RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 TRAV9-1A0A075B6T8 112 aa15.12■□□□□ 0.01
LIMD2-204ENST00000578297 IGKV3OR2-268A0A0C4DH90 116 aa15.12■□□□□ 0.01
LIMD2-204ENST00000578297 CDC42SE2Q9NRR3 84 aa15.11■□□□□ 0.01
LIMD2-204ENST00000578297 LAMTOR2Q9Y2Q5 125 aa15.11■□□□□ 0.01
LIMD2-204ENST00000578297 SMAGPQ0VAQ4 97 aa15.1■□□□□ 0.01
LIMD2-204ENST00000578297 CSDC2Q9Y534 153 aaKnown RBP15.1■□□□□ 0.01
LIMD2-204ENST00000578297 XGP55808 180 aa15.09■□□□□ 0.01
LIMD2-204ENST00000578297 TMEM18Q96B42 140 aa15.09■□□□□ 0.01
LIMD2-204ENST00000578297 UBE2D4Q9Y2X8 147 aa15.09■□□□□ 0.01
LIMD2-204ENST00000578297 PRSS47A8MTI9 375 aa15.08■□□□□ 0
LIMD2-204ENST00000578297 PRSS1P07477 247 aa15.08■□□□□ 0
LIMD2-204ENST00000578297 S100PP25815 95 aa15.08■□□□□ 0
LIMD2-204ENST00000578297 RHEBQ15382 184 aa15.08■□□□□ 0
LIMD2-204ENST00000578297 DGAT2L7PQ6IED9 249 aa15.08■□□□□ 0
LIMD2-204ENST00000578297 ZNF664Q8N3J9 261 aa15.08■□□□□ 0
LIMD2-204ENST00000578297 CLRN3Q8NCR9 226 aa15.08■□□□□ 0
LIMD2-204ENST00000578297 GAGE12HA6NDE8 117 aa15.07■□□□□ 0
LIMD2-204ENST00000578297 CHCHD10Q8WYQ3 142 aaPredicted RBP15.07■□□□□ 0
LIMD2-204ENST00000578297 TIMM21Q9BVV7 248 aa15.07■□□□□ 0
LIMD2-204ENST00000578297 DNAH8Q96JB1 4490 aa15.06■□□□□ 0
LIMD2-204ENST00000578297 LINC00959A0A1B0GUT2 108 aa15.06■□□□□ 0
LIMD2-204ENST00000578297 KRTAP17-1Q9BYP8 105 aa15.06■□□□□ 0
LIMD2-204ENST00000578297 MAP1LC3AQ9H492 121 aa15.04■□□□□ -0
LIMD2-204ENST00000578297 RPS10P5Q9NQ39 176 aa15.04■□□□□ -0
LIMD2-204ENST00000578297 RAB5AP20339 215 aa15.03■□□□□ -0
LIMD2-204ENST00000578297 LINC01620Q4KN68 170 aa15.03■□□□□ -0
LIMD2-204ENST00000578297 Q8N1X5 172 aa15.03■□□□□ -0
LIMD2-204ENST00000578297 FAM30AQ9NZY2 134 aa15.03■□□□□ -0
LIMD2-204ENST00000578297 RPL39P62891 51 aaKnown RBP15.02■□□□□ -0
LIMD2-204ENST00000578297 SS18Q15532 418 aa15.02■□□□□ -0
LIMD2-204ENST00000578297 Q6ZSA8 131 aa15.02■□□□□ -0
LIMD2-204ENST00000578297 LOC389332A0A1B0GUA5 103 aa15.01□□□□□ -0.01
LIMD2-204ENST00000578297 FOXI1Q12951 378 aa15.01□□□□□ -0.01
LIMD2-204ENST00000578297 CFAP161Q6P656 301 aa15.01□□□□□ -0.01
LIMD2-204ENST00000578297 hDV102S1A0JD36 115 aa15□□□□□ -0.01
LIMD2-204ENST00000578297 CCL25O15444 150 aa15□□□□□ -0.01
LIMD2-204ENST00000578297 APOC3P02656 99 aa15□□□□□ -0.01
LIMD2-204ENST00000578297 XCL1P47992 114 aa15□□□□□ -0.01
LIMD2-204ENST00000578297 Q8N8P6 123 aa15□□□□□ -0.01
LIMD2-204ENST00000578297 GNB1LQ9BYB4 327 aa15□□□□□ -0.01
LIMD2-204ENST00000578297 SPANXA1Q9NS26 97 aa15□□□□□ -0.01
LIMD2-204ENST00000578297 NDUFA5Q16718 116 aa14.99□□□□□ -0.01
LIMD2-204ENST00000578297 COX19Q49B96 90 aa14.99□□□□□ -0.01
LIMD2-204ENST00000578297 Q6ZUT4 128 aa14.99□□□□□ -0.01
LIMD2-204ENST00000578297 C15orf56Q8N910 161 aa14.99□□□□□ -0.01
LIMD2-204ENST00000578297 CNBPP62633 177 aaKnown RBP14.98□□□□□ -0.01
LIMD2-204ENST00000578297 RNASE13Q5GAN3 156 aaKnown RBP14.98□□□□□ -0.01
LIMD2-204ENST00000578297 SVBPQ8N300 66 aa14.98□□□□□ -0.01
LIMD2-204ENST00000578297 C9orf163Q8N9P6 203 aa14.98□□□□□ -0.01
LIMD2-204ENST00000578297 KRTAP4-5Q9BYR2 181 aa14.98□□□□□ -0.01
LIMD2-204ENST00000578297 C1orf196B1AJZ1 125 aa14.97□□□□□ -0.01
LIMD2-204ENST00000578297 SNAPINO95295 136 aa14.97□□□□□ -0.01
LIMD2-204ENST00000578297 KIAA1644Q3SXP7 199 aa14.97□□□□□ -0.01
LIMD2-204ENST00000578297 CD164L2Q6UWJ8 174 aa14.97□□□□□ -0.01
LIMD2-204ENST00000578297 K7EMI3 77 aa14.96□□□□□ -0.01
LIMD2-204ENST00000578297 HAMPP81172 84 aa14.96□□□□□ -0.01
LIMD2-204ENST00000578297 MRPS36P82909 103 aaKnown RBP14.96□□□□□ -0.01
LIMD2-204ENST00000578297 FAM104AQ969W3 186 aa14.96□□□□□ -0.01
LIMD2-204ENST00000578297 AP5S1Q9NUS5 200 aa14.96□□□□□ -0.01
LIMD2-204ENST00000578297 NXT2Q9NPJ8 142 aaKnown RBP14.95□□□□□ -0.02
LIMD2-204ENST00000578297 MT-ND6P03923 174 aa14.94□□□□□ -0.02
LIMD2-204ENST00000578297 PYGO1Q9Y3Y4 419 aa14.94□□□□□ -0.02
LIMD2-204ENST00000578297 TRAV13-1A0A0B4J241 112 aa14.93□□□□□ -0.02
LIMD2-204ENST00000578297 SLPIP03973 132 aa14.93□□□□□ -0.02
LIMD2-204ENST00000578297 ORMDL2Q53FV1 153 aa14.93□□□□□ -0.02
LIMD2-204ENST00000578297 OPRPNQ99935 248 aaPredicted RBP14.93□□□□□ -0.02
LIMD2-204ENST00000578297 GVQW2A0A096LPI5 108 aaPredicted RBP14.92□□□□□ -0.02
LIMD2-204ENST00000578297 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.92□□□□□ -0.02
LIMD2-204ENST00000578297 IFI27P40305 119 aaPredicted RBP14.92□□□□□ -0.02
LIMD2-204ENST00000578297 IGHV1-58A0A0C4DH39 117 aa14.91□□□□□ -0.02
LIMD2-204ENST00000578297 HIGD2BQ4VC39 106 aa14.91□□□□□ -0.02
LIMD2-204ENST00000578297 PCLOQ9Y6V0 5065 aa14.91□□□□□ -0.02
LIMD2-204ENST00000578297 SMR3BP02814 79 aaPredicted RBP14.9□□□□□ -0.02
LIMD2-204ENST00000578297 C2orf66Q6UXQ4 117 aa14.9□□□□□ -0.02
LIMD2-204ENST00000578297 ALKBH7Q9BT30 221 aaPredicted RBP14.9□□□□□ -0.02
LIMD2-204ENST00000578297 MRPL18Q9H0U6 180 aaKnown RBP14.9□□□□□ -0.02
LIMD2-204ENST00000578297 CYSLTR1Q9Y271 337 aa14.9□□□□□ -0.02
LIMD2-204ENST00000578297 FAT1Q14517 4588 aa14.9□□□□□ -0.02
LIMD2-204ENST00000578297 EPM2AB3EWF7 344 aa14.89□□□□□ -0.03
LIMD2-204ENST00000578297 SDIM1Q6ZPB5 146 aa14.89□□□□□ -0.03
LIMD2-204ENST00000578297 CHAC1Q9BUX1 264 aa14.89□□□□□ -0.03
LIMD2-204ENST00000578297 IGLV4-3A0A075B6K6 122 aa14.88□□□□□ -0.03
LIMD2-204ENST00000578297 TGIF2-C20orf24A0A0A6YYL0 155 aa14.88□□□□□ -0.03
LIMD2-204ENST00000578297 FABP9Q0Z7S8 132 aa14.88□□□□□ -0.03
LIMD2-204ENST00000578297 COX7A2LO14548 114 aa14.87□□□□□ -0.03
LIMD2-204ENST00000578297 G0S2P27469 103 aa14.87□□□□□ -0.03
LIMD2-204ENST00000578297 SCXQ7RTU7 201 aa14.87□□□□□ -0.03
LIMD2-204ENST00000578297 IGHV3-64A0A075B6Q5 118 aa14.86□□□□□ -0.03
LIMD2-204ENST00000578297 IFITM10A6NMD0 228 aa14.86□□□□□ -0.03
LIMD2-204ENST00000578297 PRSS3P2Q8NHM4 247 aa14.86□□□□□ -0.03
LIMD2-204ENST00000578297 TMEM141Q96I45 108 aa14.86□□□□□ -0.03
LIMD2-204ENST00000578297 ABCA13Q86UQ4 5058 aa14.85□□□□□ -0.03
LIMD2-204ENST00000578297 NPSP0C0P6 89 aa14.85□□□□□ -0.03
LIMD2-204ENST00000578297 MALP21145 153 aa14.85□□□□□ -0.03
LIMD2-204ENST00000578297 Q5VSD8 79 aa14.85□□□□□ -0.03
LIMD2-204ENST00000578297 CIRBP-AS1Q8TBR5 109 aa14.84□□□□□ -0.03
LIMD2-204ENST00000578297 LINC01546A6NGU7 62 aa14.83□□□□□ -0.04
LIMD2-204ENST00000578297 IGIPA6NJ69 53 aa14.83□□□□□ -0.04
LIMD2-204ENST00000578297 FAM229AH3BQW9 127 aa14.83□□□□□ -0.04
LIMD2-204ENST00000578297 C5orf38Q86SI9 138 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms