RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 RHEBQ15382 184 aa8.68□□□□□ -1.02
CSNK1D-211ENST00000579316 SPINK6Q6UWN8 80 aa8.68□□□□□ -1.02
CSNK1D-211ENST00000579316 BTF3L4Q96K17 158 aa8.68□□□□□ -1.02
CSNK1D-211ENST00000579316 IGHV1-24A0A0C4DH33 117 aa8.67□□□□□ -1.02
CSNK1D-211ENST00000579316 A0A1B0GXF2 115 aa8.67□□□□□ -1.02
CSNK1D-211ENST00000579316 CRPP02741 224 aa8.67□□□□□ -1.02
CSNK1D-211ENST00000579316 FAM104BQ5XKR9 115 aa8.67□□□□□ -1.02
CSNK1D-211ENST00000579316 CLRN3Q8NCR9 226 aa8.67□□□□□ -1.02
CSNK1D-211ENST00000579316 RPL39LQ96EH5 51 aaKnown RBP8.67□□□□□ -1.02
CSNK1D-211ENST00000579316 CHCHD5Q9BSY4 110 aa8.67□□□□□ -1.02
CSNK1D-211ENST00000579316 ST20Q9HBF5 79 aa8.67□□□□□ -1.02
CSNK1D-211ENST00000579316 IGHV3-64A0A075B6Q5 118 aa8.66□□□□□ -1.02
CSNK1D-211ENST00000579316 TRAV9-1A0A075B6T8 112 aa8.66□□□□□ -1.02
CSNK1D-211ENST00000579316 TRBV6-5A0A0K0K1A5 114 aa8.66□□□□□ -1.02
CSNK1D-211ENST00000579316 CHTF8P0CG12 524 aa8.66□□□□□ -1.02
CSNK1D-211ENST00000579316 COTL1Q14019 142 aa8.66□□□□□ -1.02
CSNK1D-211ENST00000579316 MIAQ16674 131 aa8.66□□□□□ -1.02
CSNK1D-211ENST00000579316 SVBPQ8N300 66 aa8.66□□□□□ -1.02
CSNK1D-211ENST00000579316 DPH3Q96FX2 82 aa8.66□□□□□ -1.02
CSNK1D-211ENST00000579316 TMEM242Q9NWH2 141 aa8.66□□□□□ -1.02
CSNK1D-211ENST00000579316 C7orf77A4D0Y5 90 aa8.65□□□□□ -1.02
CSNK1D-211ENST00000579316 SDHAF1A6NFY7 115 aa8.65□□□□□ -1.02
CSNK1D-211ENST00000579316 TMEM262E9PQX1 116 aa8.65□□□□□ -1.02
CSNK1D-211ENST00000579316 SNAPINO95295 136 aa8.65□□□□□ -1.02
CSNK1D-211ENST00000579316 APOC3P02656 99 aa8.65□□□□□ -1.02
CSNK1D-211ENST00000579316 CKS2P33552 79 aa8.65□□□□□ -1.02
CSNK1D-211ENST00000579316 IQCJQ1A5X6 159 aa8.65□□□□□ -1.02
CSNK1D-211ENST00000579316 MRPL51Q4U2R6 128 aaKnown RBP8.65□□□□□ -1.02
CSNK1D-211ENST00000579316 KRTAP26-1Q6PEX3 210 aa8.65□□□□□ -1.02
CSNK1D-211ENST00000579316 RPS10P5Q9NQ39 176 aa8.65□□□□□ -1.02
CSNK1D-211ENST00000579316 I3L3M4 83 aa8.64□□□□□ -1.03
CSNK1D-211ENST00000579316 NCR2O95944 276 aa8.64□□□□□ -1.03
CSNK1D-211ENST00000579316 PPBPP02775 128 aa8.64□□□□□ -1.03
CSNK1D-211ENST00000579316 PMCHP20382 165 aa8.64□□□□□ -1.03
CSNK1D-211ENST00000579316 AMTP48728 403 aa8.64□□□□□ -1.03
CSNK1D-211ENST00000579316 TMEM243Q9BU79 118 aa8.64□□□□□ -1.03
CSNK1D-211ENST00000579316 UBE2L6O14933 153 aa8.63□□□□□ -1.03
CSNK1D-211ENST00000579316 NTM-AS1Q6ZSK4 140 aa8.63□□□□□ -1.03
CSNK1D-211ENST00000579316 FSIP2Q5CZC0 6907 aa8.63□□□□□ -1.03
CSNK1D-211ENST00000579316 SMKR1H3BMG3 65 aa8.62□□□□□ -1.03
CSNK1D-211ENST00000579316 APCSP02743 223 aa8.62□□□□□ -1.03
CSNK1D-211ENST00000579316 RPS10P46783 165 aaKnown RBP8.62□□□□□ -1.03
CSNK1D-211ENST00000579316 SUMO2P61956 95 aaKnown RBP8.62□□□□□ -1.03
CSNK1D-211ENST00000579316 SRSF9Q13242 221 aaKnown RBP eCLIP8.62□□□□□ -1.034e-6■■□□□ 11.4
CSNK1D-211ENST00000579316 MPV17L2Q567V2 206 aa8.62□□□□□ -1.03
CSNK1D-211ENST00000579316 ORMDL3Q8N138 153 aa8.62□□□□□ -1.03
CSNK1D-211ENST00000579316 PRR34Q9NV39 138 aa8.62□□□□□ -1.03
CSNK1D-211ENST00000579316 TRBV27A0A0K0K1C4 114 aa8.61□□□□□ -1.03
CSNK1D-211ENST00000579316 D6R8Y8 96 aa8.61□□□□□ -1.03
CSNK1D-211ENST00000579316 VCYO14598 125 aa8.61□□□□□ -1.03
CSNK1D-211ENST00000579316 ANGP03950 147 aaKnown RBP8.61□□□□□ -1.03
CSNK1D-211ENST00000579316 GAGE6Q13070 117 aa8.61□□□□□ -1.03
CSNK1D-211ENST00000579316 COX19Q49B96 90 aa8.61□□□□□ -1.03
CSNK1D-211ENST00000579316 NRACQ8N912 160 aa8.61□□□□□ -1.03
CSNK1D-211ENST00000579316 C20orf78Q9BR46 151 aa8.61□□□□□ -1.03
CSNK1D-211ENST00000579316 TRBV24-1A0A075B6N3 115 aa8.6□□□□□ -1.03
CSNK1D-211ENST00000579316 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.6□□□□□ -1.03
CSNK1D-211ENST00000579316 TNFRSF6BO95407 300 aa8.6□□□□□ -1.03
CSNK1D-211ENST00000579316 SLPIP03973 132 aa8.6□□□□□ -1.03
CSNK1D-211ENST00000579316 FCER1GP30273 86 aa8.6□□□□□ -1.03
CSNK1D-211ENST00000579316 POLR2KP53803 58 aaKnown RBP8.6□□□□□ -1.03
CSNK1D-211ENST00000579316 TMEM136Q6ZRR5 245 aa8.6□□□□□ -1.03
CSNK1D-211ENST00000579316 KIR2DL4Q99706 377 aa8.6□□□□□ -1.03
CSNK1D-211ENST00000579316 LAMTOR2Q9Y2Q5 125 aa8.6□□□□□ -1.03
CSNK1D-211ENST00000579316 hDV102S1A0JD36 115 aa8.59□□□□□ -1.03
CSNK1D-211ENST00000579316 H7C423 109 aa8.59□□□□□ -1.03
CSNK1D-211ENST00000579316 TCAPO15273 167 aa8.59□□□□□ -1.03
CSNK1D-211ENST00000579316 PRELID3AQ96N28 172 aa8.59□□□□□ -1.03
CSNK1D-211ENST00000579316 RBX1P62877 108 aa8.58□□□□□ -1.04
CSNK1D-211ENST00000579316 RPL32P62910 135 aaKnown RBP8.58□□□□□ -1.04
CSNK1D-211ENST00000579316 AMMECR1LQ6DCA0 310 aa8.58□□□□□ -1.04
CSNK1D-211ENST00000579316 SLC7A5P1Q8MH63 180 aa8.58□□□□□ -1.04
CSNK1D-211ENST00000579316 A0A1B0GUV1 79 aa8.57□□□□□ -1.04
CSNK1D-211ENST00000579316 TSHBP01222 138 aa8.57□□□□□ -1.04
CSNK1D-211ENST00000579316 NPYP01303 97 aa8.57□□□□□ -1.04
CSNK1D-211ENST00000579316 MT-ND6P03923 174 aa8.57□□□□□ -1.04
CSNK1D-211ENST00000579316 SMAGPQ0VAQ4 97 aa8.57□□□□□ -1.04
CSNK1D-211ENST00000579316 SMIM2Q9BVW6 85 aa8.57□□□□□ -1.04
CSNK1D-211ENST00000579316 GNB1LQ9BYB4 327 aa8.57□□□□□ -1.04
CSNK1D-211ENST00000579316 AP5S1Q9NUS5 200 aa8.57□□□□□ -1.04
CSNK1D-211ENST00000579316 ZNF25P17030 456 aaPredicted RBP8.56□□□□□ -1.04
CSNK1D-211ENST00000579316 MAP1LC3AQ9H492 121 aa8.56□□□□□ -1.04
CSNK1D-211ENST00000579316 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.55□□□□□ -1.04
CSNK1D-211ENST00000579316 IGKV2-29A2NJV5 120 aaPredicted RBP8.55□□□□□ -1.04
CSNK1D-211ENST00000579316 RNASEKQ6P5S7 137 aaKnown RBP8.55□□□□□ -1.04
CSNK1D-211ENST00000579316 TMEM18Q96B42 140 aa8.55□□□□□ -1.04
CSNK1D-211ENST00000579316 TMEM101Q96IK0 257 aa8.55□□□□□ -1.04
CSNK1D-211ENST00000579316 FGF6P10767 208 aa8.54□□□□□ -1.04
CSNK1D-211ENST00000579316 ESDP10768 282 aa8.54□□□□□ -1.04
CSNK1D-211ENST00000579316 RAB5AP20339 215 aa8.54□□□□□ -1.04
CSNK1D-211ENST00000579316 COX6A2Q02221 97 aa8.54□□□□□ -1.04
CSNK1D-211ENST00000579316 MAJINQ3KP22 176 aa8.54□□□□□ -1.04
CSNK1D-211ENST00000579316 LINC00269Q8N2A0 174 aa8.54□□□□□ -1.04
CSNK1D-211ENST00000579316 REG3AQ06141 175 aa8.53□□□□□ -1.04
CSNK1D-211ENST00000579316 CLPSL2Q6UWE3 100 aa8.53□□□□□ -1.04
CSNK1D-211ENST00000579316 STPG4Q8N801 248 aa8.53□□□□□ -1.04
CSNK1D-211ENST00000579316 IGLV4-60A0A075B6I1 120 aa8.52□□□□□ -1.05
CSNK1D-211ENST00000579316 IGLV10-54A0A075B6I4 117 aa8.52□□□□□ -1.05
CSNK1D-211ENST00000579316 TGIF2-C20orf24A0A0A6YYL0 155 aa8.52□□□□□ -1.05
CSNK1D-211ENST00000579316 PRSS47A8MTI9 375 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms