -2.25
SMCHD1-205ENST00000581383 SDC2P34741 201 aa1□□□□□ -2.25
SMCHD1-205ENST00000581383 POLR2JP52435 117 aaKnown RBP1□□□□□ -2.25
SMCHD1-205ENST00000581383 COPZ1P61923 177 aa1□□□□□ -2.25
SMCHD1-205ENST00000581383 EMX2Q04743 252 aa1□□□□□ -2.25
SMCHD1-205ENST00000581383 OR2T2Q6IF00 324 aa1□□□□□ -2.25
SMCHD1-205ENST00000581383 TOMM20LQ6UXN7 152 aa1□□□□□ -2.25
SMCHD1-205ENST00000581383 ANP32BQ92688 251 aaKnown RBP1□□□□□ -2.25
SMCHD1-205ENST00000581383 LINC00470Q9BZP3 86 aa1□□□□□ -2.25
SMCHD1-205ENST00000581383 TPT1P8Q9HAU6 139 aa1□□□□□ -2.25
SMCHD1-205ENST00000581383 LAMTOR2Q9Y2Q5 125 aa1□□□□□ -2.25
SMCHD1-205ENST00000581383 DNAH10Q8IVF4 4471 aa0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 A0A087WSZ3 146 aa0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 A0A096LPI6 279 aa0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 A0A0G2JND7 137 aa0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 H3BUX3 64 aa0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 FXYD1O00168 92 aa0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 CDC42EP2O14613 210 aa0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 FAM107AO95990 144 aa0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 GYPBP06028 91 aa0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 IFI6P09912 130 aa0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 PIPP12273 146 aaPredicted RBP0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 CCL3L1P16619 93 aa0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 FXYD6P3P58550 94 aa0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 OR8B8Q15620 311 aa0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 GLYATL3Q5SZD4 288 aa0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 KRTAP26-1Q6PEX3 210 aa0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 C10orf99Q6UWK7 81 aa0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 VMO1Q7Z5L0 202 aa0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 ARPINQ7Z6K5 226 aa0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 TEN1Q86WV5 123 aa0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 OR9Q1Q8NGQ5 310 aa0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 DNAH11Q96DT5 4516 aa0.99□□□□□ -2.25
SMCHD1-205ENST00000581383 LOC107984640A0A0U1RRK4 108 aa0.98□□□□□ -2.25
SMCHD1-205ENST00000581383 CLPSL1A2RUU4 121 aa0.98□□□□□ -2.25
SMCHD1-205ENST00000581383 A6NIN4 97 aa0.98□□□□□ -2.25
SMCHD1-205ENST00000581383 H3BQF6 201 aa0.98□□□□□ -2.25
SMCHD1-205ENST00000581383 H3BRM9 83 aa0.98□□□□□ -2.25
SMCHD1-205ENST00000581383 K7EIL1 84 aa0.98□□□□□ -2.25
SMCHD1-205ENST00000581383 TSPAN19P0C672 248 aa0.98□□□□□ -2.25
SMCHD1-205ENST00000581383 DEFA5Q01523 94 aa0.98□□□□□ -2.25
SMCHD1-205ENST00000581383 DEFB136Q30KP8 78 aa0.98□□□□□ -2.25
SMCHD1-205ENST00000581383 C10orf128Q5T292 105 aa0.98□□□□□ -2.25
SMCHD1-205ENST00000581383 LINC00305Q7Z4B0 112 aa0.98□□□□□ -2.25
SMCHD1-205ENST00000581383 Q8N6K4 173 aa0.98□□□□□ -2.25
SMCHD1-205ENST00000581383 OR5H6Q8NGV6 325 aa0.98□□□□□ -2.25
SMCHD1-205ENST00000581383 DIRC1Q969H9 104 aa0.98□□□□□ -2.25
SMCHD1-205ENST00000581383 GAFA1Q96PS6 74 aa0.98□□□□□ -2.25
SMCHD1-205ENST00000581383 CGREF1Q99674 301 aa0.98□□□□□ -2.25
SMCHD1-205ENST00000581383 FAM107BQ9H098 131 aa0.98□□□□□ -2.25
SMCHD1-205ENST00000581383 C19orf12Q9NSK7 152 aa0.98□□□□□ -2.25
SMCHD1-205ENST00000581383 CALML5Q9NZT1 146 aa0.98□□□□□ -2.25
SMCHD1-205ENST00000581383 TNFSF18Q9UNG2 199 aa0.98□□□□□ -2.25
SMCHD1-205ENST00000581383 IER3IP1Q9Y5U9 82 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms