RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 MRPL52Q86TS9 123 aaKnown RBP14.56□□□□□ -0.08
SMARCD2-206ENST00000577990 OR5A1Q8NGJ0 315 aa14.56□□□□□ -0.08
SMARCD2-206ENST00000577990 PRELID3AQ96N28 172 aa14.56□□□□□ -0.08
SMARCD2-206ENST00000577990 IGKV3OR2-268A0A0C4DH90 116 aa14.55□□□□□ -0.08
SMARCD2-206ENST00000577990 USP17L23D6RBM5 183 aa14.55□□□□□ -0.08
SMARCD2-206ENST00000577990 TCAPO15273 167 aa14.55□□□□□ -0.08
SMARCD2-206ENST00000577990 TRAV9-1A0A075B6T8 112 aa14.54□□□□□ -0.08
SMARCD2-206ENST00000577990 Q8N1X5 172 aa14.54□□□□□ -0.08
SMARCD2-206ENST00000577990 RHEBQ15382 184 aa14.53□□□□□ -0.08
SMARCD2-206ENST00000577990 S100PP25815 95 aa14.52□□□□□ -0.09
SMARCD2-206ENST00000577990 SMAGPQ0VAQ4 97 aa14.52□□□□□ -0.09
SMARCD2-206ENST00000577990 CLRN3Q8NCR9 226 aa14.52□□□□□ -0.09
SMARCD2-206ENST00000577990 LAMTOR2Q9Y2Q5 125 aa14.52□□□□□ -0.09
SMARCD2-206ENST00000577990 TMEM18Q96B42 140 aa14.51□□□□□ -0.09
SMARCD2-206ENST00000577990 CDC42SE2Q9NRR3 84 aa14.51□□□□□ -0.09
SMARCD2-206ENST00000577990 FAT1Q14517 4588 aa14.5□□□□□ -0.09
SMARCD2-206ENST00000577990 DGAT2L7PQ6IED9 249 aa14.5□□□□□ -0.09
SMARCD2-206ENST00000577990 CHCHD10Q8WYQ3 142 aaPredicted RBP14.5□□□□□ -0.09
SMARCD2-206ENST00000577990 UBE2D4Q9Y2X8 147 aa14.5□□□□□ -0.09
SMARCD2-206ENST00000577990 GAGE12HA6NDE8 117 aa14.49□□□□□ -0.09
SMARCD2-206ENST00000577990 ZNF664Q8N3J9 261 aa14.49□□□□□ -0.09
SMARCD2-206ENST00000577990 RPS10P5Q9NQ39 176 aa14.49□□□□□ -0.09
SMARCD2-206ENST00000577990 CSDC2Q9Y534 153 aaKnown RBP14.49□□□□□ -0.09
SMARCD2-206ENST00000577990 PRSS1P07477 247 aa14.48□□□□□ -0.09
SMARCD2-206ENST00000577990 MAP1LC3AQ9H492 121 aa14.48□□□□□ -0.09
SMARCD2-206ENST00000577990 PRSS47A8MTI9 375 aa14.47□□□□□ -0.09
SMARCD2-206ENST00000577990 TIMM21Q9BVV7 248 aa14.47□□□□□ -0.09
SMARCD2-206ENST00000577990 LOC389332A0A1B0GUA5 103 aa14.46□□□□□ -0.09
SMARCD2-206ENST00000577990 LINC00959A0A1B0GUT2 108 aa14.46□□□□□ -0.09
SMARCD2-206ENST00000577990 APOC3P02656 99 aa14.46□□□□□ -0.09
SMARCD2-206ENST00000577990 RAB5AP20339 215 aa14.46□□□□□ -0.09
SMARCD2-206ENST00000577990 XGP55808 180 aa14.46□□□□□ -0.09
SMARCD2-206ENST00000577990 NDUFA5Q16718 116 aa14.46□□□□□ -0.09
SMARCD2-206ENST00000577990 RPL39P62891 51 aaKnown RBP14.45□□□□□ -0.1
SMARCD2-206ENST00000577990 SS18Q15532 418 aa14.44□□□□□ -0.1
SMARCD2-206ENST00000577990 LINC01620Q4KN68 170 aa14.44□□□□□ -0.1
SMARCD2-206ENST00000577990 CCL25O15444 150 aa14.43□□□□□ -0.1
SMARCD2-206ENST00000577990 XCL1P47992 114 aa14.43□□□□□ -0.1
SMARCD2-206ENST00000577990 FOXI1Q12951 378 aa14.43□□□□□ -0.1
SMARCD2-206ENST00000577990 Q6ZUT4 128 aa14.43□□□□□ -0.1
SMARCD2-206ENST00000577990 SVBPQ8N300 66 aa14.43□□□□□ -0.1
SMARCD2-206ENST00000577990 Q8N8P6 123 aa14.43□□□□□ -0.1
SMARCD2-206ENST00000577990 GNB1LQ9BYB4 327 aa14.43□□□□□ -0.1
SMARCD2-206ENST00000577990 hDV102S1A0JD36 115 aa14.42□□□□□ -0.1
SMARCD2-206ENST00000577990 SNAPINO95295 136 aa14.42□□□□□ -0.1
SMARCD2-206ENST00000577990 KIAA1644Q3SXP7 199 aa14.42□□□□□ -0.1
SMARCD2-206ENST00000577990 COX19Q49B96 90 aa14.42□□□□□ -0.1
SMARCD2-206ENST00000577990 RNASE13Q5GAN3 156 aaKnown RBP14.42□□□□□ -0.1
SMARCD2-206ENST00000577990 CFAP161Q6P656 301 aa14.42□□□□□ -0.1
SMARCD2-206ENST00000577990 SPANXA1Q9NS26 97 aa14.42□□□□□ -0.1
SMARCD2-206ENST00000577990 FAM30AQ9NZY2 134 aa14.42□□□□□ -0.1
SMARCD2-206ENST00000577990 C15orf56Q8N910 161 aa14.41□□□□□ -0.1
SMARCD2-206ENST00000577990 HAMPP81172 84 aa14.39□□□□□ -0.11
SMARCD2-206ENST00000577990 CD164L2Q6UWJ8 174 aa14.39□□□□□ -0.11
SMARCD2-206ENST00000577990 Q6ZSA8 131 aa14.39□□□□□ -0.11
SMARCD2-206ENST00000577990 AP5S1Q9NUS5 200 aa14.39□□□□□ -0.11
SMARCD2-206ENST00000577990 C1orf196B1AJZ1 125 aa14.38□□□□□ -0.11
SMARCD2-206ENST00000577990 EPM2AB3EWF7 344 aa14.38□□□□□ -0.11
SMARCD2-206ENST00000577990 MT-ND6P03923 174 aa14.38□□□□□ -0.11
SMARCD2-206ENST00000577990 MRPS36P82909 103 aaKnown RBP14.38□□□□□ -0.11
SMARCD2-206ENST00000577990 NXT2Q9NPJ8 142 aaKnown RBP14.38□□□□□ -0.11
SMARCD2-206ENST00000577990 TRAV13-1A0A0B4J241 112 aa14.37□□□□□ -0.11
SMARCD2-206ENST00000577990 K7EMI3 77 aa14.37□□□□□ -0.11
SMARCD2-206ENST00000577990 CNBPP62633 177 aaKnown RBP14.37□□□□□ -0.11
SMARCD2-206ENST00000577990 FAM104AQ969W3 186 aa14.37□□□□□ -0.11
SMARCD2-206ENST00000577990 VPS13BQ7Z7G8 4022 aa14.36□□□□□ -0.11
SMARCD2-206ENST00000577990 IFI27P40305 119 aaPredicted RBP14.36□□□□□ -0.11
SMARCD2-206ENST00000577990 ORMDL2Q53FV1 153 aa14.36□□□□□ -0.11
SMARCD2-206ENST00000577990 C9orf163Q8N9P6 203 aa14.36□□□□□ -0.11
SMARCD2-206ENST00000577990 OPRPNQ99935 248 aaPredicted RBP14.36□□□□□ -0.11
SMARCD2-206ENST00000577990 TGIF2-C20orf24A0A0A6YYL0 155 aa14.35□□□□□ -0.11
SMARCD2-206ENST00000577990 HIGD2BQ4VC39 106 aa14.35□□□□□ -0.11
SMARCD2-206ENST00000577990 MRPL18Q9H0U6 180 aaKnown RBP14.35□□□□□ -0.11
SMARCD2-206ENST00000577990 PYGO1Q9Y3Y4 419 aa14.35□□□□□ -0.11
SMARCD2-206ENST00000577990 GVQW2A0A096LPI5 108 aaPredicted RBP14.34□□□□□ -0.11
SMARCD2-206ENST00000577990 FABP9Q0Z7S8 132 aa14.34□□□□□ -0.11
SMARCD2-206ENST00000577990 ALKBH7Q9BT30 221 aaPredicted RBP14.34□□□□□ -0.11
SMARCD2-206ENST00000577990 CYSLTR1Q9Y271 337 aa14.34□□□□□ -0.11
SMARCD2-206ENST00000577990 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.33□□□□□ -0.12
SMARCD2-206ENST00000577990 IGHV1-58A0A0C4DH39 117 aa14.33□□□□□ -0.12
SMARCD2-206ENST00000577990 SMR3BP02814 79 aaPredicted RBP14.33□□□□□ -0.12
SMARCD2-206ENST00000577990 SLPIP03973 132 aa14.33□□□□□ -0.12
SMARCD2-206ENST00000577990 C2orf66Q6UXQ4 117 aa14.33□□□□□ -0.12
SMARCD2-206ENST00000577990 SRRM2Q9UQ35 2752 aaKnown RBP14.33□□□□□ -0.12
SMARCD2-206ENST00000577990 Q5VSD8 79 aa14.32□□□□□ -0.12
SMARCD2-206ENST00000577990 IGLV4-3A0A075B6K6 122 aa14.31□□□□□ -0.12
SMARCD2-206ENST00000577990 IFITM10A6NMD0 228 aa14.31□□□□□ -0.12
SMARCD2-206ENST00000577990 COX7A2LO14548 114 aa14.31□□□□□ -0.12
SMARCD2-206ENST00000577990 PRSS3P2Q8NHM4 247 aa14.3□□□□□ -0.12
SMARCD2-206ENST00000577990 TMEM141Q96I45 108 aa14.29□□□□□ -0.12
SMARCD2-206ENST00000577990 IGHV3-64A0A075B6Q5 118 aa14.28□□□□□ -0.12
SMARCD2-206ENST00000577990 MALP21145 153 aa14.28□□□□□ -0.12
SMARCD2-206ENST00000577990 G0S2P27469 103 aa14.28□□□□□ -0.12
SMARCD2-206ENST00000577990 FLG2Q5D862 2391 aaPredicted RBP14.28□□□□□ -0.12
SMARCD2-206ENST00000577990 SCXQ7RTU7 201 aa14.28□□□□□ -0.12
SMARCD2-206ENST00000577990 SLC7A5P1Q8MH63 180 aa14.28□□□□□ -0.12
SMARCD2-206ENST00000577990 CHAC1Q9BUX1 264 aa14.28□□□□□ -0.12
SMARCD2-206ENST00000577990 TRAPPC1Q9Y5R8 145 aa14.28□□□□□ -0.12
SMARCD2-206ENST00000577990 SDIM1Q6ZPB5 146 aa14.27□□□□□ -0.13
SMARCD2-206ENST00000577990 DMBT1Q9UGM3 2413 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms