RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 Q75L30 129 aa4.5□□□□□ -1.69
SMARCE1-217ENST00000580654 C5orf17Q8NAS9 161 aa4.5□□□□□ -1.69
SMARCE1-217ENST00000580654 CARD19Q96LW7 228 aa4.5□□□□□ -1.69
SMARCE1-217ENST00000580654 RETNLBQ9BQ08 111 aa4.5□□□□□ -1.69
SMARCE1-217ENST00000580654 SEC22CQ9BRL7 303 aa4.5□□□□□ -1.69
SMARCE1-217ENST00000580654 KCNIP2Q9NS61 270 aa4.5□□□□□ -1.69
SMARCE1-217ENST00000580654 C17orf112F2Z3M2 114 aa4.49□□□□□ -1.69
SMARCE1-217ENST00000580654 LINC00614P0C842 121 aa4.49□□□□□ -1.69
SMARCE1-217ENST00000580654 TPT1P13693 172 aaKnown RBP4.49□□□□□ -1.69
SMARCE1-217ENST00000580654 BTCP35070 178 aa4.49□□□□□ -1.69
SMARCE1-217ENST00000580654 SULT1A2P50226 295 aa4.49□□□□□ -1.69
SMARCE1-217ENST00000580654 FOXI1Q12951 378 aa4.49□□□□□ -1.69
SMARCE1-217ENST00000580654 C9orf116Q5BN46 136 aaPredicted RBP4.49□□□□□ -1.69
SMARCE1-217ENST00000580654 MRPL52Q86TS9 123 aaKnown RBP4.49□□□□□ -1.69
SMARCE1-217ENST00000580654 CHCHD10Q8WYQ3 142 aaPredicted RBP4.49□□□□□ -1.69
SMARCE1-217ENST00000580654 ARL2-SNX15V9GYD0 113 aa4.49□□□□□ -1.69
SMARCE1-217ENST00000580654 TMSB15BA0A087X1C1 80 aa4.48□□□□□ -1.69
SMARCE1-217ENST00000580654 IGKV3OR2-268A0A0C4DH90 116 aa4.48□□□□□ -1.69
SMARCE1-217ENST00000580654 HMGB3O15347 200 aaKnown RBP4.48□□□□□ -1.69
SMARCE1-217ENST00000580654 SSNA1O43805 119 aa4.48□□□□□ -1.69
SMARCE1-217ENST00000580654 TAL2Q16559 108 aa4.48□□□□□ -1.69
SMARCE1-217ENST00000580654 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
SMARCE1-217ENST00000580654 SDHCQ99643 169 aaPredicted RBP4.48□□□□□ -1.69
SMARCE1-217ENST00000580654 ZNF471Q9BX82 626 aaPredicted RBP4.48□□□□□ -1.69
SMARCE1-217ENST00000580654 RPP21Q9H633 154 aaKnown RBP4.48□□□□□ -1.69
SMARCE1-217ENST00000580654 EPDR1Q9UM22 224 aa4.48□□□□□ -1.69
SMARCE1-217ENST00000580654 PKIGQ9Y2B9 76 aa4.48□□□□□ -1.69
SMARCE1-217ENST00000580654 CARHSP1Q9Y2V2 147 aaKnown RBP4.48□□□□□ -1.69
SMARCE1-217ENST00000580654 K7EN84 100 aa4.47□□□□□ -1.69
SMARCE1-217ENST00000580654 SH2D1AO60880 128 aa4.47□□□□□ -1.69
SMARCE1-217ENST00000580654 IL7P13232 177 aa4.47□□□□□ -1.69
SMARCE1-217ENST00000580654 SYCNQ0VAF6 134 aa4.47□□□□□ -1.69
SMARCE1-217ENST00000580654 SCGB1C1Q8TD33 95 aa4.47□□□□□ -1.69
SMARCE1-217ENST00000580654 TMEM243Q9BU79 118 aa4.47□□□□□ -1.69
SMARCE1-217ENST00000580654 PAM16Q9Y3D7 125 aa4.47□□□□□ -1.69
SMARCE1-217ENST00000580654 LOC107984640A0A0U1RRK4 108 aa4.46□□□□□ -1.7
SMARCE1-217ENST00000580654 H0YIZ8 118 aa4.46□□□□□ -1.7
SMARCE1-217ENST00000580654 LYRM1O43325 122 aa4.46□□□□□ -1.7
SMARCE1-217ENST00000580654 ARL14EPLP0DKL9 152 aa4.46□□□□□ -1.7
SMARCE1-217ENST00000580654 BCL2P10415 239 aa4.46□□□□□ -1.7
SMARCE1-217ENST00000580654 CRYGAP11844 174 aa4.46□□□□□ -1.7
SMARCE1-217ENST00000580654 RPL12P30050 165 aaKnown RBP4.46□□□□□ -1.7
SMARCE1-217ENST00000580654 EIF5AP63241 154 aaKnown RBP4.46□□□□□ -1.7
SMARCE1-217ENST00000580654 LRRC37A5PQ49AS3 106 aa4.46□□□□□ -1.7
SMARCE1-217ENST00000580654 Q86TA4 180 aa4.46□□□□□ -1.7
SMARCE1-217ENST00000580654 OR10AG1Q8NH19 301 aa4.46□□□□□ -1.7
SMARCE1-217ENST00000580654 RBM38Q9H0Z9 239 aaKnown RBP4.46□□□□□ -1.7
SMARCE1-217ENST00000580654 A0A087WZ39 114 aa4.45□□□□□ -1.7
SMARCE1-217ENST00000580654 A0A087X002 238 aa4.45□□□□□ -1.7
SMARCE1-217ENST00000580654 C9orf118A6NHY6 69 aa4.45□□□□□ -1.7
SMARCE1-217ENST00000580654 PLA2G10O15496 165 aa4.45□□□□□ -1.7
SMARCE1-217ENST00000580654 SIX6O95475 246 aa4.45□□□□□ -1.7
SMARCE1-217ENST00000580654 PPBPP02775 128 aa4.45□□□□□ -1.7
SMARCE1-217ENST00000580654 SCGB1A1P11684 91 aa4.45□□□□□ -1.7
SMARCE1-217ENST00000580654 SEC61BP60468 96 aaKnown RBP4.45□□□□□ -1.7
SMARCE1-217ENST00000580654 MLST8Q9BVC4 326 aa4.45□□□□□ -1.7
SMARCE1-217ENST00000580654 IGLV7-46A0A075B6I9 117 aa4.44□□□□□ -1.7
SMARCE1-217ENST00000580654 IGHV1-58A0A0C4DH39 117 aa4.44□□□□□ -1.7
SMARCE1-217ENST00000580654 MUC21A0A140T8X8 626 aa4.44□□□□□ -1.7
SMARCE1-217ENST00000580654 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.44□□□□□ -1.7
SMARCE1-217ENST00000580654 M0QY20 66 aa4.44□□□□□ -1.7
SMARCE1-217ENST00000580654 DEFA3P59666 94 aa4.44□□□□□ -1.7
SMARCE1-217ENST00000580654 MT1HP80294 61 aa4.44□□□□□ -1.7
SMARCE1-217ENST00000580654 MEF2BQ02080 365 aaPredicted RBP4.44□□□□□ -1.7
SMARCE1-217ENST00000580654 KRTAP19-2Q3LHN2 52 aa4.44□□□□□ -1.7
SMARCE1-217ENST00000580654 NUP35Q8NFH5 326 aa4.44□□□□□ -1.7
SMARCE1-217ENST00000580654 SMIM3Q9BZL3 60 aa4.44□□□□□ -1.7
SMARCE1-217ENST00000580654 FAM168BA1KXE4 195 aa4.43□□□□□ -1.7
SMARCE1-217ENST00000580654 TSTD3H0UI37 97 aa4.43□□□□□ -1.7
SMARCE1-217ENST00000580654 CFC1BP0CG36 223 aa4.43□□□□□ -1.7
SMARCE1-217ENST00000580654 FGF6P10767 208 aa4.43□□□□□ -1.7
SMARCE1-217ENST00000580654 GCHFRP30047 84 aa4.43□□□□□ -1.7
SMARCE1-217ENST00000580654 ASB16-AS1Q495Z4 193 aa4.43□□□□□ -1.7
SMARCE1-217ENST00000580654 FAM162BQ5T6X4 162 aa4.43□□□□□ -1.7
SMARCE1-217ENST00000580654 KRTAP7-1Q8IUC3 87 aa4.43□□□□□ -1.7
SMARCE1-217ENST00000580654 PGLYRP4Q96LB8 373 aa4.43□□□□□ -1.7
SMARCE1-217ENST00000580654 IGLV4-69A0A075B6H9 119 aa4.42□□□□□ -1.7
SMARCE1-217ENST00000580654 UBE2L6O14933 153 aa4.42□□□□□ -1.7
SMARCE1-217ENST00000580654 APOMO95445 188 aa4.42□□□□□ -1.7
SMARCE1-217ENST00000580654 XCL1P47992 114 aa4.42□□□□□ -1.7
SMARCE1-217ENST00000580654 SUMO4Q6EEV6 95 aa4.42□□□□□ -1.7
SMARCE1-217ENST00000580654 MED28Q9H204 178 aa4.42□□□□□ -1.7
SMARCE1-217ENST00000580654 HSPB11Q9Y547 144 aa4.42□□□□□ -1.7
SMARCE1-217ENST00000580654 CCL25O15444 150 aa4.41□□□□□ -1.7
SMARCE1-217ENST00000580654 KRTAP10-6P60371 365 aaPredicted RBP4.41□□□□□ -1.7
SMARCE1-217ENST00000580654 BLOC1S1P78537 153 aa4.41□□□□□ -1.7
SMARCE1-217ENST00000580654 RPL18AQ02543 176 aaKnown RBP4.41□□□□□ -1.7
SMARCE1-217ENST00000580654 WFDC1Q9HC57 220 aa4.41□□□□□ -1.7
SMARCE1-217ENST00000580654 SSPOA2VEC9 5147 aa4.4□□□□□ -1.7
SMARCE1-217ENST00000580654 LINC00959A0A1B0GUT2 108 aa4.4□□□□□ -1.71
SMARCE1-217ENST00000580654 F8W036 122 aa4.4□□□□□ -1.71
SMARCE1-217ENST00000580654 PEX7O00628 323 aa4.4□□□□□ -1.71
SMARCE1-217ENST00000580654 LINC01561Q8N1V8 128 aa4.4□□□□□ -1.71
SMARCE1-217ENST00000580654 OR5A1Q8NGJ0 315 aa4.4□□□□□ -1.71
SMARCE1-217ENST00000580654 TYMSOSQ8TAI1 123 aa4.4□□□□□ -1.71
SMARCE1-217ENST00000580654 PPP1R1CQ8WVI7 109 aa4.4□□□□□ -1.71
SMARCE1-217ENST00000580654 OPRPNQ99935 248 aaPredicted RBP4.4□□□□□ -1.71
SMARCE1-217ENST00000580654 PPDPFQ9H3Y8 114 aa4.4□□□□□ -1.71
SMARCE1-217ENST00000580654 A0A1W2PRE2 83 aa4.39□□□□□ -1.71
SMARCE1-217ENST00000580654 TCAPO15273 167 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms