RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 TMEM101Q96IK0 257 aa6.6□□□□□ -1.35
RFFL-209ENST00000581265 TMEM250H0YL14 139 aa6.59□□□□□ -1.35
RFFL-209ENST00000581265 CCL25O15444 150 aa6.59□□□□□ -1.35
RFFL-209ENST00000581265 CD164L2Q6UWJ8 174 aa6.59□□□□□ -1.35
RFFL-209ENST00000581265 MRPL52Q86TS9 123 aaKnown RBP6.59□□□□□ -1.35
RFFL-209ENST00000581265 LINC00526Q96FQ7 95 aa6.59□□□□□ -1.35
RFFL-209ENST00000581265 CDC42SE2Q9NRR3 84 aa6.59□□□□□ -1.35
RFFL-209ENST00000581265 GATCO43716 136 aaKnown RBP6.58□□□□□ -1.36
RFFL-209ENST00000581265 TSHBP01222 138 aa6.58□□□□□ -1.36
RFFL-209ENST00000581265 POLR2KP53803 58 aaKnown RBP6.58□□□□□ -1.36
RFFL-209ENST00000581265 SYCNQ0VAF6 134 aa6.58□□□□□ -1.36
RFFL-209ENST00000581265 SS18Q15532 418 aa6.58□□□□□ -1.36
RFFL-209ENST00000581265 CT83Q5H943 113 aa6.58□□□□□ -1.36
RFFL-209ENST00000581265 REG3GQ6UW15 175 aa6.58□□□□□ -1.36
RFFL-209ENST00000581265 Q6ZRP5 223 aa6.58□□□□□ -1.36
RFFL-209ENST00000581265 TCTE3Q8IZS6 198 aa6.58□□□□□ -1.36
RFFL-209ENST00000581265 ZNF664Q8N3J9 261 aa6.58□□□□□ -1.36
RFFL-209ENST00000581265 MRAP2Q96G30 205 aa6.58□□□□□ -1.36
RFFL-209ENST00000581265 CARD19Q96LW7 228 aa6.58□□□□□ -1.36
RFFL-209ENST00000581265 ST20Q9HBF5 79 aa6.58□□□□□ -1.36
RFFL-209ENST00000581265 TRBV27A0A0K0K1C4 114 aa6.57□□□□□ -1.36
RFFL-209ENST00000581265 ZNF561-AS1K7EIQ3 104 aa6.57□□□□□ -1.36
RFFL-209ENST00000581265 ODF1Q14990 250 aa6.57□□□□□ -1.36
RFFL-209ENST00000581265 TMEM191AQ9H0A3 160 aa6.57□□□□□ -1.36
RFFL-209ENST00000581265 A0A0U1RQV1 116 aa6.56□□□□□ -1.36
RFFL-209ENST00000581265 TMEM242Q9NWH2 141 aa6.56□□□□□ -1.36
RFFL-209ENST00000581265 A0A1B0GUT8 65 aa6.55□□□□□ -1.36
RFFL-209ENST00000581265 C7orf77A4D0Y5 90 aa6.55□□□□□ -1.36
RFFL-209ENST00000581265 C1orf196B1AJZ1 125 aa6.55□□□□□ -1.36
RFFL-209ENST00000581265 RAB4AP20338 218 aa6.55□□□□□ -1.36
RFFL-209ENST00000581265 CAMPP49913 170 aa6.55□□□□□ -1.36
RFFL-209ENST00000581265 PTTG1IPP53801 180 aa6.55□□□□□ -1.36
RFFL-209ENST00000581265 TSKUQ8WUA8 353 aa6.55□□□□□ -1.36
RFFL-209ENST00000581265 BORCS7Q96B45 105 aa6.55□□□□□ -1.36
RFFL-209ENST00000581265 CSDC2Q9Y534 153 aaKnown RBP6.55□□□□□ -1.36
RFFL-209ENST00000581265 LOC107984640A0A0U1RRK4 108 aa6.54□□□□□ -1.36
RFFL-209ENST00000581265 HIGD1CA8MV81 97 aa6.54□□□□□ -1.36
RFFL-209ENST00000581265 VCYO14598 125 aa6.54□□□□□ -1.36
RFFL-209ENST00000581265 BLOC1S1P78537 153 aa6.54□□□□□ -1.36
RFFL-209ENST00000581265 ISOC2Q96AB3 205 aa6.54□□□□□ -1.36
RFFL-209ENST00000581265 IGLV4-69A0A075B6H9 119 aa6.53□□□□□ -1.36
RFFL-209ENST00000581265 A0A1W2PNN7 141 aa6.53□□□□□ -1.36
RFFL-209ENST00000581265 COX7A2LO14548 114 aa6.53□□□□□ -1.36
RFFL-209ENST00000581265 MALP21145 153 aa6.53□□□□□ -1.36
RFFL-209ENST00000581265 GAGE2BQ13066 116 aa6.53□□□□□ -1.36
RFFL-209ENST00000581265 AMN1Q8IY45 258 aa6.53□□□□□ -1.36
RFFL-209ENST00000581265 NUP35Q8NFH5 326 aa6.53□□□□□ -1.36
RFFL-209ENST00000581265 APOMO95445 188 aa6.52□□□□□ -1.37
RFFL-209ENST00000581265 PPP1R17O96001 155 aa6.52□□□□□ -1.37
RFFL-209ENST00000581265 SMAGPQ0VAQ4 97 aa6.52□□□□□ -1.37
RFFL-209ENST00000581265 LINC01551Q86U37 167 aa6.52□□□□□ -1.37
RFFL-209ENST00000581265 C2orf48Q96LS8 159 aa6.52□□□□□ -1.37
RFFL-209ENST00000581265 OSTCQ9NRP0 149 aa6.52□□□□□ -1.37
RFFL-209ENST00000581265 UBE2D4Q9Y2X8 147 aa6.52□□□□□ -1.37
RFFL-209ENST00000581265 FCER1GP30273 86 aa6.51□□□□□ -1.37
RFFL-209ENST00000581265 CEBPGP53567 150 aa6.51□□□□□ -1.37
RFFL-209ENST00000581265 SUMO2P61956 95 aaKnown RBP6.51□□□□□ -1.37
RFFL-209ENST00000581265 C9orf116Q5BN46 136 aaPredicted RBP6.51□□□□□ -1.37
RFFL-209ENST00000581265 ALKAL2Q6UX46 152 aa6.51□□□□□ -1.37
RFFL-209ENST00000581265 NRACQ8N912 160 aa6.51□□□□□ -1.37
RFFL-209ENST00000581265 CAMK2N2Q96S95 79 aa6.51□□□□□ -1.37
RFFL-209ENST00000581265 SMIM7Q9BQ49 75 aa6.51□□□□□ -1.37
RFFL-209ENST00000581265 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.5□□□□□ -1.37
RFFL-209ENST00000581265 RIGQ13278 110 aa6.5□□□□□ -1.37
RFFL-209ENST00000581265 RNF151Q2KHN1 245 aa6.5□□□□□ -1.37
RFFL-209ENST00000581265 KIR2DL4Q99706 377 aa6.5□□□□□ -1.37
RFFL-209ENST00000581265 TIMM21Q9BVV7 248 aa6.5□□□□□ -1.37
RFFL-209ENST00000581265 PSORS1C2Q9UIG4 136 aa6.5□□□□□ -1.37
RFFL-209ENST00000581265 TRAV13-1A0A0B4J241 112 aa6.49□□□□□ -1.37
RFFL-209ENST00000581265 ZNF727A8MUV8 499 aa6.49□□□□□ -1.37
RFFL-209ENST00000581265 SMKR1H3BMG3 65 aa6.49□□□□□ -1.37
RFFL-209ENST00000581265 RNASE13Q5GAN3 156 aaKnown RBP6.49□□□□□ -1.37
RFFL-209ENST00000581265 C5orf38Q86SI9 138 aa6.49□□□□□ -1.37
RFFL-209ENST00000581265 EIF5A2Q9GZV4 153 aaKnown RBP6.49□□□□□ -1.37
RFFL-209ENST00000581265 V9GYV3 84 aa6.49□□□□□ -1.37
RFFL-209ENST00000581265 PPP1R2P9O14990 202 aa6.48□□□□□ -1.37
RFFL-209ENST00000581265 MT-ND6P03923 174 aa6.48□□□□□ -1.37
RFFL-209ENST00000581265 FAM104BQ5XKR9 115 aa6.48□□□□□ -1.37
RFFL-209ENST00000581265 TMEM18Q96B42 140 aa6.48□□□□□ -1.37
RFFL-209ENST00000581265 TRBV24-1A0A075B6N3 115 aa6.47□□□□□ -1.37
RFFL-209ENST00000581265 LINC00862A6NCI5 91 aa6.47□□□□□ -1.37
RFFL-209ENST00000581265 F8WDY8 70 aa6.47□□□□□ -1.37
RFFL-209ENST00000581265 SRP19P09132 144 aaKnown RBP6.47□□□□□ -1.37
RFFL-209ENST00000581265 RPL32P62910 135 aaKnown RBP6.47□□□□□ -1.37
RFFL-209ENST00000581265 MRPL51Q4U2R6 128 aaKnown RBP6.47□□□□□ -1.37
RFFL-209ENST00000581265 Q6ZUT4 128 aa6.47□□□□□ -1.37
RFFL-209ENST00000581265 OR10D4PQ8NGN7 298 aa6.47□□□□□ -1.37
RFFL-209ENST00000581265 OPRPNQ99935 248 aaPredicted RBP6.47□□□□□ -1.37
RFFL-209ENST00000581265 C20orf78Q9BR46 151 aa6.47□□□□□ -1.37
RFFL-209ENST00000581265 MRPL35Q9NZE8 188 aaKnown RBP6.47□□□□□ -1.37
RFFL-209ENST00000581265 NAT8BQ9UHF3 227 aa6.47□□□□□ -1.37
RFFL-209ENST00000581265 IGHV3OR16-9A0A0B4J2B5 98 aa6.46□□□□□ -1.38
RFFL-209ENST00000581265 RPL18AQ02543 176 aaKnown RBP6.46□□□□□ -1.38
RFFL-209ENST00000581265 SPAG11BQ08648 103 aa6.46□□□□□ -1.38
RFFL-209ENST00000581265 C1orf137Q5JT78 98 aa6.46□□□□□ -1.38
RFFL-209ENST00000581265 PHF5AQ7RTV0 110 aaKnown RBP6.46□□□□□ -1.38
RFFL-209ENST00000581265 FAM104AQ969W3 186 aa6.46□□□□□ -1.38
RFFL-209ENST00000581265 IMMP2LQ96T52 175 aa6.46□□□□□ -1.38
RFFL-209ENST00000581265 TCAPO15273 167 aa6.45□□□□□ -1.38
RFFL-209ENST00000581265 IGLV7-43P04211 117 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms