RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 CNFNQ9BYD5 112 aa7.36□□□□□ -1.23
CDH8-202ENST00000577228 RNASE7Q9H1E1 156 aaKnown RBP7.36□□□□□ -1.23
CDH8-202ENST00000577228 XCL1P47992 114 aa7.35□□□□□ -1.23
CDH8-202ENST00000577228 KRTAP10-8P60410 259 aa7.35□□□□□ -1.23
CDH8-202ENST00000577228 RPL23P62829 140 aaKnown RBP7.35□□□□□ -1.23
CDH8-202ENST00000577228 TMEM241Q24JQ0 296 aa7.35□□□□□ -1.23
CDH8-202ENST00000577228 CARD19Q96LW7 228 aa7.35□□□□□ -1.23
CDH8-202ENST00000577228 RPP21Q9H633 154 aaKnown RBP7.35□□□□□ -1.23
CDH8-202ENST00000577228 NAT8Q9UHE5 227 aa7.35□□□□□ -1.23
CDH8-202ENST00000577228 RNF213Q63HN8 5207 aa7.34□□□□□ -1.23
CDH8-202ENST00000577228 IGHV1-58A0A0C4DH39 117 aa7.34□□□□□ -1.23
CDH8-202ENST00000577228 TMEM218A2RU14 115 aa7.34□□□□□ -1.23
CDH8-202ENST00000577228 SDHAF1A6NFY7 115 aa7.34□□□□□ -1.23
CDH8-202ENST00000577228 ZNF25P17030 456 aaPredicted RBP7.34□□□□□ -1.23
CDH8-202ENST00000577228 ADCYAP1P18509 176 aa7.34□□□□□ -1.23
CDH8-202ENST00000577228 Q6ZRP5 223 aa7.34□□□□□ -1.23
CDH8-202ENST00000577228 SMIM15Q7Z3B0 74 aa7.34□□□□□ -1.23
CDH8-202ENST00000577228 OR5A1Q8NGJ0 315 aa7.34□□□□□ -1.23
CDH8-202ENST00000577228 LINC00526Q96FQ7 95 aa7.34□□□□□ -1.23
CDH8-202ENST00000577228 TMEM101Q96IK0 257 aa7.34□□□□□ -1.23
CDH8-202ENST00000577228 BTF3L4Q96K17 158 aa7.34□□□□□ -1.23
CDH8-202ENST00000577228 CCL25O15444 150 aa7.33□□□□□ -1.24
CDH8-202ENST00000577228 ADIRFQ15847 76 aa7.33□□□□□ -1.24
CDH8-202ENST00000577228 FAM231DQ6ZW35 169 aa7.33□□□□□ -1.24
CDH8-202ENST00000577228 ISOC2Q96AB3 205 aa7.33□□□□□ -1.24
CDH8-202ENST00000577228 LINC00959A0A1B0GUT2 108 aa7.32□□□□□ -1.24
CDH8-202ENST00000577228 PMCHP20382 165 aa7.32□□□□□ -1.24
CDH8-202ENST00000577228 FOXA3P55318 350 aaPredicted RBP7.32□□□□□ -1.24
CDH8-202ENST00000577228 SRSF9Q13242 221 aaKnown RBP eCLIP7.32□□□□□ -1.24
CDH8-202ENST00000577228 FAM231BA6NCW3 169 aa7.31□□□□□ -1.24
CDH8-202ENST00000577228 I3L3M4 83 aa7.31□□□□□ -1.24
CDH8-202ENST00000577228 ZNF561-AS1K7EIQ3 104 aa7.31□□□□□ -1.24
CDH8-202ENST00000577228 GATCO43716 136 aaKnown RBP7.31□□□□□ -1.24
CDH8-202ENST00000577228 SYCNQ0VAF6 134 aa7.31□□□□□ -1.24
CDH8-202ENST00000577228 SS18Q15532 418 aa7.31□□□□□ -1.24
CDH8-202ENST00000577228 OSTCQ9NRP0 149 aa7.31□□□□□ -1.24
CDH8-202ENST00000577228 F8W036 122 aa7.3□□□□□ -1.24
CDH8-202ENST00000577228 PTTG1IPP53801 180 aa7.3□□□□□ -1.24
CDH8-202ENST00000577228 SLC7A5P1Q8MH63 180 aa7.3□□□□□ -1.24
CDH8-202ENST00000577228 MRAP2Q96G30 205 aa7.3□□□□□ -1.24
CDH8-202ENST00000577228 TMEM242Q9NWH2 141 aa7.3□□□□□ -1.24
CDH8-202ENST00000577228 V9GYV3 84 aa7.3□□□□□ -1.24
CDH8-202ENST00000577228 TRBV6-5A0A0K0K1A5 114 aa7.29□□□□□ -1.24
CDH8-202ENST00000577228 LOC107984640A0A0U1RRK4 108 aa7.29□□□□□ -1.24
CDH8-202ENST00000577228 TSHBP01222 138 aa7.29□□□□□ -1.24
CDH8-202ENST00000577228 ESDP10768 282 aa7.29□□□□□ -1.24
CDH8-202ENST00000577228 CAMPP49913 170 aa7.29□□□□□ -1.24
CDH8-202ENST00000577228 GAGE2BQ13066 116 aa7.29□□□□□ -1.24
CDH8-202ENST00000577228 CT83Q5H943 113 aa7.29□□□□□ -1.24
CDH8-202ENST00000577228 C10orf91Q5T1B1 145 aa7.29□□□□□ -1.24
CDH8-202ENST00000577228 CD164L2Q6UWJ8 174 aa7.29□□□□□ -1.24
CDH8-202ENST00000577228 SEC11CQ9BY50 192 aa7.29□□□□□ -1.24
CDH8-202ENST00000577228 ST20Q9HBF5 79 aa7.29□□□□□ -1.24
CDH8-202ENST00000577228 GAS8-AS1O95177 125 aa7.28□□□□□ -1.24
CDH8-202ENST00000577228 PNRC1Q12796 327 aaPredicted RBP7.28□□□□□ -1.24
CDH8-202ENST00000577228 MRPL52Q86TS9 123 aaKnown RBP7.28□□□□□ -1.24
CDH8-202ENST00000577228 CDC42SE2Q9NRR3 84 aa7.28□□□□□ -1.24
CDH8-202ENST00000577228 IGLV4-69A0A075B6H9 119 aa7.27□□□□□ -1.25
CDH8-202ENST00000577228 A8MWL6 223 aa7.27□□□□□ -1.25
CDH8-202ENST00000577228 MALP21145 153 aa7.27□□□□□ -1.25
CDH8-202ENST00000577228 ZNF664Q8N3J9 261 aa7.27□□□□□ -1.25
CDH8-202ENST00000577228 TSKUQ8WUA8 353 aa7.27□□□□□ -1.25
CDH8-202ENST00000577228 CARHSP1Q9Y2V2 147 aaKnown RBP7.27□□□□□ -1.25
CDH8-202ENST00000577228 C7orf77A4D0Y5 90 aa7.26□□□□□ -1.25
CDH8-202ENST00000577228 COX7A2LO14548 114 aa7.26□□□□□ -1.25
CDH8-202ENST00000577228 MT-ND6P03923 174 aa7.26□□□□□ -1.25
CDH8-202ENST00000577228 BORCS7Q96B45 105 aa7.26□□□□□ -1.25
CDH8-202ENST00000577228 A0A1W2PNN7 141 aa7.25□□□□□ -1.25
CDH8-202ENST00000577228 SMIM27A0A1W2PRY6 76 aa7.25□□□□□ -1.25
CDH8-202ENST00000577228 HIGD1CA8MV81 97 aa7.25□□□□□ -1.25
CDH8-202ENST00000577228 C1orf196B1AJZ1 125 aa7.25□□□□□ -1.25
CDH8-202ENST00000577228 APOMO95445 188 aa7.25□□□□□ -1.25
CDH8-202ENST00000577228 NUP35Q8NFH5 326 aa7.25□□□□□ -1.25
CDH8-202ENST00000577228 CAMK2N2Q96S95 79 aa7.25□□□□□ -1.25
CDH8-202ENST00000577228 TRBV27A0A0K0K1C4 114 aa7.24□□□□□ -1.25
CDH8-202ENST00000577228 POLR2KP53803 58 aaKnown RBP7.24□□□□□ -1.25
CDH8-202ENST00000577228 C9orf116Q5BN46 136 aaPredicted RBP7.24□□□□□ -1.25
CDH8-202ENST00000577228 PSORS1C2Q9UIG4 136 aa7.24□□□□□ -1.25
CDH8-202ENST00000577228 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.23□□□□□ -1.25
CDH8-202ENST00000577228 PPP1R2P9O14990 202 aa7.23□□□□□ -1.25
CDH8-202ENST00000577228 MT-ND4LP03901 98 aa7.23□□□□□ -1.25
CDH8-202ENST00000577228 FCER1GP30273 86 aa7.23□□□□□ -1.25
CDH8-202ENST00000577228 RPL18AQ02543 176 aaKnown RBP7.23□□□□□ -1.25
CDH8-202ENST00000577228 NDUFA5Q16718 116 aa7.23□□□□□ -1.25
CDH8-202ENST00000577228 ANAPC16Q96DE5 110 aa7.23□□□□□ -1.25
CDH8-202ENST00000577228 TMEM191AQ9H0A3 160 aa7.23□□□□□ -1.25
CDH8-202ENST00000577228 TRAV13-1A0A0B4J241 112 aa7.22□□□□□ -1.25
CDH8-202ENST00000577228 A0A1B0GUT8 65 aa7.22□□□□□ -1.25
CDH8-202ENST00000577228 APOC3P02656 99 aa7.22□□□□□ -1.25
CDH8-202ENST00000577228 RAB4AP20338 218 aa7.22□□□□□ -1.25
CDH8-202ENST00000577228 SMAGPQ0VAQ4 97 aa7.22□□□□□ -1.25
CDH8-202ENST00000577228 RNASE13Q5GAN3 156 aaKnown RBP7.22□□□□□ -1.25
CDH8-202ENST00000577228 C1orf137Q5JT78 98 aa7.22□□□□□ -1.25
CDH8-202ENST00000577228 C2orf48Q96LS8 159 aa7.22□□□□□ -1.25
CDH8-202ENST00000577228 NAT8BQ9UHF3 227 aa7.22□□□□□ -1.25
CDH8-202ENST00000577228 VCYO14598 125 aa7.21□□□□□ -1.26
CDH8-202ENST00000577228 SPAG11BQ08648 103 aa7.21□□□□□ -1.26
CDH8-202ENST00000577228 PHF5AQ7RTV0 110 aaKnown RBP7.21□□□□□ -1.26
CDH8-202ENST00000577228 C5orf38Q86SI9 138 aa7.21□□□□□ -1.26
CDH8-202ENST00000577228 AMN1Q8IY45 258 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms