RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 SDIM1Q6ZPB5 146 aa11.11□□□□□ -0.63
SMG6-212ENST00000573153 OR5A1Q8NGJ0 315 aa11.11□□□□□ -0.63
SMG6-212ENST00000573153 hDV102S1A0JD36 115 aa11.1□□□□□ -0.63
SMG6-212ENST00000573153 C7orf77A4D0Y5 90 aa11.1□□□□□ -0.63
SMG6-212ENST00000573153 GAGE12HA6NDE8 117 aa11.1□□□□□ -0.63
SMG6-212ENST00000573153 PLA2G1BP04054 148 aaKnown RBP11.1□□□□□ -0.63
SMG6-212ENST00000573153 S100A8P05109 93 aa11.1□□□□□ -0.63
SMG6-212ENST00000573153 C15orf56Q8N910 161 aa11.1□□□□□ -0.63
SMG6-212ENST00000573153 CHCHD10Q8WYQ3 142 aaPredicted RBP11.1□□□□□ -0.63
SMG6-212ENST00000573153 TMEM101Q96IK0 257 aa11.1□□□□□ -0.63
SMG6-212ENST00000573153 BTF3L4Q96K17 158 aa11.1□□□□□ -0.63
SMG6-212ENST00000573153 HBBP68871 147 aa11.09□□□□□ -0.63
SMG6-212ENST00000573153 CIRBPQ14011 172 aaKnown RBP11.09□□□□□ -0.63
SMG6-212ENST00000573153 CFAP161Q6P656 301 aa11.09□□□□□ -0.63
SMG6-212ENST00000573153 C20orf78Q9BR46 151 aa11.09□□□□□ -0.63
SMG6-212ENST00000573153 CSDC2Q9Y534 153 aaKnown RBP11.09□□□□□ -0.63
SMG6-212ENST00000573153 CAMPP49913 170 aa11.08□□□□□ -0.64
SMG6-212ENST00000573153 RAB14P61106 215 aa11.08□□□□□ -0.64
SMG6-212ENST00000573153 PNRC1Q12796 327 aaPredicted RBP11.08□□□□□ -0.64
SMG6-212ENST00000573153 CDC42SE2Q9NRR3 84 aa11.08□□□□□ -0.64
SMG6-212ENST00000573153 F8W036 122 aa11.07□□□□□ -0.64
SMG6-212ENST00000573153 FOXI1Q12951 378 aa11.07□□□□□ -0.64
SMG6-212ENST00000573153 ATP5L2Q7Z4Y8 100 aa11.07□□□□□ -0.64
SMG6-212ENST00000573153 KIR2DL4Q99706 377 aa11.07□□□□□ -0.64
SMG6-212ENST00000573153 AP5S1Q9NUS5 200 aa11.07□□□□□ -0.64
SMG6-212ENST00000573153 HMCN2Q8NDA2 5059 aa11.06□□□□□ -0.64
SMG6-212ENST00000573153 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.06□□□□□ -0.64
SMG6-212ENST00000573153 IGKV3OR2-268A0A0C4DH90 116 aa11.06□□□□□ -0.64
SMG6-212ENST00000573153 LINC00959A0A1B0GUT2 108 aa11.06□□□□□ -0.64
SMG6-212ENST00000573153 PHOX2AO14813 284 aa11.06□□□□□ -0.64
SMG6-212ENST00000573153 TCAPO15273 167 aa11.06□□□□□ -0.64
SMG6-212ENST00000573153 FCER1GP30273 86 aa11.06□□□□□ -0.64
SMG6-212ENST00000573153 SMAGPQ0VAQ4 97 aa11.06□□□□□ -0.64
SMG6-212ENST00000573153 GVQW2A0A096LPI5 108 aaPredicted RBP11.05□□□□□ -0.64
SMG6-212ENST00000573153 KRTAP29-1A8MX34 341 aaPredicted RBP11.05□□□□□ -0.64
SMG6-212ENST00000573153 PPBPP02775 128 aa11.05□□□□□ -0.64
SMG6-212ENST00000573153 CKS2P33552 79 aa11.05□□□□□ -0.64
SMG6-212ENST00000573153 HNRNPA3P51991 378 aaKnown RBP11.05□□□□□ -0.64
SMG6-212ENST00000573153 CLLU1Q5K131 121 aa11.05□□□□□ -0.64
SMG6-212ENST00000573153 MRPL54Q6P161 138 aaKnown RBP11.05□□□□□ -0.64
SMG6-212ENST00000573153 ZNF664Q8N3J9 261 aa11.05□□□□□ -0.64
SMG6-212ENST00000573153 TIMM21Q9BVV7 248 aa11.05□□□□□ -0.64
SMG6-212ENST00000573153 IGHV3-64A0A075B6Q5 118 aa11.04□□□□□ -0.64
SMG6-212ENST00000573153 TNFRSF6BO95407 300 aa11.04□□□□□ -0.64
SMG6-212ENST00000573153 UBE2D4Q9Y2X8 147 aa11.04□□□□□ -0.64
SMG6-212ENST00000573153 D6R8Y8 96 aa11.03□□□□□ -0.64
SMG6-212ENST00000573153 CCL25O15444 150 aa11.03□□□□□ -0.64
SMG6-212ENST00000573153 ANAPC16Q96DE5 110 aa11.03□□□□□ -0.64
SMG6-212ENST00000573153 SMIM2Q9BVW6 85 aa11.03□□□□□ -0.64
SMG6-212ENST00000573153 SS18Q15532 418 aa11.02□□□□□ -0.65
SMG6-212ENST00000573153 CD164L2Q6UWJ8 174 aa11.02□□□□□ -0.65
SMG6-212ENST00000573153 TMEM18Q96B42 140 aa11.02□□□□□ -0.65
SMG6-212ENST00000573153 MT-ND4LP03901 98 aa11.01□□□□□ -0.65
SMG6-212ENST00000573153 CHTF8P0CG12 524 aa11.01□□□□□ -0.65
SMG6-212ENST00000573153 XCL1P47992 114 aa11.01□□□□□ -0.65
SMG6-212ENST00000573153 IGHV1-58A0A0C4DH39 117 aa11□□□□□ -0.65
SMG6-212ENST00000573153 NPYP01303 97 aa11□□□□□ -0.65
SMG6-212ENST00000573153 PRSS47A8MTI9 375 aa10.99□□□□□ -0.65
SMG6-212ENST00000573153 C1orf196B1AJZ1 125 aa10.99□□□□□ -0.65
SMG6-212ENST00000573153 HIGD2BQ4VC39 106 aa10.99□□□□□ -0.65
SMG6-212ENST00000573153 ORMDL3Q8N138 153 aa10.99□□□□□ -0.65
SMG6-212ENST00000573153 SPACA4Q8TDM5 124 aa10.99□□□□□ -0.65
SMG6-212ENST00000573153 IFITM2Q01629 132 aa10.98□□□□□ -0.65
SMG6-212ENST00000573153 UQCC3Q6UW78 93 aa10.98□□□□□ -0.65
SMG6-212ENST00000573153 FAM104AQ969W3 186 aa10.98□□□□□ -0.65
SMG6-212ENST00000573153 LAMTOR2Q9Y2Q5 125 aa10.98□□□□□ -0.65
SMG6-212ENST00000573153 TMEM136Q6ZRR5 245 aa10.97□□□□□ -0.65
SMG6-212ENST00000573153 MRPS36P82909 103 aaKnown RBP10.96□□□□□ -0.65
SMG6-212ENST00000573153 Q6ZUT4 128 aa10.96□□□□□ -0.65
SMG6-212ENST00000573153 PRELID3AQ96N28 172 aa10.96□□□□□ -0.65
SMG6-212ENST00000573153 SPANXA1Q9NS26 97 aa10.96□□□□□ -0.65
SMG6-212ENST00000573153 A0A087WYN8 130 aa10.95□□□□□ -0.66
SMG6-212ENST00000573153 RPL37AP61513 92 aaKnown RBP10.95□□□□□ -0.66
SMG6-212ENST00000573153 RPL39P62891 51 aaKnown RBP10.95□□□□□ -0.66
SMG6-212ENST00000573153 IMMP2LQ96T52 175 aa10.95□□□□□ -0.66
SMG6-212ENST00000573153 PLAC8Q9NZF1 115 aa10.95□□□□□ -0.66
SMG6-212ENST00000573153 ADCYAP1P18509 176 aa10.94□□□□□ -0.66
SMG6-212ENST00000573153 COX6A2Q02221 97 aa10.94□□□□□ -0.66
SMG6-212ENST00000573153 PRSS3P2Q8NHM4 247 aa10.94□□□□□ -0.66
SMG6-212ENST00000573153 PKIGQ9Y2B9 76 aa10.94□□□□□ -0.66
SMG6-212ENST00000573153 TMEM218A2RU14 115 aa10.93□□□□□ -0.66
SMG6-212ENST00000573153 COX7A2LO14548 114 aa10.93□□□□□ -0.66
SMG6-212ENST00000573153 RNASE13Q5GAN3 156 aaKnown RBP10.93□□□□□ -0.66
SMG6-212ENST00000573153 TRAV13-1A0A0B4J241 112 aa10.92□□□□□ -0.66
SMG6-212ENST00000573153 J3QL48 77 aa10.92□□□□□ -0.66
SMG6-212ENST00000573153 PYGO1Q9Y3Y4 419 aa10.92□□□□□ -0.66
SMG6-212ENST00000573153 TNXBP22105 4242 aa10.92□□□□□ -0.66
SMG6-212ENST00000573153 ZNF561-AS1K7EIQ3 104 aa10.91□□□□□ -0.66
SMG6-212ENST00000573153 LINC00526Q96FQ7 95 aa10.91□□□□□ -0.66
SMG6-212ENST00000573153 CARD19Q96LW7 228 aa10.91□□□□□ -0.66
SMG6-212ENST00000573153 CTDSP1Q9GZU7 261 aa10.91□□□□□ -0.66
SMG6-212ENST00000573153 RAB5AP20339 215 aa10.9□□□□□ -0.66
SMG6-212ENST00000573153 SEC11CQ9BY50 192 aa10.9□□□□□ -0.66
SMG6-212ENST00000573153 LINC00474Q9P2X8 69 aa10.9□□□□□ -0.66
SMG6-212ENST00000573153 TRAV9-1A0A075B6T8 112 aa10.89□□□□□ -0.67
SMG6-212ENST00000573153 A0A096LNI7 61 aa10.89□□□□□ -0.67
SMG6-212ENST00000573153 OXTP01178 125 aa10.89□□□□□ -0.67
SMG6-212ENST00000573153 MALP21145 153 aa10.89□□□□□ -0.67
SMG6-212ENST00000573153 SYCNQ0VAF6 134 aa10.89□□□□□ -0.67
SMG6-212ENST00000573153 Q8N8P6 123 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms