RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 C7orf77A4D0Y5 90 aa10.63□□□□□ -0.71
TVP23B-207ENST00000574294 C9JQL5 133 aa10.63□□□□□ -0.71
TVP23B-207ENST00000574294 CHCHD10Q8WYQ3 142 aaPredicted RBP10.63□□□□□ -0.71
TVP23B-207ENST00000574294 KIR2DL4Q99706 377 aa10.63□□□□□ -0.71
TVP23B-207ENST00000574294 TMEM242Q9NWH2 141 aa10.63□□□□□ -0.71
TVP23B-207ENST00000574294 TCAPO15273 167 aa10.62□□□□□ -0.71
TVP23B-207ENST00000574294 GAS8-AS1O95177 125 aa10.62□□□□□ -0.71
TVP23B-207ENST00000574294 FCER1GP30273 86 aa10.62□□□□□ -0.71
TVP23B-207ENST00000574294 RPS10P46783 165 aaKnown RBP10.62□□□□□ -0.71
TVP23B-207ENST00000574294 SUMO2P61956 95 aaKnown RBP10.62□□□□□ -0.71
TVP23B-207ENST00000574294 FAM104BQ5XKR9 115 aa10.62□□□□□ -0.71
TVP23B-207ENST00000574294 CSDC2Q9Y534 153 aaKnown RBP10.61□□□□□ -0.71
TVP23B-207ENST00000574294 F8W036 122 aa10.6□□□□□ -0.71
TVP23B-207ENST00000574294 CCL25O15444 150 aa10.6□□□□□ -0.71
TVP23B-207ENST00000574294 SRSF3P84103 164 aaKnown RBP10.6□□□□□ -0.71
TVP23B-207ENST00000574294 SS18Q15532 418 aa10.6□□□□□ -0.71
TVP23B-207ENST00000574294 C15orf56Q8N910 161 aa10.6□□□□□ -0.71
TVP23B-207ENST00000574294 NRACQ8N912 160 aa10.6□□□□□ -0.71
TVP23B-207ENST00000574294 TMEM18Q96B42 140 aa10.6□□□□□ -0.71
TVP23B-207ENST00000574294 C20orf78Q9BR46 151 aa10.6□□□□□ -0.71
TVP23B-207ENST00000574294 PKIGQ9Y2B9 76 aa10.6□□□□□ -0.71
TVP23B-207ENST00000574294 GVQW2A0A096LPI5 108 aaPredicted RBP10.59□□□□□ -0.71
TVP23B-207ENST00000574294 LINC00959A0A1B0GUT2 108 aa10.59□□□□□ -0.71
TVP23B-207ENST00000574294 CAMPP49913 170 aa10.59□□□□□ -0.71
TVP23B-207ENST00000574294 RPL32P62910 135 aaKnown RBP10.59□□□□□ -0.71
TVP23B-207ENST00000574294 CIRBPQ14011 172 aaKnown RBP10.59□□□□□ -0.71
TVP23B-207ENST00000574294 MRPL51Q4U2R6 128 aaKnown RBP10.59□□□□□ -0.71
TVP23B-207ENST00000574294 ZNF664Q8N3J9 261 aa10.59□□□□□ -0.71
TVP23B-207ENST00000574294 CDC42SE2Q9NRR3 84 aa10.59□□□□□ -0.71
TVP23B-207ENST00000574294 TRBV24-1A0A075B6N3 115 aa10.58□□□□□ -0.72
TVP23B-207ENST00000574294 CKS2P33552 79 aa10.58□□□□□ -0.72
TVP23B-207ENST00000574294 RAB14P61106 215 aa10.58□□□□□ -0.72
TVP23B-207ENST00000574294 HBBP68871 147 aa10.58□□□□□ -0.72
TVP23B-207ENST00000574294 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.58□□□□□ -0.72
TVP23B-207ENST00000574294 SMKR1H3BMG3 65 aa10.57□□□□□ -0.72
TVP23B-207ENST00000574294 PPBPP02775 128 aa10.57□□□□□ -0.72
TVP23B-207ENST00000574294 SLPIP03973 132 aa10.57□□□□□ -0.72
TVP23B-207ENST00000574294 FOXI1Q12951 378 aa10.57□□□□□ -0.72
TVP23B-207ENST00000574294 MYCBP2O75592 4640 aa10.56□□□□□ -0.72
TVP23B-207ENST00000574294 IGHV1-58A0A0C4DH39 117 aa10.56□□□□□ -0.72
TVP23B-207ENST00000574294 KRTAP29-1A8MX34 341 aaPredicted RBP10.56□□□□□ -0.72
TVP23B-207ENST00000574294 C1orf196B1AJZ1 125 aa10.56□□□□□ -0.72
TVP23B-207ENST00000574294 PHOX2AO14813 284 aa10.56□□□□□ -0.72
TVP23B-207ENST00000574294 XCL1P47992 114 aa10.56□□□□□ -0.72
TVP23B-207ENST00000574294 PNRC1Q12796 327 aaPredicted RBP10.56□□□□□ -0.72
TVP23B-207ENST00000574294 CD164L2Q6UWJ8 174 aa10.56□□□□□ -0.72
TVP23B-207ENST00000574294 ATP5L2Q7Z4Y8 100 aa10.56□□□□□ -0.72
TVP23B-207ENST00000574294 DPH3Q96FX2 82 aa10.56□□□□□ -0.72
TVP23B-207ENST00000574294 TIMM21Q9BVV7 248 aa10.56□□□□□ -0.72
TVP23B-207ENST00000574294 KRTAP10-4P60372 401 aaPredicted RBP10.55□□□□□ -0.72
TVP23B-207ENST00000574294 RPL37AP61513 92 aaKnown RBP10.55□□□□□ -0.72
TVP23B-207ENST00000574294 A0A1B0GXF2 115 aa10.54□□□□□ -0.72
TVP23B-207ENST00000574294 HIGD2BQ4VC39 106 aa10.54□□□□□ -0.72
TVP23B-207ENST00000574294 TNFRSF6BO95407 300 aa10.53□□□□□ -0.72
TVP23B-207ENST00000574294 MRPL54Q6P161 138 aaKnown RBP10.53□□□□□ -0.72
TVP23B-207ENST00000574294 SPACA4Q8TDM5 124 aa10.53□□□□□ -0.72
TVP23B-207ENST00000574294 UBE2D4Q9Y2X8 147 aa10.53□□□□□ -0.72
TVP23B-207ENST00000574294 PANO1I0J062 215 aa10.52□□□□□ -0.73
TVP23B-207ENST00000574294 OXTP01178 125 aa10.52□□□□□ -0.73
TVP23B-207ENST00000574294 SMIM2Q9BVW6 85 aa10.52□□□□□ -0.73
TVP23B-207ENST00000574294 LINC00474Q9P2X8 69 aa10.52□□□□□ -0.73
TVP23B-207ENST00000574294 D6R8Y8 96 aa10.51□□□□□ -0.73
TVP23B-207ENST00000574294 ZNF561-AS1K7EIQ3 104 aa10.51□□□□□ -0.73
TVP23B-207ENST00000574294 MT-ND4LP03901 98 aa10.51□□□□□ -0.73
TVP23B-207ENST00000574294 COX6A2Q02221 97 aa10.51□□□□□ -0.73
TVP23B-207ENST00000574294 ORMDL3Q8N138 153 aa10.51□□□□□ -0.73
TVP23B-207ENST00000574294 ANAPC16Q96DE5 110 aa10.51□□□□□ -0.73
TVP23B-207ENST00000574294 A0A087WYN8 130 aa10.5□□□□□ -0.73
TVP23B-207ENST00000574294 SPANXA1Q9NS26 97 aa10.5□□□□□ -0.73
TVP23B-207ENST00000574294 PLAC8Q9NZF1 115 aa10.5□□□□□ -0.73
TVP23B-207ENST00000574294 COX7A2LO14548 114 aa10.49□□□□□ -0.73
TVP23B-207ENST00000574294 MALP21145 153 aa10.49□□□□□ -0.73
TVP23B-207ENST00000574294 LAMTOR2Q9Y2Q5 125 aa10.49□□□□□ -0.73
TVP23B-207ENST00000574294 HERC1Q15751 4861 aa10.49□□□□□ -0.73
TVP23B-207ENST00000574294 APOMO95445 188 aa10.48□□□□□ -0.73
TVP23B-207ENST00000574294 TMEM136Q6ZRR5 245 aa10.48□□□□□ -0.73
TVP23B-207ENST00000574294 C7orf33Q8WU49 177 aa10.48□□□□□ -0.73
TVP23B-207ENST00000574294 CARD19Q96LW7 228 aa10.48□□□□□ -0.73
TVP23B-207ENST00000574294 CHTF8P0CG12 524 aa10.47□□□□□ -0.73
TVP23B-207ENST00000574294 RAB5AP20339 215 aa10.47□□□□□ -0.73
TVP23B-207ENST00000574294 SYCNQ0VAF6 134 aa10.47□□□□□ -0.73
TVP23B-207ENST00000574294 PRSS3P2Q8NHM4 247 aa10.47□□□□□ -0.73
TVP23B-207ENST00000574294 TRAV13-1A0A0B4J241 112 aa10.46□□□□□ -0.73
TVP23B-207ENST00000574294 LOC100996750A0A140TA64 210 aa10.46□□□□□ -0.73
TVP23B-207ENST00000574294 NPYP01303 97 aa10.46□□□□□ -0.73
TVP23B-207ENST00000574294 MRPS36P82909 103 aaKnown RBP10.46□□□□□ -0.73
TVP23B-207ENST00000574294 MAJINQ3KP22 176 aa10.46□□□□□ -0.73
TVP23B-207ENST00000574294 CLLU1Q5K131 121 aa10.46□□□□□ -0.73
TVP23B-207ENST00000574294 Q6ZUT4 128 aa10.46□□□□□ -0.73
TVP23B-207ENST00000574294 PRELID3AQ96N28 172 aa10.46□□□□□ -0.73
TVP23B-207ENST00000574294 KRTAP4-6Q9BYQ5 205 aa10.46□□□□□ -0.73
TVP23B-207ENST00000574294 IGKV2-24A0A0C4DH68 120 aa10.45□□□□□ -0.74
TVP23B-207ENST00000574294 PRSS47A8MTI9 375 aa10.45□□□□□ -0.74
TVP23B-207ENST00000574294 LORP23490 312 aaPredicted RBP10.45□□□□□ -0.74
TVP23B-207ENST00000574294 C2orf48Q96LS8 159 aa10.44□□□□□ -0.74
TVP23B-207ENST00000574294 IGLV4-69A0A075B6H9 119 aa10.43□□□□□ -0.74
TVP23B-207ENST00000574294 F8WDY8 70 aa10.43□□□□□ -0.74
TVP23B-207ENST00000574294 IFI27P40305 119 aaPredicted RBP10.43□□□□□ -0.74
TVP23B-207ENST00000574294 RPL39P62891 51 aaKnown RBP10.43□□□□□ -0.74
TVP23B-207ENST00000574294 RNASE13Q5GAN3 156 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms