RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 GAGE12HA6NDE8 117 aa8.99□□□□□ -0.97
NDE1-211ENST00000576502 PPBPP02775 128 aa8.99□□□□□ -0.97
NDE1-211ENST00000576502 MT-ND4LP03901 98 aa8.99□□□□□ -0.97
NDE1-211ENST00000576502 CNBPP62633 177 aaKnown RBP8.99□□□□□ -0.97
NDE1-211ENST00000576502 MRPL51Q4U2R6 128 aaKnown RBP8.99□□□□□ -0.97
NDE1-211ENST00000576502 MRPL54Q6P161 138 aaKnown RBP8.99□□□□□ -0.97
NDE1-211ENST00000576502 UQCC3Q6UW78 93 aa8.99□□□□□ -0.97
NDE1-211ENST00000576502 MRPL52Q86TS9 123 aaKnown RBP8.99□□□□□ -0.97
NDE1-211ENST00000576502 C9orf163Q8N9P6 203 aa8.99□□□□□ -0.97
NDE1-211ENST00000576502 CHCHD10Q8WYQ3 142 aaPredicted RBP8.99□□□□□ -0.97
NDE1-211ENST00000576502 ANAPC16Q96DE5 110 aa8.99□□□□□ -0.97
NDE1-211ENST00000576502 SMKR1H3BMG3 65 aa8.98□□□□□ -0.97
NDE1-211ENST00000576502 GAS8-AS1O95177 125 aa8.98□□□□□ -0.97
NDE1-211ENST00000576502 SS18Q15532 418 aa8.98□□□□□ -0.97
NDE1-211ENST00000576502 SCXQ7RTU7 201 aa8.98□□□□□ -0.97
NDE1-211ENST00000576502 LINC00528Q8N1L1 170 aa8.98□□□□□ -0.97
NDE1-211ENST00000576502 NRACQ8N912 160 aa8.98□□□□□ -0.97
NDE1-211ENST00000576502 TRBV24-1A0A075B6N3 115 aa8.97□□□□□ -0.97
NDE1-211ENST00000576502 PHOX2AO14813 284 aa8.97□□□□□ -0.97
NDE1-211ENST00000576502 RPL32P62910 135 aaKnown RBP8.97□□□□□ -0.97
NDE1-211ENST00000576502 IGHV3-64A0A075B6Q5 118 aa8.96□□□□□ -0.98
NDE1-211ENST00000576502 CCL25O15444 150 aa8.96□□□□□ -0.98
NDE1-211ENST00000576502 ZNF664Q8N3J9 261 aa8.96□□□□□ -0.98
NDE1-211ENST00000576502 PKIGQ9Y2B9 76 aa8.96□□□□□ -0.98
NDE1-211ENST00000576502 CSDC2Q9Y534 153 aaKnown RBP8.96□□□□□ -0.98
NDE1-211ENST00000576502 A0A1B0GXF2 115 aa8.95□□□□□ -0.98
NDE1-211ENST00000576502 D6R8Y8 96 aa8.95□□□□□ -0.98
NDE1-211ENST00000576502 TNFRSF6BO95407 300 aa8.95□□□□□ -0.98
NDE1-211ENST00000576502 ORMDL3Q8N138 153 aa8.95□□□□□ -0.98
NDE1-211ENST00000576502 CDC42SE2Q9NRR3 84 aa8.95□□□□□ -0.98
NDE1-211ENST00000576502 ABCA13Q86UQ4 5058 aa8.95□□□□□ -0.98
NDE1-211ENST00000576502 LINC00959A0A1B0GUT2 108 aa8.94□□□□□ -0.98
NDE1-211ENST00000576502 XCL1P47992 114 aa8.94□□□□□ -0.98
NDE1-211ENST00000576502 CIRBP-AS1Q8TBR5 109 aa8.94□□□□□ -0.98
NDE1-211ENST00000576502 SMIM2Q9BVW6 85 aa8.94□□□□□ -0.98
NDE1-211ENST00000576502 DNAH8Q96JB1 4490 aa8.93□□□□□ -0.98
NDE1-211ENST00000576502 IGHV1-58A0A0C4DH39 117 aa8.93□□□□□ -0.98
NDE1-211ENST00000576502 C1orf196B1AJZ1 125 aa8.93□□□□□ -0.98
NDE1-211ENST00000576502 CD164L2Q6UWJ8 174 aa8.93□□□□□ -0.98
NDE1-211ENST00000576502 TIMM21Q9BVV7 248 aa8.93□□□□□ -0.98
NDE1-211ENST00000576502 SEC11CQ9BY50 192 aa8.93□□□□□ -0.98
NDE1-211ENST00000576502 LAMTOR2Q9Y2Q5 125 aa8.93□□□□□ -0.98
NDE1-211ENST00000576502 GVQW2A0A096LPI5 108 aaPredicted RBP8.92□□□□□ -0.98
NDE1-211ENST00000576502 RAB5AP20339 215 aa8.92□□□□□ -0.98
NDE1-211ENST00000576502 FOXI1Q12951 378 aa8.92□□□□□ -0.98
NDE1-211ENST00000576502 C10orf91Q5T1B1 145 aa8.92□□□□□ -0.98
NDE1-211ENST00000576502 TMEM136Q6ZRR5 245 aa8.92□□□□□ -0.98
NDE1-211ENST00000576502 C15orf56Q8N910 161 aa8.92□□□□□ -0.98
NDE1-211ENST00000576502 DPH3Q96FX2 82 aa8.92□□□□□ -0.98
NDE1-211ENST00000576502 UBE2D4Q9Y2X8 147 aa8.92□□□□□ -0.98
NDE1-211ENST00000576502 HIGD2BQ4VC39 106 aa8.91□□□□□ -0.98
NDE1-211ENST00000576502 SDIM1Q6ZPB5 146 aa8.91□□□□□ -0.98
NDE1-211ENST00000576502 PRELID3AQ96N28 172 aa8.91□□□□□ -0.98
NDE1-211ENST00000576502 SPANXA1Q9NS26 97 aa8.91□□□□□ -0.98
NDE1-211ENST00000576502 ZNF561-AS1K7EIQ3 104 aa8.9□□□□□ -0.98
NDE1-211ENST00000576502 NPYP01303 97 aa8.9□□□□□ -0.98
NDE1-211ENST00000576502 MALP21145 153 aa8.9□□□□□ -0.98
NDE1-211ENST00000576502 FAT1Q14517 4588 aa8.9□□□□□ -0.98
NDE1-211ENST00000576502 VPS13BQ7Z7G8 4022 aa8.9□□□□□ -0.99
NDE1-211ENST00000576502 IMMP2LQ96T52 175 aa8.89□□□□□ -0.99
NDE1-211ENST00000576502 MAP1LC3AQ9H492 121 aa8.89□□□□□ -0.99
NDE1-211ENST00000576502 CARHSP1Q9Y2V2 147 aaKnown RBP8.89□□□□□ -0.99
NDE1-211ENST00000576502 FLG2Q5D862 2391 aaPredicted RBP8.88□□□□□ -0.99
NDE1-211ENST00000576502 TRAV13-1A0A0B4J241 112 aa8.88□□□□□ -0.99
NDE1-211ENST00000576502 COX7A2LO14548 114 aa8.88□□□□□ -0.99
NDE1-211ENST00000576502 APOMO95445 188 aa8.88□□□□□ -0.99
NDE1-211ENST00000576502 CTDSP1Q9GZU7 261 aa8.88□□□□□ -0.99
NDE1-211ENST00000576502 SLPIP03973 132 aa8.87□□□□□ -0.99
NDE1-211ENST00000576502 IFI27P40305 119 aaPredicted RBP8.87□□□□□ -0.99
NDE1-211ENST00000576502 CIRBPQ14011 172 aaKnown RBP8.87□□□□□ -0.99
NDE1-211ENST00000576502 Q6ZUT4 128 aa8.87□□□□□ -0.99
NDE1-211ENST00000576502 LINC00474Q9P2X8 69 aa8.87□□□□□ -0.99
NDE1-211ENST00000576502 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.87□□□□□ -0.99
NDE1-211ENST00000576502 DMBT1Q9UGM3 2413 aaPredicted RBP8.87□□□□□ -0.99
NDE1-211ENST00000576502 SRRM2Q9UQ35 2752 aaKnown RBP8.86□□□□□ -0.99
NDE1-211ENST00000576502 TRAV9-1A0A075B6T8 112 aa8.86□□□□□ -0.99
NDE1-211ENST00000576502 RPL37AP61513 92 aaKnown RBP8.86□□□□□ -0.99
NDE1-211ENST00000576502 MRPS36P82909 103 aaKnown RBP8.86□□□□□ -0.99
NDE1-211ENST00000576502 CARD19Q96LW7 228 aa8.86□□□□□ -0.99
NDE1-211ENST00000576502 PRSS47A8MTI9 375 aa8.85□□□□□ -0.99
NDE1-211ENST00000576502 K7EMI3 77 aa8.85□□□□□ -0.99
NDE1-211ENST00000576502 S100PP25815 95 aa8.85□□□□□ -0.99
NDE1-211ENST00000576502 G0S2P27469 103 aa8.85□□□□□ -0.99
NDE1-211ENST00000576502 RPL39P62891 51 aaKnown RBP8.85□□□□□ -0.99
NDE1-211ENST00000576502 COX6A2Q02221 97 aa8.85□□□□□ -0.99
NDE1-211ENST00000576502 RNASE13Q5GAN3 156 aaKnown RBP8.85□□□□□ -0.99
NDE1-211ENST00000576502 SLC7A5P1Q8MH63 180 aa8.85□□□□□ -0.99
NDE1-211ENST00000576502 SYCNQ0VAF6 134 aa8.84□□□□□ -0.99
NDE1-211ENST00000576502 ORMDL2Q53FV1 153 aa8.84□□□□□ -0.99
NDE1-211ENST00000576502 SPACA4Q8TDM5 124 aa8.84□□□□□ -0.99
NDE1-211ENST00000576502 LOC389332A0A1B0GUA5 103 aa8.83□□□□□ -1
NDE1-211ENST00000576502 IFITM10A6NMD0 228 aa8.83□□□□□ -1
NDE1-211ENST00000576502 J3QL48 77 aa8.83□□□□□ -1
NDE1-211ENST00000576502 APOC3P02656 99 aa8.83□□□□□ -1
NDE1-211ENST00000576502 Q8N8P6 123 aa8.83□□□□□ -1
NDE1-211ENST00000576502 C7orf33Q8WU49 177 aa8.83□□□□□ -1
NDE1-211ENST00000576502 NXT2Q9NPJ8 142 aaKnown RBP8.83□□□□□ -1
NDE1-211ENST00000576502 PYGO1Q9Y3Y4 419 aa8.83□□□□□ -1
NDE1-211ENST00000576502 A0A087WYN8 130 aa8.82□□□□□ -1
NDE1-211ENST00000576502 TGIF2-C20orf24A0A0A6YYL0 155 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms