RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 Q8N1X5 172 aa8.65□□□□□ -1.02
NUP85-215ENST00000580879 PRELID3AQ96N28 172 aa8.65□□□□□ -1.02
NUP85-215ENST00000580879 SMIM2Q9BVW6 85 aa8.65□□□□□ -1.02
NUP85-215ENST00000580879 SEC11CQ9BY50 192 aa8.65□□□□□ -1.02
NUP85-215ENST00000580879 PPBPP02775 128 aa8.64□□□□□ -1.03
NUP85-215ENST00000580879 MRPL52Q86TS9 123 aaKnown RBP8.64□□□□□ -1.03
NUP85-215ENST00000580879 ORMDL3Q8N138 153 aa8.64□□□□□ -1.03
NUP85-215ENST00000580879 CHCHD10Q8WYQ3 142 aaPredicted RBP8.64□□□□□ -1.03
NUP85-215ENST00000580879 TCAPO15273 167 aa8.63□□□□□ -1.03
NUP85-215ENST00000580879 SMR3BP02814 79 aaPredicted RBP8.63□□□□□ -1.03
NUP85-215ENST00000580879 RPL32P62910 135 aaKnown RBP8.63□□□□□ -1.03
NUP85-215ENST00000580879 RNASE13Q5GAN3 156 aaKnown RBP8.63□□□□□ -1.03
NUP85-215ENST00000580879 DGAT2L7PQ6IED9 249 aa8.63□□□□□ -1.03
NUP85-215ENST00000580879 CTDSP1Q9GZU7 261 aa8.63□□□□□ -1.03
NUP85-215ENST00000580879 CDC42SE2Q9NRR3 84 aa8.63□□□□□ -1.03
NUP85-215ENST00000580879 PHOX2AO14813 284 aa8.62□□□□□ -1.03
NUP85-215ENST00000580879 XCL1P47992 114 aa8.62□□□□□ -1.03
NUP85-215ENST00000580879 ZNF664Q8N3J9 261 aa8.62□□□□□ -1.03
NUP85-215ENST00000580879 IMMP2LQ96T52 175 aa8.62□□□□□ -1.03
NUP85-215ENST00000580879 UBE2D4Q9Y2X8 147 aa8.62□□□□□ -1.03
NUP85-215ENST00000580879 LOC389332A0A1B0GUA5 103 aa8.61□□□□□ -1.03
NUP85-215ENST00000580879 LINC00959A0A1B0GUT2 108 aa8.61□□□□□ -1.03
NUP85-215ENST00000580879 hDV102S1A0JD36 115 aa8.61□□□□□ -1.03
NUP85-215ENST00000580879 RPL39P62891 51 aaKnown RBP8.61□□□□□ -1.03
NUP85-215ENST00000580879 CCL25O15444 150 aa8.6□□□□□ -1.03
NUP85-215ENST00000580879 FOXI1Q12951 378 aa8.6□□□□□ -1.03
NUP85-215ENST00000580879 C10orf91Q5T1B1 145 aa8.6□□□□□ -1.03
NUP85-215ENST00000580879 Q6ZSA8 131 aa8.6□□□□□ -1.03
NUP85-215ENST00000580879 Q6ZUT4 128 aa8.6□□□□□ -1.03
NUP85-215ENST00000580879 C15orf56Q8N910 161 aa8.6□□□□□ -1.03
NUP85-215ENST00000580879 CLRN3Q8NCR9 226 aa8.6□□□□□ -1.03
NUP85-215ENST00000580879 CARHSP1Q9Y2V2 147 aaKnown RBP8.6□□□□□ -1.03
NUP85-215ENST00000580879 HIGD2BQ4VC39 106 aa8.59□□□□□ -1.03
NUP85-215ENST00000580879 TMEM18Q96B42 140 aa8.59□□□□□ -1.03
NUP85-215ENST00000580879 RPS10P5Q9NQ39 176 aa8.59□□□□□ -1.03
NUP85-215ENST00000580879 EPM2AB3EWF7 344 aa8.58□□□□□ -1.04
NUP85-215ENST00000580879 RAB5AP20339 215 aa8.58□□□□□ -1.04
NUP85-215ENST00000580879 S100PP25815 95 aa8.58□□□□□ -1.04
NUP85-215ENST00000580879 SMAGPQ0VAQ4 97 aa8.58□□□□□ -1.04
NUP85-215ENST00000580879 SS18Q15532 418 aa8.58□□□□□ -1.04
NUP85-215ENST00000580879 KIAA1644Q3SXP7 199 aa8.58□□□□□ -1.04
NUP85-215ENST00000580879 OPRPNQ99935 248 aaPredicted RBP8.58□□□□□ -1.04
NUP85-215ENST00000580879 MAP1LC3AQ9H492 121 aa8.58□□□□□ -1.04
NUP85-215ENST00000580879 CSDC2Q9Y534 153 aaKnown RBP8.58□□□□□ -1.04
NUP85-215ENST00000580879 VPS13BQ7Z7G8 4022 aa8.57□□□□□ -1.04
NUP85-215ENST00000580879 TRAV9-1A0A075B6T8 112 aa8.57□□□□□ -1.04
NUP85-215ENST00000580879 TRAV13-1A0A0B4J241 112 aa8.57□□□□□ -1.04
NUP85-215ENST00000580879 SLPIP03973 132 aa8.57□□□□□ -1.04
NUP85-215ENST00000580879 Q5VSD8 79 aa8.57□□□□□ -1.04
NUP85-215ENST00000580879 CFAP161Q6P656 301 aa8.57□□□□□ -1.04
NUP85-215ENST00000580879 SCXQ7RTU7 201 aa8.57□□□□□ -1.04
NUP85-215ENST00000580879 C9orf163Q8N9P6 203 aa8.57□□□□□ -1.04
NUP85-215ENST00000580879 TIMM21Q9BVV7 248 aa8.57□□□□□ -1.04
NUP85-215ENST00000580879 AP5S1Q9NUS5 200 aa8.57□□□□□ -1.04
NUP85-215ENST00000580879 LAMTOR2Q9Y2Q5 125 aa8.57□□□□□ -1.04
NUP85-215ENST00000580879 PRSS47A8MTI9 375 aa8.56□□□□□ -1.04
NUP85-215ENST00000580879 APOC3P02656 99 aa8.56□□□□□ -1.04
NUP85-215ENST00000580879 CNBPP62633 177 aaKnown RBP8.56□□□□□ -1.04
NUP85-215ENST00000580879 RHEBQ15382 184 aa8.56□□□□□ -1.04
NUP85-215ENST00000580879 FAM104AQ969W3 186 aa8.56□□□□□ -1.04
NUP85-215ENST00000580879 CD164L2Q6UWJ8 174 aa8.55□□□□□ -1.04
NUP85-215ENST00000580879 Q8N8P6 123 aa8.55□□□□□ -1.04
NUP85-215ENST00000580879 LINC00526Q96FQ7 95 aa8.55□□□□□ -1.04
NUP85-215ENST00000580879 SPANXA1Q9NS26 97 aa8.55□□□□□ -1.04
NUP85-215ENST00000580879 C1orf196B1AJZ1 125 aa8.54□□□□□ -1.04
NUP85-215ENST00000580879 CHAC1Q9BUX1 264 aa8.54□□□□□ -1.04
NUP85-215ENST00000580879 GVQW2A0A096LPI5 108 aaPredicted RBP8.53□□□□□ -1.04
NUP85-215ENST00000580879 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.53□□□□□ -1.04
NUP85-215ENST00000580879 PANO1I0J062 215 aa8.53□□□□□ -1.04
NUP85-215ENST00000580879 IFI27P40305 119 aaPredicted RBP8.53□□□□□ -1.04
NUP85-215ENST00000580879 SDIM1Q6ZPB5 146 aa8.53□□□□□ -1.04
NUP85-215ENST00000580879 CIRBP-AS1Q8TBR5 109 aa8.53□□□□□ -1.04
NUP85-215ENST00000580879 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.53□□□□□ -1.04
NUP85-215ENST00000580879 IGHV1-58A0A0C4DH39 117 aa8.52□□□□□ -1.05
NUP85-215ENST00000580879 IFITM10A6NMD0 228 aa8.52□□□□□ -1.05
NUP85-215ENST00000580879 FAM229AH3BQW9 127 aa8.52□□□□□ -1.05
NUP85-215ENST00000580879 COX7A2LO14548 114 aa8.52□□□□□ -1.05
NUP85-215ENST00000580879 MRPS36P82909 103 aaKnown RBP8.52□□□□□ -1.05
NUP85-215ENST00000580879 C5orf38Q86SI9 138 aa8.52□□□□□ -1.05
NUP85-215ENST00000580879 GNB1LQ9BYB4 327 aa8.52□□□□□ -1.05
NUP85-215ENST00000580879 SRRM2Q9UQ35 2752 aaKnown RBP8.51□□□□□ -1.05
NUP85-215ENST00000580879 IGHV3-64A0A075B6Q5 118 aa8.51□□□□□ -1.05
NUP85-215ENST00000580879 TGIF2-C20orf24A0A0A6YYL0 155 aa8.51□□□□□ -1.05
NUP85-215ENST00000580879 MALP21145 153 aa8.51□□□□□ -1.05
NUP85-215ENST00000580879 NDUFA5Q16718 116 aa8.51□□□□□ -1.05
NUP85-215ENST00000580879 C2orf66Q6UXQ4 117 aa8.51□□□□□ -1.05
NUP85-215ENST00000580879 LINC00528Q8N1L1 170 aa8.51□□□□□ -1.05
NUP85-215ENST00000580879 MRPL18Q9H0U6 180 aaKnown RBP8.51□□□□□ -1.05
NUP85-215ENST00000580879 NXT2Q9NPJ8 142 aaKnown RBP8.51□□□□□ -1.05
NUP85-215ENST00000580879 CYSLTR1Q9Y271 337 aa8.51□□□□□ -1.05
NUP85-215ENST00000580879 IGLV4-3A0A075B6K6 122 aa8.5□□□□□ -1.05
NUP85-215ENST00000580879 CHTF8P0CG12 524 aa8.5□□□□□ -1.05
NUP85-215ENST00000580879 FABP9Q0Z7S8 132 aa8.5□□□□□ -1.05
NUP85-215ENST00000580879 ORMDL2Q53FV1 153 aa8.5□□□□□ -1.05
NUP85-215ENST00000580879 ZC2HC1BQ5TFG8 222 aa8.5□□□□□ -1.05
NUP85-215ENST00000580879 SVBPQ8N300 66 aa8.5□□□□□ -1.05
NUP85-215ENST00000580879 ALKBH7Q9BT30 221 aaPredicted RBP8.5□□□□□ -1.05
NUP85-215ENST00000580879 PYGO1Q9Y3Y4 419 aa8.5□□□□□ -1.05
NUP85-215ENST00000580879 SNAPINO95295 136 aa8.49□□□□□ -1.05
NUP85-215ENST00000580879 ZNF561-AS1K7EIQ3 104 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms