RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 HIGD2BQ4VC39 106 aa8.74□□□□□ -1.01
GGA3-208ENST00000579743 C15orf56Q8N910 161 aa8.74□□□□□ -1.01
GGA3-208ENST00000579743 TSKUQ8WUA8 353 aa8.74□□□□□ -1.01
GGA3-208ENST00000579743 GVQW2A0A096LPI5 108 aaPredicted RBP8.73□□□□□ -1.01
GGA3-208ENST00000579743 ZNF727A8MUV8 499 aa8.73□□□□□ -1.01
GGA3-208ENST00000579743 APOC3P02656 99 aa8.73□□□□□ -1.01
GGA3-208ENST00000579743 SLPIP03973 132 aa8.73□□□□□ -1.01
GGA3-208ENST00000579743 PEA15Q15121 130 aa8.73□□□□□ -1.01
GGA3-208ENST00000579743 MAJINQ3KP22 176 aa8.73□□□□□ -1.01
GGA3-208ENST00000579743 TMEM191AQ9H0A3 160 aa8.73□□□□□ -1.01
GGA3-208ENST00000579743 SMDT1Q9H4I9 107 aa8.73□□□□□ -1.01
GGA3-208ENST00000579743 PLAC8Q9NZF1 115 aa8.73□□□□□ -1.01
GGA3-208ENST00000579743 IGHV1-58A0A0C4DH39 117 aa8.72□□□□□ -1.01
GGA3-208ENST00000579743 HIGD1CA8MV81 97 aa8.72□□□□□ -1.01
GGA3-208ENST00000579743 F8W036 122 aa8.72□□□□□ -1.01
GGA3-208ENST00000579743 CHTF8P0CG12 524 aa8.72□□□□□ -1.01
GGA3-208ENST00000579743 FCER1GP30273 86 aa8.72□□□□□ -1.01
GGA3-208ENST00000579743 XCL1P47992 114 aa8.72□□□□□ -1.01
GGA3-208ENST00000579743 RIGQ13278 110 aa8.72□□□□□ -1.01
GGA3-208ENST00000579743 SVBPQ8N300 66 aa8.72□□□□□ -1.01
GGA3-208ENST00000579743 OSTCQ9NRP0 149 aa8.72□□□□□ -1.01
GGA3-208ENST00000579743 DNAH8Q96JB1 4490 aa8.72□□□□□ -1.01
GGA3-208ENST00000579743 IGKV2-24A0A0C4DH68 120 aa8.71□□□□□ -1.02
GGA3-208ENST00000579743 LINC00959A0A1B0GUT2 108 aa8.71□□□□□ -1.02
GGA3-208ENST00000579743 ZNF561-AS1K7EIQ3 104 aa8.71□□□□□ -1.02
GGA3-208ENST00000579743 CCL25O15444 150 aa8.71□□□□□ -1.02
GGA3-208ENST00000579743 LINC01551Q86U37 167 aa8.71□□□□□ -1.02
GGA3-208ENST00000579743 C7orf77A4D0Y5 90 aa8.7□□□□□ -1.02
GGA3-208ENST00000579743 VCYO14598 125 aa8.7□□□□□ -1.02
GGA3-208ENST00000579743 HNRNPA3P51991 378 aaKnown RBP8.7□□□□□ -1.02
GGA3-208ENST00000579743 FOXI1Q12951 378 aa8.7□□□□□ -1.02
GGA3-208ENST00000579743 STPG4Q8N801 248 aa8.7□□□□□ -1.02
GGA3-208ENST00000579743 ISOC2Q96AB3 205 aa8.7□□□□□ -1.02
GGA3-208ENST00000579743 TMEM18Q96B42 140 aa8.7□□□□□ -1.02
GGA3-208ENST00000579743 KIR2DL4Q99706 377 aa8.7□□□□□ -1.02
GGA3-208ENST00000579743 TMEM242Q9NWH2 141 aa8.7□□□□□ -1.02
GGA3-208ENST00000579743 TRBV27A0A0K0K1C4 114 aa8.69□□□□□ -1.02
GGA3-208ENST00000579743 TSHBP01222 138 aa8.69□□□□□ -1.02
GGA3-208ENST00000579743 SRP19P09132 144 aaKnown RBP8.69□□□□□ -1.02
GGA3-208ENST00000579743 ESDP10768 282 aa8.69□□□□□ -1.02
GGA3-208ENST00000579743 RAB4AP20338 218 aa8.69□□□□□ -1.02
GGA3-208ENST00000579743 MALP21145 153 aa8.69□□□□□ -1.02
GGA3-208ENST00000579743 CD164L2Q6UWJ8 174 aa8.69□□□□□ -1.02
GGA3-208ENST00000579743 MRPL52Q86TS9 123 aaKnown RBP8.69□□□□□ -1.02
GGA3-208ENST00000579743 ZNF664Q8N3J9 261 aa8.69□□□□□ -1.02
GGA3-208ENST00000579743 PRSS3P2Q8NHM4 247 aa8.69□□□□□ -1.02
GGA3-208ENST00000579743 C1orf196B1AJZ1 125 aa8.68□□□□□ -1.02
GGA3-208ENST00000579743 PHOX2AO14813 284 aa8.68□□□□□ -1.02
GGA3-208ENST00000579743 PPP1R2P9O14990 202 aa8.68□□□□□ -1.02
GGA3-208ENST00000579743 SNAPINO95295 136 aa8.68□□□□□ -1.02
GGA3-208ENST00000579743 POLR2KP53803 58 aaKnown RBP8.68□□□□□ -1.02
GGA3-208ENST00000579743 FAM74A3Q4VXF1 159 aa8.68□□□□□ -1.02
GGA3-208ENST00000579743 CARD19Q96LW7 228 aa8.68□□□□□ -1.02
GGA3-208ENST00000579743 CDC42SE2Q9NRR3 84 aa8.68□□□□□ -1.02
GGA3-208ENST00000579743 NAT8BQ9UHF3 227 aa8.68□□□□□ -1.02
GGA3-208ENST00000579743 TCAPO15273 167 aa8.67□□□□□ -1.02
GGA3-208ENST00000579743 TMEM241Q24JQ0 296 aa8.67□□□□□ -1.02
GGA3-208ENST00000579743 AMN1Q8IY45 258 aa8.67□□□□□ -1.02
GGA3-208ENST00000579743 SUMO2P61956 95 aaKnown RBP8.66□□□□□ -1.02
GGA3-208ENST00000579743 SYCNQ0VAF6 134 aa8.66□□□□□ -1.02
GGA3-208ENST00000579743 A0A1B0GW15 77 aa8.65□□□□□ -1.02
GGA3-208ENST00000579743 COX7A2LO14548 114 aa8.65□□□□□ -1.02
GGA3-208ENST00000579743 APOMO95445 188 aa8.65□□□□□ -1.02
GGA3-208ENST00000579743 CSDC2Q9Y534 153 aaKnown RBP8.65□□□□□ -1.02
GGA3-208ENST00000579743 A0A096LNI7 61 aa8.64□□□□□ -1.03
GGA3-208ENST00000579743 S100A8P05109 93 aa8.64□□□□□ -1.03
GGA3-208ENST00000579743 CAMPP49913 170 aa8.64□□□□□ -1.03
GGA3-208ENST00000579743 NUP35Q8NFH5 326 aa8.64□□□□□ -1.03
GGA3-208ENST00000579743 V9GYV3 84 aa8.64□□□□□ -1.03
GGA3-208ENST00000579743 LOC107984640A0A0U1RRK4 108 aa8.63□□□□□ -1.03
GGA3-208ENST00000579743 GAS8-AS1O95177 125 aa8.63□□□□□ -1.03
GGA3-208ENST00000579743 PRR3P79522 188 aaKnown RBP8.63□□□□□ -1.03
GGA3-208ENST00000579743 RHEBQ15382 184 aa8.63□□□□□ -1.03
GGA3-208ENST00000579743 ADIRFQ15847 76 aa8.63□□□□□ -1.03
GGA3-208ENST00000579743 REG3GQ6UW15 175 aa8.63□□□□□ -1.03
GGA3-208ENST00000579743 C20orf78Q9BR46 151 aa8.63□□□□□ -1.03
GGA3-208ENST00000579743 NAT8Q9UHE5 227 aa8.63□□□□□ -1.03
GGA3-208ENST00000579743 SMKR1H3BMG3 65 aa8.62□□□□□ -1.03
GGA3-208ENST00000579743 CKS2P33552 79 aa8.62□□□□□ -1.03
GGA3-208ENST00000579743 FAM104BQ5XKR9 115 aa8.62□□□□□ -1.03
GGA3-208ENST00000579743 CBLN2Q8IUK8 224 aa8.62□□□□□ -1.03
GGA3-208ENST00000579743 IGLV4-69A0A075B6H9 119 aa8.61□□□□□ -1.03
GGA3-208ENST00000579743 TRAV13-1A0A0B4J241 112 aa8.61□□□□□ -1.03
GGA3-208ENST00000579743 Q6ZRP5 223 aa8.61□□□□□ -1.03
GGA3-208ENST00000579743 LINC00526Q96FQ7 95 aa8.61□□□□□ -1.03
GGA3-208ENST00000579743 CAMK2N2Q96S95 79 aa8.61□□□□□ -1.03
GGA3-208ENST00000579743 TIMM21Q9BVV7 248 aa8.61□□□□□ -1.03
GGA3-208ENST00000579743 UBE2D4Q9Y2X8 147 aa8.61□□□□□ -1.03
GGA3-208ENST00000579743 MT1HL1P0DM35 61 aa8.6□□□□□ -1.03
GGA3-208ENST00000579743 RPL23P62829 140 aaKnown RBP8.6□□□□□ -1.03
GGA3-208ENST00000579743 PNRC1Q12796 327 aaPredicted RBP8.6□□□□□ -1.03
GGA3-208ENST00000579743 GAGE2BQ13066 116 aa8.6□□□□□ -1.03
GGA3-208ENST00000579743 SPINK6Q6UWN8 80 aa8.6□□□□□ -1.03
GGA3-208ENST00000579743 NRACQ8N912 160 aa8.6□□□□□ -1.03
GGA3-208ENST00000579743 C2orf48Q96LS8 159 aa8.6□□□□□ -1.03
GGA3-208ENST00000579743 SMIM27A0A1W2PRY6 76 aa8.59□□□□□ -1.03
GGA3-208ENST00000579743 PTTG1IPP53801 180 aa8.59□□□□□ -1.03
GGA3-208ENST00000579743 MRPL51Q4U2R6 128 aaKnown RBP8.59□□□□□ -1.03
GGA3-208ENST00000579743 TMA7Q9Y2S6 64 aaKnown RBP8.59□□□□□ -1.03
GGA3-208ENST00000579743 TRBV24-1A0A075B6N3 115 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms