RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 DNAH11Q96DT5 4516 aa6.97□□□□□ -1.29
CRLF3-202ENST00000577725 K7EMI3 77 aa6.96□□□□□ -1.3
CRLF3-202ENST00000577725 SMIM6P0DI80 62 aa6.96□□□□□ -1.3
CRLF3-202ENST00000577725 ZC2HC1BQ5TFG8 222 aa6.96□□□□□ -1.3
CRLF3-202ENST00000577725 CEMP1Q6PRD7 247 aaPredicted RBP6.96□□□□□ -1.3
CRLF3-202ENST00000577725 C20orf203Q8NBC4 194 aa6.96□□□□□ -1.3
CRLF3-202ENST00000577725 IFI27L1Q96BM0 104 aa6.96□□□□□ -1.3
CRLF3-202ENST00000577725 OPRPNQ99935 248 aaPredicted RBP6.96□□□□□ -1.3
CRLF3-202ENST00000577725 HSPB8Q9UJY1 196 aa6.96□□□□□ -1.3
CRLF3-202ENST00000577725 ICOSQ9Y6W8 199 aa6.96□□□□□ -1.3
CRLF3-202ENST00000577725 FAT2Q9NYQ8 4349 aa6.96□□□□□ -1.3
CRLF3-202ENST00000577725 TRAV10A0A0B4J240 114 aa6.95□□□□□ -1.3
CRLF3-202ENST00000577725 GAGE6Q13070 117 aa6.95□□□□□ -1.3
CRLF3-202ENST00000577725 Q8N976 141 aa6.95□□□□□ -1.3
CRLF3-202ENST00000577725 PMCHL2Q9BQD1 86 aa6.95□□□□□ -1.3
CRLF3-202ENST00000577725 DNAH2Q9P225 4427 aa6.94□□□□□ -1.3
CRLF3-202ENST00000577725 SCGB1D1O95968 90 aa6.94□□□□□ -1.3
CRLF3-202ENST00000577725 MRPL23Q16540 153 aaKnown RBP6.94□□□□□ -1.3
CRLF3-202ENST00000577725 RNASE13Q5GAN3 156 aaKnown RBP6.94□□□□□ -1.3
CRLF3-202ENST00000577725 PYY3Q5JQD4 70 aa6.94□□□□□ -1.3
CRLF3-202ENST00000577725 TMEM243Q9BU79 118 aa6.94□□□□□ -1.3
CRLF3-202ENST00000577725 MAP1LC3CQ9BXW4 147 aa6.94□□□□□ -1.3
CRLF3-202ENST00000577725 TRBV25-1A0A075B6N4 114 aa6.93□□□□□ -1.3
CRLF3-202ENST00000577725 IGIPA6NJ69 53 aa6.93□□□□□ -1.3
CRLF3-202ENST00000577725 SYS1-DBNDD2H3BUS1 97 aa6.93□□□□□ -1.3
CRLF3-202ENST00000577725 ATP5LO75964 103 aa6.93□□□□□ -1.3
CRLF3-202ENST00000577725 JOSD1Q15040 202 aaPredicted RBP6.93□□□□□ -1.3
CRLF3-202ENST00000577725 LINC00518Q8N0U6 118 aa6.93□□□□□ -1.3
CRLF3-202ENST00000577725 CHCHD5Q9BSY4 110 aa6.93□□□□□ -1.3
CRLF3-202ENST00000577725 GTSF1LQ9H1H1 148 aa6.93□□□□□ -1.3
CRLF3-202ENST00000577725 KLK5Q9Y337 293 aaPredicted RBP6.93□□□□□ -1.3
CRLF3-202ENST00000577725 DMBT1Q9UGM3 2413 aaPredicted RBP6.93□□□□□ -1.3
CRLF3-202ENST00000577725 IGLV4-3A0A075B6K6 122 aa6.92□□□□□ -1.3
CRLF3-202ENST00000577725 TRBV6-8A0A0A6YYG3 113 aa6.92□□□□□ -1.3
CRLF3-202ENST00000577725 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.92□□□□□ -1.3
CRLF3-202ENST00000577725 PRSS1P07477 247 aa6.92□□□□□ -1.3
CRLF3-202ENST00000577725 Q6ZN92 141 aa6.92□□□□□ -1.3
CRLF3-202ENST00000577725 Q6ZUT4 128 aa6.92□□□□□ -1.3
CRLF3-202ENST00000577725 ERASQ7Z444 233 aa6.92□□□□□ -1.3
CRLF3-202ENST00000577725 ATOH7Q8N100 152 aa6.92□□□□□ -1.3
CRLF3-202ENST00000577725 BAALCQ8WXS3 180 aa6.92□□□□□ -1.3
CRLF3-202ENST00000577725 UBE2D4Q9Y2X8 147 aa6.92□□□□□ -1.3
CRLF3-202ENST00000577725 IGLL5B9A064 214 aa6.91□□□□□ -1.3
CRLF3-202ENST00000577725 UBE2L6O14933 153 aa6.91□□□□□ -1.3
CRLF3-202ENST00000577725 FGF6P10767 208 aa6.91□□□□□ -1.3
CRLF3-202ENST00000577725 MALP21145 153 aa6.91□□□□□ -1.3
CRLF3-202ENST00000577725 G0S2P27469 103 aa6.91□□□□□ -1.3
CRLF3-202ENST00000577725 Q8N1X5 172 aa6.91□□□□□ -1.3
CRLF3-202ENST00000577725 Q8N3U1 123 aa6.91□□□□□ -1.3
CRLF3-202ENST00000577725 FAM104AQ969W3 186 aa6.91□□□□□ -1.3
CRLF3-202ENST00000577725 TMEM141Q96I45 108 aa6.91□□□□□ -1.3
CRLF3-202ENST00000577725 TIMM17AQ99595 171 aa6.91□□□□□ -1.3
CRLF3-202ENST00000577725 PRSS29PA6NIE9 313 aa6.9□□□□□ -1.3
CRLF3-202ENST00000577725 H3BNG1 76 aa6.9□□□□□ -1.3
CRLF3-202ENST00000577725 CDK2AP2O75956 126 aa6.9□□□□□ -1.3
CRLF3-202ENST00000577725 TMEM97Q5BJF2 176 aa6.9□□□□□ -1.3
CRLF3-202ENST00000577725 AMMECR1LQ6DCA0 310 aa6.9□□□□□ -1.3
CRLF3-202ENST00000577725 LYPD5Q6UWN5 251 aa6.9□□□□□ -1.3
CRLF3-202ENST00000577725 PET117Q6UWS5 81 aa6.9□□□□□ -1.3
CRLF3-202ENST00000577725 C12orf57Q99622 126 aa6.9□□□□□ -1.3
CRLF3-202ENST00000577725 SPANXA1Q9NS26 97 aa6.9□□□□□ -1.3
CRLF3-202ENST00000577725 IGLV4-60A0A075B6I1 120 aa6.89□□□□□ -1.31
CRLF3-202ENST00000577725 LINC01549A6NIU2 74 aa6.89□□□□□ -1.31
CRLF3-202ENST00000577725 TMEM262E9PQX1 116 aa6.89□□□□□ -1.31
CRLF3-202ENST00000577725 ESRGQ1W209 222 aa6.89□□□□□ -1.31
CRLF3-202ENST00000577725 LINC01545Q5VT33 79 aa6.89□□□□□ -1.31
CRLF3-202ENST00000577725 DGAT2L7PQ6IED9 249 aa6.89□□□□□ -1.31
CRLF3-202ENST00000577725 SH2D6Q7Z4S9 175 aa6.89□□□□□ -1.31
CRLF3-202ENST00000577725 MRPL35Q9NZE8 188 aaKnown RBP6.89□□□□□ -1.31
CRLF3-202ENST00000577725 PYGO1Q9Y3Y4 419 aa6.89□□□□□ -1.31
CRLF3-202ENST00000577725 A0A087WX48 190 aa6.88□□□□□ -1.31
CRLF3-202ENST00000577725 C20orf202A1L168 122 aa6.88□□□□□ -1.31
CRLF3-202ENST00000577725 MAJINQ3KP22 176 aa6.88□□□□□ -1.31
CRLF3-202ENST00000577725 MPV17L2Q567V2 206 aa6.88□□□□□ -1.31
CRLF3-202ENST00000577725 LELP1Q5T871 98 aa6.88□□□□□ -1.31
CRLF3-202ENST00000577725 OR5A1Q8NGJ0 315 aa6.88□□□□□ -1.31
CRLF3-202ENST00000577725 TIMM21Q9BVV7 248 aa6.88□□□□□ -1.31
CRLF3-202ENST00000577725 CST9LQ9H4G1 147 aa6.88□□□□□ -1.31
CRLF3-202ENST00000577725 CHTOPQ9Y3Y2 248 aaKnown RBP6.88□□□□□ -1.31
CRLF3-202ENST00000577725 PKD1P98161 4303 aa6.87□□□□□ -1.31
CRLF3-202ENST00000577725 TRAV12-1A0A0B4J245 112 aa6.87□□□□□ -1.31
CRLF3-202ENST00000577725 IGKV3OR2-268A0A0C4DH90 116 aa6.87□□□□□ -1.31
CRLF3-202ENST00000577725 hDV102S1A0JD36 115 aa6.87□□□□□ -1.31
CRLF3-202ENST00000577725 TCTAP57738 103 aa6.87□□□□□ -1.31
CRLF3-202ENST00000577725 RBX1P62877 108 aa6.87□□□□□ -1.31
CRLF3-202ENST00000577725 PMVKQ15126 192 aa6.87□□□□□ -1.31
CRLF3-202ENST00000577725 MRPL52Q86TS9 123 aaKnown RBP6.87□□□□□ -1.31
CRLF3-202ENST00000577725 C15orf53Q8NAA6 179 aa6.87□□□□□ -1.31
CRLF3-202ENST00000577725 TMEM101Q96IK0 257 aa6.87□□□□□ -1.31
CRLF3-202ENST00000577725 VCX2Q9H322 139 aa6.87□□□□□ -1.31
CRLF3-202ENST00000577725 A0A0J9YXV3 536 aa6.86□□□□□ -1.31
CRLF3-202ENST00000577725 H7C423 109 aa6.86□□□□□ -1.31
CRLF3-202ENST00000577725 MRPS36P82909 103 aaKnown RBP6.86□□□□□ -1.31
CRLF3-202ENST00000577725 CLPSL2Q6UWE3 100 aa6.86□□□□□ -1.31
CRLF3-202ENST00000577725 TEX43Q6ZNM6 134 aa6.86□□□□□ -1.31
CRLF3-202ENST00000577725 WFDC10BQ8IUB3 73 aa6.86□□□□□ -1.31
CRLF3-202ENST00000577725 AMELXQ99217 191 aa6.86□□□□□ -1.31
CRLF3-202ENST00000577725 IGLV4-69A0A075B6H9 119 aa6.85□□□□□ -1.31
CRLF3-202ENST00000577725 TRAV8-6A0A0B4J262 113 aa6.85□□□□□ -1.31
CRLF3-202ENST00000577725 C11orf86A6NJI1 115 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms