RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 MRPL51Q4U2R6 128 aaKnown RBP7.83□□□□□ -1.16
CCDC40-210ENST00000573903 IGHV3-64A0A075B6Q5 118 aa7.82□□□□□ -1.16
CCDC40-210ENST00000573903 TRBV27A0A0K0K1C4 114 aa7.82□□□□□ -1.16
CCDC40-210ENST00000573903 H7C423 109 aa7.82□□□□□ -1.16
CCDC40-210ENST00000573903 GAS8-AS1O95177 125 aa7.82□□□□□ -1.16
CCDC40-210ENST00000573903 SUMO2P61956 95 aaKnown RBP7.82□□□□□ -1.16
CCDC40-210ENST00000573903 CNBPP62633 177 aaKnown RBP7.82□□□□□ -1.16
CCDC40-210ENST00000573903 AMMECR1LQ6DCA0 310 aa7.82□□□□□ -1.16
CCDC40-210ENST00000573903 KRTAP26-1Q6PEX3 210 aa7.82□□□□□ -1.16
CCDC40-210ENST00000573903 SDIM1Q6ZPB5 146 aa7.82□□□□□ -1.16
CCDC40-210ENST00000573903 BTF3L4Q96K17 158 aa7.82□□□□□ -1.16
CCDC40-210ENST00000573903 CTDSP1Q9GZU7 261 aa7.82□□□□□ -1.16
CCDC40-210ENST00000573903 TMEM242Q9NWH2 141 aa7.82□□□□□ -1.16
CCDC40-210ENST00000573903 PPBPP02775 128 aa7.81□□□□□ -1.16
CCDC40-210ENST00000573903 FCER1GP30273 86 aa7.81□□□□□ -1.16
CCDC40-210ENST00000573903 HNRNPA3P51991 378 aaKnown RBP7.81□□□□□ -1.16
CCDC40-210ENST00000573903 POLR2KP53803 58 aaKnown RBP7.81□□□□□ -1.16
CCDC40-210ENST00000573903 NRACQ8N912 160 aa7.81□□□□□ -1.16
CCDC40-210ENST00000573903 C20orf203Q8NBC4 194 aa7.81□□□□□ -1.16
CCDC40-210ENST00000573903 IMMP2LQ96T52 175 aa7.81□□□□□ -1.16
CCDC40-210ENST00000573903 KIR2DL4Q99706 377 aa7.81□□□□□ -1.16
CCDC40-210ENST00000573903 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.8□□□□□ -1.16
CCDC40-210ENST00000573903 IGKV2-29A2NJV5 120 aaPredicted RBP7.8□□□□□ -1.16
CCDC40-210ENST00000573903 C7orf77A4D0Y5 90 aa7.8□□□□□ -1.16
CCDC40-210ENST00000573903 D6R8Y8 96 aa7.8□□□□□ -1.16
CCDC40-210ENST00000573903 VCYO14598 125 aa7.8□□□□□ -1.16
CCDC40-210ENST00000573903 TSHBP01222 138 aa7.8□□□□□ -1.16
CCDC40-210ENST00000573903 ZNF25P17030 456 aaPredicted RBP7.8□□□□□ -1.16
CCDC40-210ENST00000573903 RNASEKQ6P5S7 137 aaKnown RBP7.8□□□□□ -1.16
CCDC40-210ENST00000573903 Q6ZRU5 148 aa7.8□□□□□ -1.16
CCDC40-210ENST00000573903 ORMDL3Q8N138 153 aa7.8□□□□□ -1.16
CCDC40-210ENST00000573903 C20orf78Q9BR46 151 aa7.8□□□□□ -1.16
CCDC40-210ENST00000573903 LRP1Q07954 4544 aaKnown RBP7.79□□□□□ -1.16
CCDC40-210ENST00000573903 IGLV4-60A0A075B6I1 120 aa7.79□□□□□ -1.16
CCDC40-210ENST00000573903 TRBV24-1A0A075B6N3 115 aa7.79□□□□□ -1.16
CCDC40-210ENST00000573903 PANO1I0J062 215 aa7.79□□□□□ -1.16
CCDC40-210ENST00000573903 PHOX2AO14813 284 aa7.79□□□□□ -1.16
CCDC40-210ENST00000573903 TCAPO15273 167 aa7.79□□□□□ -1.16
CCDC40-210ENST00000573903 FGF6P10767 208 aa7.79□□□□□ -1.16
CCDC40-210ENST00000573903 SMAGPQ0VAQ4 97 aa7.79□□□□□ -1.16
CCDC40-210ENST00000573903 CIRBPQ14011 172 aaKnown RBP7.79□□□□□ -1.16
CCDC40-210ENST00000573903 TMEM101Q96IK0 257 aa7.79□□□□□ -1.16
CCDC40-210ENST00000573903 TRAV9-1A0A075B6T8 112 aa7.78□□□□□ -1.16
CCDC40-210ENST00000573903 TNFRSF6BO95407 300 aa7.78□□□□□ -1.16
CCDC40-210ENST00000573903 ESDP10768 282 aa7.78□□□□□ -1.16
CCDC40-210ENST00000573903 S100PP25815 95 aa7.78□□□□□ -1.16
CCDC40-210ENST00000573903 RPL32P62910 135 aaKnown RBP7.78□□□□□ -1.16
CCDC40-210ENST00000573903 RHEBQ15382 184 aa7.78□□□□□ -1.16
CCDC40-210ENST00000573903 CFAP161Q6P656 301 aa7.78□□□□□ -1.16
CCDC40-210ENST00000573903 C7orf33Q8WU49 177 aa7.78□□□□□ -1.16
CCDC40-210ENST00000573903 SMIM2Q9BVW6 85 aa7.78□□□□□ -1.16
CCDC40-210ENST00000573903 CARHSP1Q9Y2V2 147 aaKnown RBP7.78□□□□□ -1.16
CCDC40-210ENST00000573903 A0A087WYN8 130 aa7.77□□□□□ -1.17
CCDC40-210ENST00000573903 NPYP01303 97 aa7.77□□□□□ -1.17
CCDC40-210ENST00000573903 NDUFA5Q16718 116 aa7.77□□□□□ -1.17
CCDC40-210ENST00000573903 C10orf91Q5T1B1 145 aa7.77□□□□□ -1.17
CCDC40-210ENST00000573903 OR5A1Q8NGJ0 315 aa7.77□□□□□ -1.17
CCDC40-210ENST00000573903 TMEM18Q96B42 140 aa7.77□□□□□ -1.17
CCDC40-210ENST00000573903 LAMTOR2Q9Y2Q5 125 aa7.77□□□□□ -1.17
CCDC40-210ENST00000573903 IGKV3OR2-268A0A0C4DH90 116 aa7.76□□□□□ -1.17
CCDC40-210ENST00000573903 CHTF8P0CG12 524 aa7.76□□□□□ -1.17
CCDC40-210ENST00000573903 TMEM136Q6ZRR5 245 aa7.76□□□□□ -1.17
CCDC40-210ENST00000573903 MRPL52Q86TS9 123 aaKnown RBP7.76□□□□□ -1.17
CCDC40-210ENST00000573903 SPACA4Q8TDM5 124 aa7.76□□□□□ -1.17
CCDC40-210ENST00000573903 PRELID3AQ96N28 172 aa7.76□□□□□ -1.17
CCDC40-210ENST00000573903 FAT3Q8TDW7 4589 aa7.76□□□□□ -1.17
CCDC40-210ENST00000573903 GAGE12HA6NDE8 117 aa7.75□□□□□ -1.17
CCDC40-210ENST00000573903 PKHD1L1Q86WI1 4243 aa7.74□□□□□ -1.17
CCDC40-210ENST00000573903 MAP1LC3AQ9H492 121 aa7.74□□□□□ -1.17
CCDC40-210ENST00000573903 RPS10P5Q9NQ39 176 aa7.74□□□□□ -1.17
CCDC40-210ENST00000573903 APOC3P02656 99 aa7.73□□□□□ -1.17
CCDC40-210ENST00000573903 SLPIP03973 132 aa7.73□□□□□ -1.17
CCDC40-210ENST00000573903 MT1HL1P0DM35 61 aa7.73□□□□□ -1.17
CCDC40-210ENST00000573903 RAB5AP20339 215 aa7.73□□□□□ -1.17
CCDC40-210ENST00000573903 COX19Q49B96 90 aa7.73□□□□□ -1.17
CCDC40-210ENST00000573903 HIGD2BQ4VC39 106 aa7.73□□□□□ -1.17
CCDC40-210ENST00000573903 SVBPQ8N300 66 aa7.73□□□□□ -1.17
CCDC40-210ENST00000573903 C15orf56Q8N910 161 aa7.73□□□□□ -1.17
CCDC40-210ENST00000573903 PLAC8Q9NZF1 115 aa7.73□□□□□ -1.17
CCDC40-210ENST00000573903 PKIGQ9Y2B9 76 aa7.73□□□□□ -1.17
CCDC40-210ENST00000573903 SNAPINO95295 136 aa7.72□□□□□ -1.17
CCDC40-210ENST00000573903 COX6A2Q02221 97 aa7.72□□□□□ -1.17
CCDC40-210ENST00000573903 MAJINQ3KP22 176 aa7.72□□□□□ -1.17
CCDC40-210ENST00000573903 TIMM21Q9BVV7 248 aa7.72□□□□□ -1.17
CCDC40-210ENST00000573903 UBE2D4Q9Y2X8 147 aa7.72□□□□□ -1.17
CCDC40-210ENST00000573903 CSDC2Q9Y534 153 aaKnown RBP7.72□□□□□ -1.17
CCDC40-210ENST00000573903 HMCN2Q8NDA2 5059 aa7.72□□□□□ -1.17
CCDC40-210ENST00000573903 IGKV2-24A0A0C4DH68 120 aa7.71□□□□□ -1.18
CCDC40-210ENST00000573903 MT-ND6P03923 174 aa7.71□□□□□ -1.18
CCDC40-210ENST00000573903 ZNF664Q8N3J9 261 aa7.71□□□□□ -1.18
CCDC40-210ENST00000573903 CHCHD10Q8WYQ3 142 aaPredicted RBP7.71□□□□□ -1.18
CCDC40-210ENST00000573903 CDC42SE2Q9NRR3 84 aa7.71□□□□□ -1.18
CCDC40-210ENST00000573903 SPANXA1Q9NS26 97 aa7.71□□□□□ -1.18
CCDC40-210ENST00000573903 PRSS47A8MTI9 375 aa7.7□□□□□ -1.18
CCDC40-210ENST00000573903 SS18Q15532 418 aa7.7□□□□□ -1.18
CCDC40-210ENST00000573903 GVQW2A0A096LPI5 108 aaPredicted RBP7.69□□□□□ -1.18
CCDC40-210ENST00000573903 LOC389332A0A1B0GUA5 103 aa7.69□□□□□ -1.18
CCDC40-210ENST00000573903 LINC00959A0A1B0GUT2 108 aa7.69□□□□□ -1.18
CCDC40-210ENST00000573903 K7EMI3 77 aa7.69□□□□□ -1.18
CCDC40-210ENST00000573903 IFI27P40305 119 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms