RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 TCAPO15273 167 aa10.62□□□□□ -0.71
TVP23B-206ENST00000574226 GAS8-AS1O95177 125 aa10.62□□□□□ -0.71
TVP23B-206ENST00000574226 FCER1GP30273 86 aa10.62□□□□□ -0.71
TVP23B-206ENST00000574226 RPS10P46783 165 aaKnown RBP10.62□□□□□ -0.71
TVP23B-206ENST00000574226 SUMO2P61956 95 aaKnown RBP10.62□□□□□ -0.71
TVP23B-206ENST00000574226 FAM104BQ5XKR9 115 aa10.62□□□□□ -0.71
TVP23B-206ENST00000574226 CSDC2Q9Y534 153 aaKnown RBP10.61□□□□□ -0.71
TVP23B-206ENST00000574226 F8W036 122 aa10.6□□□□□ -0.71
TVP23B-206ENST00000574226 CCL25O15444 150 aa10.6□□□□□ -0.71
TVP23B-206ENST00000574226 SRSF3P84103 164 aaKnown RBP10.6□□□□□ -0.71
TVP23B-206ENST00000574226 SS18Q15532 418 aa10.6□□□□□ -0.71
TVP23B-206ENST00000574226 C15orf56Q8N910 161 aa10.6□□□□□ -0.71
TVP23B-206ENST00000574226 NRACQ8N912 160 aa10.6□□□□□ -0.71
TVP23B-206ENST00000574226 TMEM18Q96B42 140 aa10.6□□□□□ -0.71
TVP23B-206ENST00000574226 C20orf78Q9BR46 151 aa10.6□□□□□ -0.71
TVP23B-206ENST00000574226 PKIGQ9Y2B9 76 aa10.6□□□□□ -0.71
TVP23B-206ENST00000574226 GVQW2A0A096LPI5 108 aaPredicted RBP10.59□□□□□ -0.71
TVP23B-206ENST00000574226 LINC00959A0A1B0GUT2 108 aa10.59□□□□□ -0.71
TVP23B-206ENST00000574226 CAMPP49913 170 aa10.59□□□□□ -0.71
TVP23B-206ENST00000574226 RPL32P62910 135 aaKnown RBP10.59□□□□□ -0.71
TVP23B-206ENST00000574226 CIRBPQ14011 172 aaKnown RBP10.59□□□□□ -0.71
TVP23B-206ENST00000574226 MRPL51Q4U2R6 128 aaKnown RBP10.59□□□□□ -0.71
TVP23B-206ENST00000574226 ZNF664Q8N3J9 261 aa10.59□□□□□ -0.71
TVP23B-206ENST00000574226 CDC42SE2Q9NRR3 84 aa10.59□□□□□ -0.71
TVP23B-206ENST00000574226 TRBV24-1A0A075B6N3 115 aa10.58□□□□□ -0.72
TVP23B-206ENST00000574226 CKS2P33552 79 aa10.58□□□□□ -0.72
TVP23B-206ENST00000574226 RAB14P61106 215 aa10.58□□□□□ -0.72
TVP23B-206ENST00000574226 HBBP68871 147 aa10.58□□□□□ -0.72
TVP23B-206ENST00000574226 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.58□□□□□ -0.72
TVP23B-206ENST00000574226 SMKR1H3BMG3 65 aa10.57□□□□□ -0.72
TVP23B-206ENST00000574226 PPBPP02775 128 aa10.57□□□□□ -0.72
TVP23B-206ENST00000574226 SLPIP03973 132 aa10.57□□□□□ -0.72
TVP23B-206ENST00000574226 FOXI1Q12951 378 aa10.57□□□□□ -0.72
TVP23B-206ENST00000574226 MYCBP2O75592 4640 aa10.56□□□□□ -0.72
TVP23B-206ENST00000574226 IGHV1-58A0A0C4DH39 117 aa10.56□□□□□ -0.72
TVP23B-206ENST00000574226 KRTAP29-1A8MX34 341 aaPredicted RBP10.56□□□□□ -0.72
TVP23B-206ENST00000574226 C1orf196B1AJZ1 125 aa10.56□□□□□ -0.72
TVP23B-206ENST00000574226 J3QL48 77 aa10.56□□□□□ -0.72
TVP23B-206ENST00000574226 PHOX2AO14813 284 aa10.56□□□□□ -0.72
TVP23B-206ENST00000574226 XCL1P47992 114 aa10.56□□□□□ -0.72
TVP23B-206ENST00000574226 PNRC1Q12796 327 aaPredicted RBP10.56□□□□□ -0.72
TVP23B-206ENST00000574226 CD164L2Q6UWJ8 174 aa10.56□□□□□ -0.72
TVP23B-206ENST00000574226 ATP5L2Q7Z4Y8 100 aa10.56□□□□□ -0.72
TVP23B-206ENST00000574226 DPH3Q96FX2 82 aa10.56□□□□□ -0.72
TVP23B-206ENST00000574226 TIMM21Q9BVV7 248 aa10.56□□□□□ -0.72
TVP23B-206ENST00000574226 KRTAP10-4P60372 401 aaPredicted RBP10.55□□□□□ -0.72
TVP23B-206ENST00000574226 RPL37AP61513 92 aaKnown RBP10.55□□□□□ -0.72
TVP23B-206ENST00000574226 A0A1B0GXF2 115 aa10.54□□□□□ -0.72
TVP23B-206ENST00000574226 HIGD2BQ4VC39 106 aa10.54□□□□□ -0.72
TVP23B-206ENST00000574226 TNFRSF6BO95407 300 aa10.53□□□□□ -0.72
TVP23B-206ENST00000574226 MRPL54Q6P161 138 aaKnown RBP10.53□□□□□ -0.72
TVP23B-206ENST00000574226 SPACA4Q8TDM5 124 aa10.53□□□□□ -0.72
TVP23B-206ENST00000574226 UBE2D4Q9Y2X8 147 aa10.53□□□□□ -0.72
TVP23B-206ENST00000574226 PANO1I0J062 215 aa10.52□□□□□ -0.73
TVP23B-206ENST00000574226 OXTP01178 125 aa10.52□□□□□ -0.73
TVP23B-206ENST00000574226 SMIM2Q9BVW6 85 aa10.52□□□□□ -0.73
TVP23B-206ENST00000574226 LINC00474Q9P2X8 69 aa10.52□□□□□ -0.73
TVP23B-206ENST00000574226 D6R8Y8 96 aa10.51□□□□□ -0.73
TVP23B-206ENST00000574226 ZNF561-AS1K7EIQ3 104 aa10.51□□□□□ -0.73
TVP23B-206ENST00000574226 MT-ND4LP03901 98 aa10.51□□□□□ -0.73
TVP23B-206ENST00000574226 COX6A2Q02221 97 aa10.51□□□□□ -0.73
TVP23B-206ENST00000574226 ORMDL3Q8N138 153 aa10.51□□□□□ -0.73
TVP23B-206ENST00000574226 ANAPC16Q96DE5 110 aa10.51□□□□□ -0.73
TVP23B-206ENST00000574226 A0A087WYN8 130 aa10.5□□□□□ -0.73
TVP23B-206ENST00000574226 SPANXA1Q9NS26 97 aa10.5□□□□□ -0.73
TVP23B-206ENST00000574226 PLAC8Q9NZF1 115 aa10.5□□□□□ -0.73
TVP23B-206ENST00000574226 COX7A2LO14548 114 aa10.49□□□□□ -0.73
TVP23B-206ENST00000574226 MALP21145 153 aa10.49□□□□□ -0.73
TVP23B-206ENST00000574226 LAMTOR2Q9Y2Q5 125 aa10.49□□□□□ -0.73
TVP23B-206ENST00000574226 HERC1Q15751 4861 aa10.49□□□□□ -0.73
TVP23B-206ENST00000574226 APOMO95445 188 aa10.48□□□□□ -0.73
TVP23B-206ENST00000574226 TMEM136Q6ZRR5 245 aa10.48□□□□□ -0.73
TVP23B-206ENST00000574226 C7orf33Q8WU49 177 aa10.48□□□□□ -0.73
TVP23B-206ENST00000574226 CARD19Q96LW7 228 aa10.48□□□□□ -0.73
TVP23B-206ENST00000574226 CHTF8P0CG12 524 aa10.47□□□□□ -0.73
TVP23B-206ENST00000574226 RAB5AP20339 215 aa10.47□□□□□ -0.73
TVP23B-206ENST00000574226 SYCNQ0VAF6 134 aa10.47□□□□□ -0.73
TVP23B-206ENST00000574226 PRSS3P2Q8NHM4 247 aa10.47□□□□□ -0.73
TVP23B-206ENST00000574226 TRAV13-1A0A0B4J241 112 aa10.46□□□□□ -0.73
TVP23B-206ENST00000574226 NPYP01303 97 aa10.46□□□□□ -0.73
TVP23B-206ENST00000574226 MRPS36P82909 103 aaKnown RBP10.46□□□□□ -0.73
TVP23B-206ENST00000574226 MAJINQ3KP22 176 aa10.46□□□□□ -0.73
TVP23B-206ENST00000574226 CLLU1Q5K131 121 aa10.46□□□□□ -0.73
TVP23B-206ENST00000574226 Q6ZUT4 128 aa10.46□□□□□ -0.73
TVP23B-206ENST00000574226 PRELID3AQ96N28 172 aa10.46□□□□□ -0.73
TVP23B-206ENST00000574226 IGKV2-24A0A0C4DH68 120 aa10.45□□□□□ -0.74
TVP23B-206ENST00000574226 PRSS47A8MTI9 375 aa10.45□□□□□ -0.74
TVP23B-206ENST00000574226 C4orf48Q5BLP8 95 aa10.44□□□□□ -0.74
TVP23B-206ENST00000574226 C2orf48Q96LS8 159 aa10.44□□□□□ -0.74
TVP23B-206ENST00000574226 IGLV4-69A0A075B6H9 119 aa10.43□□□□□ -0.74
TVP23B-206ENST00000574226 F8WDY8 70 aa10.43□□□□□ -0.74
TVP23B-206ENST00000574226 IFI27P40305 119 aaPredicted RBP10.43□□□□□ -0.74
TVP23B-206ENST00000574226 RPL39P62891 51 aaKnown RBP10.43□□□□□ -0.74
TVP23B-206ENST00000574226 RNASE13Q5GAN3 156 aaKnown RBP10.43□□□□□ -0.74
TVP23B-206ENST00000574226 UQCC3Q6UW78 93 aa10.43□□□□□ -0.74
TVP23B-206ENST00000574226 STPG4Q8N801 248 aa10.43□□□□□ -0.74
TVP23B-206ENST00000574226 PYGO1Q9Y3Y4 419 aa10.43□□□□□ -0.74
TVP23B-206ENST00000574226 A0A096LNI7 61 aa10.42□□□□□ -0.74
TVP23B-206ENST00000574226 K7EMI3 77 aa10.42□□□□□ -0.74
TVP23B-206ENST00000574226 Q6ZRU5 148 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms