RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 RNASEKQ6P5S7 137 aaKnown RBP6.46□□□□□ -1.38
RPA1-206ENST00000573994 CIRBP-AS1Q8TBR5 109 aa6.46□□□□□ -1.38
RPA1-206ENST00000573994 ISOC2Q96AB3 205 aa6.46□□□□□ -1.38
RPA1-206ENST00000573994 TMEM242Q9NWH2 141 aa6.46□□□□□ -1.38
RPA1-206ENST00000573994 V9GYV3 84 aa6.46□□□□□ -1.38
RPA1-206ENST00000573994 FAT3Q8TDW7 4589 aa6.45□□□□□ -1.38
RPA1-206ENST00000573994 SMKR1H3BMG3 65 aa6.45□□□□□ -1.38
RPA1-206ENST00000573994 FGF6P10767 208 aa6.45□□□□□ -1.38
RPA1-206ENST00000573994 ZNF25P17030 456 aaPredicted RBP6.45□□□□□ -1.38
RPA1-206ENST00000573994 RPS10P46783 165 aaKnown RBP6.45□□□□□ -1.38
RPA1-206ENST00000573994 RPL23P62829 140 aaKnown RBP6.45□□□□□ -1.38
RPA1-206ENST00000573994 RIGQ13278 110 aa6.45□□□□□ -1.38
RPA1-206ENST00000573994 AMN1Q8IY45 258 aa6.45□□□□□ -1.38
RPA1-206ENST00000573994 MRAP2Q96G30 205 aa6.45□□□□□ -1.38
RPA1-206ENST00000573994 RNF185Q96GF1 192 aa6.45□□□□□ -1.38
RPA1-206ENST00000573994 LRP1Q07954 4544 aaKnown RBP6.45□□□□□ -1.38
RPA1-206ENST00000573994 PKHD1L1Q86WI1 4243 aa6.44□□□□□ -1.38
RPA1-206ENST00000573994 A0A1B0GW15 77 aa6.44□□□□□ -1.38
RPA1-206ENST00000573994 GAGE12HA6NDE8 117 aa6.44□□□□□ -1.38
RPA1-206ENST00000573994 TSHBP01222 138 aa6.44□□□□□ -1.38
RPA1-206ENST00000573994 PMCHP20382 165 aa6.44□□□□□ -1.38
RPA1-206ENST00000573994 CFAP161Q6P656 301 aa6.44□□□□□ -1.38
RPA1-206ENST00000573994 C9orf163Q8N9P6 203 aa6.44□□□□□ -1.38
RPA1-206ENST00000573994 NUP35Q8NFH5 326 aa6.44□□□□□ -1.38
RPA1-206ENST00000573994 ST20Q9HBF5 79 aa6.44□□□□□ -1.38
RPA1-206ENST00000573994 NAT8Q9UHE5 227 aa6.44□□□□□ -1.38
RPA1-206ENST00000573994 NAT8BQ9UHF3 227 aa6.44□□□□□ -1.38
RPA1-206ENST00000573994 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.43□□□□□ -1.38
RPA1-206ENST00000573994 PANO1I0J062 215 aa6.43□□□□□ -1.38
RPA1-206ENST00000573994 RAB4AP20338 218 aa6.43□□□□□ -1.38
RPA1-206ENST00000573994 CNBPP62633 177 aaKnown RBP6.43□□□□□ -1.38
RPA1-206ENST00000573994 SMAGPQ0VAQ4 97 aa6.43□□□□□ -1.38
RPA1-206ENST00000573994 HIGD2BQ4VC39 106 aa6.43□□□□□ -1.38
RPA1-206ENST00000573994 BTF3L4Q96K17 158 aa6.43□□□□□ -1.38
RPA1-206ENST00000573994 TRBV27A0A0K0K1C4 114 aa6.42□□□□□ -1.38
RPA1-206ENST00000573994 C15orf56Q8N910 161 aa6.42□□□□□ -1.38
RPA1-206ENST00000573994 CHCHD10Q8WYQ3 142 aaPredicted RBP6.42□□□□□ -1.38
RPA1-206ENST00000573994 TMEM101Q96IK0 257 aa6.42□□□□□ -1.38
RPA1-206ENST00000573994 PLA2G2DQ9UNK4 145 aa6.42□□□□□ -1.38
RPA1-206ENST00000573994 SMIM27A0A1W2PRY6 76 aa6.41□□□□□ -1.38
RPA1-206ENST00000573994 LINC00862A6NCI5 91 aa6.41□□□□□ -1.38
RPA1-206ENST00000573994 VCYO14598 125 aa6.41□□□□□ -1.38
RPA1-206ENST00000573994 PPP1R2P9O14990 202 aa6.41□□□□□ -1.38
RPA1-206ENST00000573994 SLPIP03973 132 aa6.41□□□□□ -1.38
RPA1-206ENST00000573994 S100A8P05109 93 aa6.41□□□□□ -1.38
RPA1-206ENST00000573994 ESDP10768 282 aa6.41□□□□□ -1.38
RPA1-206ENST00000573994 CAMPP49913 170 aa6.41□□□□□ -1.38
RPA1-206ENST00000573994 POLR2KP53803 58 aaKnown RBP6.41□□□□□ -1.38
RPA1-206ENST00000573994 OR5A1Q8NGJ0 315 aa6.41□□□□□ -1.38
RPA1-206ENST00000573994 TCAPO15273 167 aa6.4□□□□□ -1.38
RPA1-206ENST00000573994 CHTF8P0CG12 524 aa6.4□□□□□ -1.38
RPA1-206ENST00000573994 XCL1P47992 114 aa6.4□□□□□ -1.38
RPA1-206ENST00000573994 KRTAP10-4P60372 401 aaPredicted RBP6.4□□□□□ -1.38
RPA1-206ENST00000573994 SDIM1Q6ZPB5 146 aa6.4□□□□□ -1.38
RPA1-206ENST00000573994 MRPL52Q86TS9 123 aaKnown RBP6.4□□□□□ -1.38
RPA1-206ENST00000573994 NRACQ8N912 160 aa6.4□□□□□ -1.38
RPA1-206ENST00000573994 IGHV3-64A0A075B6Q5 118 aa6.39□□□□□ -1.39
RPA1-206ENST00000573994 C7orf77A4D0Y5 90 aa6.39□□□□□ -1.39
RPA1-206ENST00000573994 F8W036 122 aa6.39□□□□□ -1.39
RPA1-206ENST00000573994 CCL25O15444 150 aa6.39□□□□□ -1.39
RPA1-206ENST00000573994 FCER1GP30273 86 aa6.39□□□□□ -1.39
RPA1-206ENST00000573994 SUMO2P61956 95 aaKnown RBP6.39□□□□□ -1.39
RPA1-206ENST00000573994 FOXI1Q12951 378 aa6.39□□□□□ -1.39
RPA1-206ENST00000573994 MRPL51Q4U2R6 128 aaKnown RBP6.39□□□□□ -1.39
RPA1-206ENST00000573994 FAM104BQ5XKR9 115 aa6.39□□□□□ -1.39
RPA1-206ENST00000573994 MRPL54Q6P161 138 aaKnown RBP6.39□□□□□ -1.39
RPA1-206ENST00000573994 KIR2DL4Q99706 377 aa6.39□□□□□ -1.39
RPA1-206ENST00000573994 C20orf78Q9BR46 151 aa6.39□□□□□ -1.39
RPA1-206ENST00000573994 CSDC2Q9Y534 153 aaKnown RBP6.39□□□□□ -1.39
RPA1-206ENST00000573994 TRBV24-1A0A075B6N3 115 aa6.38□□□□□ -1.39
RPA1-206ENST00000573994 LINC00959A0A1B0GUT2 108 aa6.38□□□□□ -1.39
RPA1-206ENST00000573994 RAB14P61106 215 aa6.38□□□□□ -1.39
RPA1-206ENST00000573994 RPL37AP61513 92 aaKnown RBP6.38□□□□□ -1.39
RPA1-206ENST00000573994 RPL32P62910 135 aaKnown RBP6.38□□□□□ -1.39
RPA1-206ENST00000573994 RNASE13Q5GAN3 156 aaKnown RBP6.38□□□□□ -1.39
RPA1-206ENST00000573994 TMEM18Q96B42 140 aa6.38□□□□□ -1.39
RPA1-206ENST00000573994 PKIGQ9Y2B9 76 aa6.38□□□□□ -1.39
RPA1-206ENST00000573994 GVQW2A0A096LPI5 108 aaPredicted RBP6.37□□□□□ -1.39
RPA1-206ENST00000573994 PPBPP02775 128 aa6.37□□□□□ -1.39
RPA1-206ENST00000573994 HBBP68871 147 aa6.37□□□□□ -1.39
RPA1-206ENST00000573994 PNRC1Q12796 327 aaPredicted RBP6.37□□□□□ -1.39
RPA1-206ENST00000573994 SS18Q15532 418 aa6.37□□□□□ -1.39
RPA1-206ENST00000573994 ZNF664Q8N3J9 261 aa6.37□□□□□ -1.39
RPA1-206ENST00000573994 CDC42SE2Q9NRR3 84 aa6.37□□□□□ -1.39
RPA1-206ENST00000573994 A0A1B0GXF2 115 aa6.36□□□□□ -1.39
RPA1-206ENST00000573994 C9orf118A6NHY6 69 aa6.36□□□□□ -1.39
RPA1-206ENST00000573994 D6R8Y8 96 aa6.36□□□□□ -1.39
RPA1-206ENST00000573994 PHOX2AO14813 284 aa6.36□□□□□ -1.39
RPA1-206ENST00000573994 CKS2P33552 79 aa6.36□□□□□ -1.39
RPA1-206ENST00000573994 HNRNPA3P51991 378 aaKnown RBP6.36□□□□□ -1.39
RPA1-206ENST00000573994 COX6A2Q02221 97 aa6.36□□□□□ -1.39
RPA1-206ENST00000573994 CIRBPQ14011 172 aaKnown RBP6.36□□□□□ -1.39
RPA1-206ENST00000573994 Q6ZUT4 128 aa6.36□□□□□ -1.39
RPA1-206ENST00000573994 ATP5L2Q7Z4Y8 100 aa6.36□□□□□ -1.39
RPA1-206ENST00000573994 SPACA4Q8TDM5 124 aa6.36□□□□□ -1.39
RPA1-206ENST00000573994 LINC00526Q96FQ7 95 aa6.36□□□□□ -1.39
RPA1-206ENST00000573994 IGKV2-24A0A0C4DH68 120 aa6.35□□□□□ -1.39
RPA1-206ENST00000573994 C1orf196B1AJZ1 125 aa6.35□□□□□ -1.39
RPA1-206ENST00000573994 CD164L2Q6UWJ8 174 aa6.35□□□□□ -1.39
RPA1-206ENST00000573994 DPH3Q96FX2 82 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms