RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 RPL18AQ02543 176 aaKnown RBP11.51□□□□□ -0.57
NDEL1-209ENST00000580738 CAMK2N2Q96S95 79 aa11.51□□□□□ -0.57
NDEL1-209ENST00000580738 CNFNQ9BYD5 112 aa11.51□□□□□ -0.57
NDEL1-209ENST00000580738 CDC42SE2Q9NRR3 84 aa11.51□□□□□ -0.57
NDEL1-209ENST00000580738 IGLV1-50A0A075B6I6 118 aa11.5□□□□□ -0.57
NDEL1-209ENST00000580738 KRTAP1-4P0C5Y4 121 aa11.5□□□□□ -0.57
NDEL1-209ENST00000580738 ESDP10768 282 aa11.5□□□□□ -0.57
NDEL1-209ENST00000580738 PMCHP20382 165 aa11.5□□□□□ -0.57
NDEL1-209ENST00000580738 GNG4P50150 75 aa11.5□□□□□ -0.57
NDEL1-209ENST00000580738 GNG13Q9P2W3 67 aa11.5□□□□□ -0.57
NDEL1-209ENST00000580738 TRBV20OR9-2A0A075B6H5 130 aa11.49□□□□□ -0.57
NDEL1-209ENST00000580738 I3L3M4 83 aa11.49□□□□□ -0.57
NDEL1-209ENST00000580738 MALP21145 153 aa11.49□□□□□ -0.57
NDEL1-209ENST00000580738 EIF5AP63241 154 aaKnown RBP11.49□□□□□ -0.57
NDEL1-209ENST00000580738 EIF5AL1Q6IS14 154 aaKnown RBP11.49□□□□□ -0.57
NDEL1-209ENST00000580738 OPRPNQ99935 248 aaPredicted RBP11.49□□□□□ -0.57
NDEL1-209ENST00000580738 A0A087WZ39 114 aa11.48□□□□□ -0.57
NDEL1-209ENST00000580738 TSHBP01222 138 aa11.48□□□□□ -0.57
NDEL1-209ENST00000580738 NUDT10Q8NFP7 164 aa11.48□□□□□ -0.57
NDEL1-209ENST00000580738 SMIM12Q96EX1 92 aa11.48□□□□□ -0.57
NDEL1-209ENST00000580738 NUDT11Q96G61 164 aa11.48□□□□□ -0.57
NDEL1-209ENST00000580738 COX7A2LO14548 114 aa11.47□□□□□ -0.57
NDEL1-209ENST00000580738 BCL2L11O43521 198 aa11.47□□□□□ -0.57
NDEL1-209ENST00000580738 MANBALQ9NQG1 85 aa11.47□□□□□ -0.57
NDEL1-209ENST00000580738 SMLR1H3BR10 107 aa11.46□□□□□ -0.57
NDEL1-209ENST00000580738 MRPL52Q86TS9 123 aaKnown RBP11.46□□□□□ -0.57
NDEL1-209ENST00000580738 MRAP2Q96G30 205 aa11.46□□□□□ -0.57
NDEL1-209ENST00000580738 TMEM242Q9NWH2 141 aa11.46□□□□□ -0.57
NDEL1-209ENST00000580738 FAM168BA1KXE4 195 aa11.45□□□□□ -0.58
NDEL1-209ENST00000580738 TEX261Q6UWH6 196 aa11.45□□□□□ -0.58
NDEL1-209ENST00000580738 C2orf48Q96LS8 159 aa11.45□□□□□ -0.58
NDEL1-209ENST00000580738 TRBV6-5A0A0K0K1A5 114 aa11.44□□□□□ -0.58
NDEL1-209ENST00000580738 RNASE7Q9H1E1 156 aaKnown RBP11.44□□□□□ -0.58
NDEL1-209ENST00000580738 C1orf196B1AJZ1 125 aa11.43□□□□□ -0.58
NDEL1-209ENST00000580738 UBE2D1P51668 147 aa11.43□□□□□ -0.58
NDEL1-209ENST00000580738 SMIM15Q7Z3B0 74 aa11.43□□□□□ -0.58
NDEL1-209ENST00000580738 RPP21Q9H633 154 aaKnown RBP11.43□□□□□ -0.58
NDEL1-209ENST00000580738 BIN3Q9NQY0 253 aa11.43□□□□□ -0.58
NDEL1-209ENST00000580738 C5orf38Q86SI9 138 aa11.42□□□□□ -0.58
NDEL1-209ENST00000580738 MED9Q9NWA0 146 aa11.42□□□□□ -0.58
NDEL1-209ENST00000580738 TRAV1-1A0A0B4J248 108 aa11.41□□□□□ -0.58
NDEL1-209ENST00000580738 RNF151Q2KHN1 245 aa11.41□□□□□ -0.58
NDEL1-209ENST00000580738 RNASE13Q5GAN3 156 aaKnown RBP11.41□□□□□ -0.58
NDEL1-209ENST00000580738 ST20Q9HBF5 79 aa11.41□□□□□ -0.58
NDEL1-209ENST00000580738 SPAG11BQ08648 103 aa11.4□□□□□ -0.58
NDEL1-209ENST00000580738 ZNF345Q14585 488 aa11.4□□□□□ -0.58
NDEL1-209ENST00000580738 TRAV13-1A0A0B4J241 112 aa11.39□□□□□ -0.59
NDEL1-209ENST00000580738 C7orf77A4D0Y5 90 aa11.39□□□□□ -0.59
NDEL1-209ENST00000580738 PDE6DO43924 150 aa11.39□□□□□ -0.59
NDEL1-209ENST00000580738 RPL13AP40429 203 aaKnown RBP11.39□□□□□ -0.59
NDEL1-209ENST00000580738 FAM19A5Q7Z5A7 132 aaPredicted RBP11.39□□□□□ -0.59
NDEL1-209ENST00000580738 TSKUQ8WUA8 353 aa11.39□□□□□ -0.59
NDEL1-209ENST00000580738 K7EN84 100 aa11.38□□□□□ -0.59
NDEL1-209ENST00000580738 TSPAN13O95857 204 aa11.38□□□□□ -0.59
NDEL1-209ENST00000580738 POLR2KP53803 58 aaKnown RBP11.38□□□□□ -0.59
NDEL1-209ENST00000580738 KRTAP7-1Q8IUC3 87 aa11.38□□□□□ -0.59
NDEL1-209ENST00000580738 TRBV27A0A0K0K1C4 114 aa11.36□□□□□ -0.59
NDEL1-209ENST00000580738 OCC1Q8TAD7 63 aa11.36□□□□□ -0.59
NDEL1-209ENST00000580738 FAM210AQ96ND0 272 aa11.36□□□□□ -0.59
NDEL1-209ENST00000580738 C10orf25Q5T742 122 aa11.35□□□□□ -0.59
NDEL1-209ENST00000580738 MRPL35Q9NZE8 188 aaKnown RBP11.35□□□□□ -0.59
NDEL1-209ENST00000580738 UBE2D4Q9Y2X8 147 aa11.35□□□□□ -0.59
NDEL1-209ENST00000580738 KANTRA0A1W2PQU2 76 aa11.34□□□□□ -0.59
NDEL1-209ENST00000580738 IMMP2LQ96T52 175 aa11.34□□□□□ -0.59
NDEL1-209ENST00000580738 CSDC2Q9Y534 153 aaKnown RBP11.34□□□□□ -0.59
NDEL1-209ENST00000580738 GAGE2EQ4V326 116 aa11.33□□□□□ -0.6
NDEL1-209ENST00000580738 OR10D4PQ8NGN7 298 aa11.33□□□□□ -0.6
NDEL1-209ENST00000580738 GAGE2DQ9UEU5 116 aa11.33□□□□□ -0.6
NDEL1-209ENST00000580738 CARHSP1Q9Y2V2 147 aaKnown RBP11.33□□□□□ -0.6
NDEL1-209ENST00000580738 UBE2BP63146 152 aa11.32□□□□□ -0.6
NDEL1-209ENST00000580738 UNQ6190/PRO20217Q6UXQ8 127 aa11.32□□□□□ -0.6
NDEL1-209ENST00000580738 Q6ZUT4 128 aa11.32□□□□□ -0.6
NDEL1-209ENST00000580738 ORAOV1Q8WV07 137 aa11.32□□□□□ -0.6
NDEL1-209ENST00000580738 HMSDA8MTL9 139 aa11.31□□□□□ -0.6
NDEL1-209ENST00000580738 M0QXV9 152 aa11.31□□□□□ -0.6
NDEL1-209ENST00000580738 TLX1NBP0CAT3 122 aa11.31□□□□□ -0.6
NDEL1-209ENST00000580738 FCER1GP30273 86 aa11.31□□□□□ -0.6
NDEL1-209ENST00000580738 C6orf48Q9UBA6 75 aa11.31□□□□□ -0.6
NDEL1-209ENST00000580738 TEX46H3BTG2 121 aa11.3□□□□□ -0.6
NDEL1-209ENST00000580738 NDUFA1O15239 70 aa11.3□□□□□ -0.6
NDEL1-209ENST00000580738 VCYO14598 125 aa11.29□□□□□ -0.6
NDEL1-209ENST00000580738 GATCO43716 136 aaKnown RBP11.29□□□□□ -0.6
NDEL1-209ENST00000580738 RAB4AP20338 218 aa11.29□□□□□ -0.6
NDEL1-209ENST00000580738 SMDT1Q9H4I9 107 aa11.29□□□□□ -0.6
NDEL1-209ENST00000580738 F8WDY8 70 aa11.28□□□□□ -0.6
NDEL1-209ENST00000580738 SMKR1H3BMG3 65 aa11.28□□□□□ -0.6
NDEL1-209ENST00000580738 TMEM241Q24JQ0 296 aa11.28□□□□□ -0.6
NDEL1-209ENST00000580738 TMEM191AQ9H0A3 160 aa11.28□□□□□ -0.6
NDEL1-209ENST00000580738 A8MWL6 223 aa11.27□□□□□ -0.61
NDEL1-209ENST00000580738 AMN1Q8IY45 258 aa11.27□□□□□ -0.61
NDEL1-209ENST00000580738 IGHV3OR16-9A0A0B4J2B5 98 aa11.26□□□□□ -0.61
NDEL1-209ENST00000580738 ZNF861PO60384 105 aa11.26□□□□□ -0.61
NDEL1-209ENST00000580738 SMAGPQ0VAQ4 97 aa11.26□□□□□ -0.61
NDEL1-209ENST00000580738 A0A087X002 238 aa11.25□□□□□ -0.61
NDEL1-209ENST00000580738 FAM104AQ969W3 186 aa11.25□□□□□ -0.61
NDEL1-209ENST00000580738 TIMM21Q9BVV7 248 aa11.25□□□□□ -0.61
NDEL1-209ENST00000580738 FAM231DQ6ZW35 169 aa11.24□□□□□ -0.61
NDEL1-209ENST00000580738 NRACQ8N912 160 aa11.24□□□□□ -0.61
NDEL1-209ENST00000580738 BORCS7Q96B45 105 aa11.24□□□□□ -0.61
NDEL1-209ENST00000580738 A0A1B0GUT8 65 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms