RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 IGHV3-64A0A075B6Q5 118 aa11.12□□□□□ -0.63
RPA1-203ENST00000571058 FCER1GP30273 86 aa11.12□□□□□ -0.63
RPA1-203ENST00000571058 SDIM1Q6ZPB5 146 aa11.12□□□□□ -0.63
RPA1-203ENST00000571058 NRACQ8N912 160 aa11.11□□□□□ -0.63
RPA1-203ENST00000571058 F8W036 122 aa11.1□□□□□ -0.63
RPA1-203ENST00000571058 TCAPO15273 167 aa11.1□□□□□ -0.63
RPA1-203ENST00000571058 CAMPP49913 170 aa11.1□□□□□ -0.63
RPA1-203ENST00000571058 C15orf56Q8N910 161 aa11.1□□□□□ -0.63
RPA1-203ENST00000571058 C20orf78Q9BR46 151 aa11.1□□□□□ -0.63
RPA1-203ENST00000571058 CSDC2Q9Y534 153 aaKnown RBP11.1□□□□□ -0.63
RPA1-203ENST00000571058 SMKR1H3BMG3 65 aa11.09□□□□□ -0.63
RPA1-203ENST00000571058 RAB14P61106 215 aa11.09□□□□□ -0.63
RPA1-203ENST00000571058 RPL32P62910 135 aaKnown RBP11.09□□□□□ -0.63
RPA1-203ENST00000571058 HBBP68871 147 aa11.09□□□□□ -0.63
RPA1-203ENST00000571058 SS18Q15532 418 aa11.09□□□□□ -0.63
RPA1-203ENST00000571058 MRPL51Q4U2R6 128 aaKnown RBP11.09□□□□□ -0.63
RPA1-203ENST00000571058 CDC42SE2Q9NRR3 84 aa11.09□□□□□ -0.63
RPA1-203ENST00000571058 TRBV24-1A0A075B6N3 115 aa11.08□□□□□ -0.64
RPA1-203ENST00000571058 GVQW2A0A096LPI5 108 aaPredicted RBP11.08□□□□□ -0.64
RPA1-203ENST00000571058 LINC00959A0A1B0GUT2 108 aa11.08□□□□□ -0.64
RPA1-203ENST00000571058 CCL25O15444 150 aa11.08□□□□□ -0.64
RPA1-203ENST00000571058 CKS2P33552 79 aa11.08□□□□□ -0.64
RPA1-203ENST00000571058 FOXI1Q12951 378 aa11.08□□□□□ -0.64
RPA1-203ENST00000571058 CIRBPQ14011 172 aaKnown RBP11.08□□□□□ -0.64
RPA1-203ENST00000571058 ZNF664Q8N3J9 261 aa11.08□□□□□ -0.64
RPA1-203ENST00000571058 TMEM18Q96B42 140 aa11.08□□□□□ -0.64
RPA1-203ENST00000571058 MYCBP2O75592 4640 aa11.08□□□□□ -0.64
RPA1-203ENST00000571058 SLPIP03973 132 aa11.07□□□□□ -0.64
RPA1-203ENST00000571058 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.07□□□□□ -0.64
RPA1-203ENST00000571058 PPBPP02775 128 aa11.06□□□□□ -0.64
RPA1-203ENST00000571058 XCL1P47992 114 aa11.06□□□□□ -0.64
RPA1-203ENST00000571058 PNRC1Q12796 327 aaPredicted RBP11.06□□□□□ -0.64
RPA1-203ENST00000571058 CD164L2Q6UWJ8 174 aa11.06□□□□□ -0.64
RPA1-203ENST00000571058 ATP5L2Q7Z4Y8 100 aa11.06□□□□□ -0.64
RPA1-203ENST00000571058 PKIGQ9Y2B9 76 aa11.06□□□□□ -0.64
RPA1-203ENST00000571058 IGHV1-58A0A0C4DH39 117 aa11.05□□□□□ -0.64
RPA1-203ENST00000571058 A0A1B0GXF2 115 aa11.05□□□□□ -0.64
RPA1-203ENST00000571058 PHOX2AO14813 284 aa11.05□□□□□ -0.64
RPA1-203ENST00000571058 MRPL54Q6P161 138 aaKnown RBP11.05□□□□□ -0.64
RPA1-203ENST00000571058 TIMM21Q9BVV7 248 aa11.05□□□□□ -0.64
RPA1-203ENST00000571058 C1orf196B1AJZ1 125 aa11.04□□□□□ -0.64
RPA1-203ENST00000571058 TNFRSF6BO95407 300 aa11.04□□□□□ -0.64
RPA1-203ENST00000571058 KRTAP10-4P60372 401 aaPredicted RBP11.04□□□□□ -0.64
RPA1-203ENST00000571058 HIGD2BQ4VC39 106 aa11.04□□□□□ -0.64
RPA1-203ENST00000571058 UBE2D4Q9Y2X8 147 aa11.04□□□□□ -0.64
RPA1-203ENST00000571058 RPL37AP61513 92 aaKnown RBP11.03□□□□□ -0.64
RPA1-203ENST00000571058 ANAPC16Q96DE5 110 aa11.03□□□□□ -0.64
RPA1-203ENST00000571058 DPH3Q96FX2 82 aa11.03□□□□□ -0.64
RPA1-203ENST00000571058 KRTAP29-1A8MX34 341 aaPredicted RBP11.02□□□□□ -0.65
RPA1-203ENST00000571058 D6R8Y8 96 aa11.02□□□□□ -0.65
RPA1-203ENST00000571058 PANO1I0J062 215 aa11.02□□□□□ -0.65
RPA1-203ENST00000571058 J3QL48 77 aa11.02□□□□□ -0.65
RPA1-203ENST00000571058 SPACA4Q8TDM5 124 aa11.02□□□□□ -0.65
RPA1-203ENST00000571058 SMIM2Q9BVW6 85 aa11.02□□□□□ -0.65
RPA1-203ENST00000571058 MT-ND4LP03901 98 aa11.01□□□□□ -0.65
RPA1-203ENST00000571058 HERC1Q15751 4861 aa11.01□□□□□ -0.65
RPA1-203ENST00000571058 COX6A2Q02221 97 aa11□□□□□ -0.65
RPA1-203ENST00000571058 ORMDL3Q8N138 153 aa11□□□□□ -0.65
RPA1-203ENST00000571058 A0A087WYN8 130 aa10.99□□□□□ -0.65
RPA1-203ENST00000571058 ZNF561-AS1K7EIQ3 104 aa10.99□□□□□ -0.65
RPA1-203ENST00000571058 SPANXA1Q9NS26 97 aa10.99□□□□□ -0.65
RPA1-203ENST00000571058 LINC00474Q9P2X8 69 aa10.99□□□□□ -0.65
RPA1-203ENST00000571058 COX7A2LO14548 114 aa10.98□□□□□ -0.65
RPA1-203ENST00000571058 NPYP01303 97 aa10.98□□□□□ -0.65
RPA1-203ENST00000571058 MALP21145 153 aa10.98□□□□□ -0.65
RPA1-203ENST00000571058 CLLU1Q5K131 121 aa10.98□□□□□ -0.65
RPA1-203ENST00000571058 PLAC8Q9NZF1 115 aa10.98□□□□□ -0.65
RPA1-203ENST00000571058 LAMTOR2Q9Y2Q5 125 aa10.98□□□□□ -0.65
RPA1-203ENST00000571058 OXTP01178 125 aa10.97□□□□□ -0.65
RPA1-203ENST00000571058 CHTF8P0CG12 524 aa10.97□□□□□ -0.65
RPA1-203ENST00000571058 RAB5AP20339 215 aa10.97□□□□□ -0.65
RPA1-203ENST00000571058 TMEM136Q6ZRR5 245 aa10.97□□□□□ -0.65
RPA1-203ENST00000571058 CARD19Q96LW7 228 aa10.97□□□□□ -0.65
RPA1-203ENST00000571058 TRAV13-1A0A0B4J241 112 aa10.96□□□□□ -0.65
RPA1-203ENST00000571058 Q6ZUT4 128 aa10.96□□□□□ -0.65
RPA1-203ENST00000571058 PRSS3P2Q8NHM4 247 aa10.96□□□□□ -0.65
RPA1-203ENST00000571058 PRELID3AQ96N28 172 aa10.96□□□□□ -0.65
RPA1-203ENST00000571058 APOMO95445 188 aa10.95□□□□□ -0.66
RPA1-203ENST00000571058 MRPS36P82909 103 aaKnown RBP10.95□□□□□ -0.66
RPA1-203ENST00000571058 SYCNQ0VAF6 134 aa10.95□□□□□ -0.66
RPA1-203ENST00000571058 PRSS47A8MTI9 375 aa10.94□□□□□ -0.66
RPA1-203ENST00000571058 RPL39P62891 51 aaKnown RBP10.94□□□□□ -0.66
RPA1-203ENST00000571058 MAJINQ3KP22 176 aa10.94□□□□□ -0.66
RPA1-203ENST00000571058 RNASE13Q5GAN3 156 aaKnown RBP10.94□□□□□ -0.66
RPA1-203ENST00000571058 UQCC3Q6UW78 93 aa10.94□□□□□ -0.66
RPA1-203ENST00000571058 C7orf33Q8WU49 177 aa10.94□□□□□ -0.66
RPA1-203ENST00000571058 IGKV2-24A0A0C4DH68 120 aa10.93□□□□□ -0.66
RPA1-203ENST00000571058 IMMP2LQ96T52 175 aa10.93□□□□□ -0.66
RPA1-203ENST00000571058 IFI27P40305 119 aaPredicted RBP10.92□□□□□ -0.66
RPA1-203ENST00000571058 C2orf48Q96LS8 159 aa10.92□□□□□ -0.66
RPA1-203ENST00000571058 MAP1LC3AQ9H492 121 aa10.92□□□□□ -0.66
RPA1-203ENST00000571058 PYGO1Q9Y3Y4 419 aa10.92□□□□□ -0.66
RPA1-203ENST00000571058 A0A096LNI7 61 aa10.91□□□□□ -0.66
RPA1-203ENST00000571058 STPG4Q8N801 248 aa10.91□□□□□ -0.66
RPA1-203ENST00000571058 LINC00526Q96FQ7 95 aa10.91□□□□□ -0.66
RPA1-203ENST00000571058 IGLV4-69A0A075B6H9 119 aa10.9□□□□□ -0.66
RPA1-203ENST00000571058 F8WDY8 70 aa10.9□□□□□ -0.66
RPA1-203ENST00000571058 K7EMI3 77 aa10.9□□□□□ -0.66
RPA1-203ENST00000571058 C5orf38Q86SI9 138 aa10.9□□□□□ -0.66
RPA1-203ENST00000571058 OR10D4PQ8NGN7 298 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms