RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 SDHAF1A6NFY7 115 aa7.98□□□□□ -1.13
CTDNEP1-205ENST00000570828 ZNF727A8MUV8 499 aa7.98□□□□□ -1.13
CTDNEP1-205ENST00000570828 NDUFS6O75380 124 aaKnown RBP7.98□□□□□ -1.13
CTDNEP1-205ENST00000570828 PCP4P48539 62 aa7.98□□□□□ -1.13
CTDNEP1-205ENST00000570828 LINC01551Q86U37 167 aa7.98□□□□□ -1.13
CTDNEP1-205ENST00000570828 TSKUQ8WUA8 353 aa7.98□□□□□ -1.13
CTDNEP1-205ENST00000570828 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.97□□□□□ -1.13
CTDNEP1-205ENST00000570828 A0A1B0GUT8 65 aa7.97□□□□□ -1.13
CTDNEP1-205ENST00000570828 IGKV2-29A2NJV5 120 aaPredicted RBP7.97□□□□□ -1.13
CTDNEP1-205ENST00000570828 HIGD1CA8MV81 97 aa7.97□□□□□ -1.13
CTDNEP1-205ENST00000570828 CAMPP49913 170 aa7.97□□□□□ -1.13
CTDNEP1-205ENST00000570828 CNBPP62633 177 aaKnown RBP7.97□□□□□ -1.13
CTDNEP1-205ENST00000570828 RNASEKQ6P5S7 137 aaKnown RBP7.97□□□□□ -1.13
CTDNEP1-205ENST00000570828 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.96□□□□□ -1.14
CTDNEP1-205ENST00000570828 H7C423 109 aa7.96□□□□□ -1.14
CTDNEP1-205ENST00000570828 PMCHP20382 165 aa7.96□□□□□ -1.14
CTDNEP1-205ENST00000570828 SRSF3P84103 164 aaKnown RBP7.96□□□□□ -1.14
CTDNEP1-205ENST00000570828 IGHV3-64A0A075B6Q5 118 aa7.95□□□□□ -1.14
CTDNEP1-205ENST00000570828 TRBV6-5A0A0K0K1A5 114 aa7.95□□□□□ -1.14
CTDNEP1-205ENST00000570828 FAM231BA6NCW3 169 aa7.95□□□□□ -1.14
CTDNEP1-205ENST00000570828 GAGE12HA6NDE8 117 aa7.95□□□□□ -1.14
CTDNEP1-205ENST00000570828 I3L3M4 83 aa7.95□□□□□ -1.14
CTDNEP1-205ENST00000570828 SRP19P09132 144 aaKnown RBP7.95□□□□□ -1.14
CTDNEP1-205ENST00000570828 FGF6P10767 208 aa7.95□□□□□ -1.14
CTDNEP1-205ENST00000570828 TMEM191AQ9H0A3 160 aa7.95□□□□□ -1.14
CTDNEP1-205ENST00000570828 ST20Q9HBF5 79 aa7.95□□□□□ -1.14
CTDNEP1-205ENST00000570828 OSTCQ9NRP0 149 aa7.95□□□□□ -1.14
CTDNEP1-205ENST00000570828 CHTOPQ9Y3Y2 248 aaKnown RBP7.95□□□□□ -1.14
CTDNEP1-205ENST00000570828 ZNF25P17030 456 aaPredicted RBP7.94□□□□□ -1.14
CTDNEP1-205ENST00000570828 RPL37AP61513 92 aaKnown RBP7.94□□□□□ -1.14
CTDNEP1-205ENST00000570828 SDIM1Q6ZPB5 146 aa7.94□□□□□ -1.14
CTDNEP1-205ENST00000570828 MRAP2Q96G30 205 aa7.94□□□□□ -1.14
CTDNEP1-205ENST00000570828 TMEM101Q96IK0 257 aa7.94□□□□□ -1.14
CTDNEP1-205ENST00000570828 BTF3L4Q96K17 158 aa7.94□□□□□ -1.14
CTDNEP1-205ENST00000570828 KRTAP29-1A8MX34 341 aaPredicted RBP7.93□□□□□ -1.14
CTDNEP1-205ENST00000570828 KRTAP10-4P60372 401 aaPredicted RBP7.93□□□□□ -1.14
CTDNEP1-205ENST00000570828 RIGQ13278 110 aa7.93□□□□□ -1.14
CTDNEP1-205ENST00000570828 C15orf56Q8N910 161 aa7.93□□□□□ -1.14
CTDNEP1-205ENST00000570828 CHCHD10Q8WYQ3 142 aaPredicted RBP7.93□□□□□ -1.14
CTDNEP1-205ENST00000570828 TMEM242Q9NWH2 141 aa7.93□□□□□ -1.14
CTDNEP1-205ENST00000570828 PANO1I0J062 215 aa7.92□□□□□ -1.14
CTDNEP1-205ENST00000570828 GAS8-AS1O95177 125 aa7.92□□□□□ -1.14
CTDNEP1-205ENST00000570828 TSHBP01222 138 aa7.92□□□□□ -1.14
CTDNEP1-205ENST00000570828 TMEM241Q24JQ0 296 aa7.92□□□□□ -1.14
CTDNEP1-205ENST00000570828 FAM74A3Q4VXF1 159 aa7.92□□□□□ -1.14
CTDNEP1-205ENST00000570828 AMN1Q8IY45 258 aa7.92□□□□□ -1.14
CTDNEP1-205ENST00000570828 SLC7A5P1Q8MH63 180 aa7.92□□□□□ -1.14
CTDNEP1-205ENST00000570828 OR5A1Q8NGJ0 315 aa7.92□□□□□ -1.14
CTDNEP1-205ENST00000570828 RNF185Q96GF1 192 aa7.92□□□□□ -1.14
CTDNEP1-205ENST00000570828 V9GYV3 84 aa7.92□□□□□ -1.14
CTDNEP1-205ENST00000570828 RAB4AP20338 218 aa7.91□□□□□ -1.14
CTDNEP1-205ENST00000570828 RPS10P46783 165 aaKnown RBP7.91□□□□□ -1.14
CTDNEP1-205ENST00000570828 ADIRFQ15847 76 aa7.91□□□□□ -1.14
CTDNEP1-205ENST00000570828 HIGD2BQ4VC39 106 aa7.91□□□□□ -1.14
CTDNEP1-205ENST00000570828 NUP35Q8NFH5 326 aa7.91□□□□□ -1.14
CTDNEP1-205ENST00000570828 ISOC2Q96AB3 205 aa7.91□□□□□ -1.14
CTDNEP1-205ENST00000570828 DPH3Q96FX2 82 aa7.91□□□□□ -1.14
CTDNEP1-205ENST00000570828 NAT8BQ9UHF3 227 aa7.91□□□□□ -1.14
CTDNEP1-205ENST00000570828 PLA2G2DQ9UNK4 145 aa7.91□□□□□ -1.14
CTDNEP1-205ENST00000570828 TRBV27A0A0K0K1C4 114 aa7.9□□□□□ -1.14
CTDNEP1-205ENST00000570828 C7orf77A4D0Y5 90 aa7.9□□□□□ -1.14
CTDNEP1-205ENST00000570828 PPP1R17O96001 155 aa7.9□□□□□ -1.14
CTDNEP1-205ENST00000570828 SLPIP03973 132 aa7.9□□□□□ -1.14
CTDNEP1-205ENST00000570828 ESDP10768 282 aa7.9□□□□□ -1.14
CTDNEP1-205ENST00000570828 XCL1P47992 114 aa7.9□□□□□ -1.14
CTDNEP1-205ENST00000570828 RPL23P62829 140 aaKnown RBP7.9□□□□□ -1.14
CTDNEP1-205ENST00000570828 CIRBPQ14011 172 aaKnown RBP7.9□□□□□ -1.14
CTDNEP1-205ENST00000570828 NAT8Q9UHE5 227 aa7.9□□□□□ -1.14
CTDNEP1-205ENST00000570828 GVQW2A0A096LPI5 108 aaPredicted RBP7.89□□□□□ -1.15
CTDNEP1-205ENST00000570828 SMKR1H3BMG3 65 aa7.89□□□□□ -1.15
CTDNEP1-205ENST00000570828 CHTF8P0CG12 524 aa7.89□□□□□ -1.15
CTDNEP1-205ENST00000570828 FCER1GP30273 86 aa7.89□□□□□ -1.15
CTDNEP1-205ENST00000570828 POLR2KP53803 58 aaKnown RBP7.89□□□□□ -1.15
CTDNEP1-205ENST00000570828 IFITM2Q01629 132 aa7.89□□□□□ -1.15
CTDNEP1-205ENST00000570828 FOXI1Q12951 378 aa7.89□□□□□ -1.15
CTDNEP1-205ENST00000570828 PEA15Q15121 130 aa7.89□□□□□ -1.15
CTDNEP1-205ENST00000570828 LRP1Q07954 4544 aaKnown RBP7.88□□□□□ -1.15
CTDNEP1-205ENST00000570828 LINC00959A0A1B0GUT2 108 aa7.88□□□□□ -1.15
CTDNEP1-205ENST00000570828 VCYO14598 125 aa7.88□□□□□ -1.15
CTDNEP1-205ENST00000570828 CCL25O15444 150 aa7.88□□□□□ -1.15
CTDNEP1-205ENST00000570828 OXTP01178 125 aa7.88□□□□□ -1.15
CTDNEP1-205ENST00000570828 SUMO2P61956 95 aaKnown RBP7.88□□□□□ -1.15
CTDNEP1-205ENST00000570828 MRPL52Q86TS9 123 aaKnown RBP7.88□□□□□ -1.15
CTDNEP1-205ENST00000570828 SPACA4Q8TDM5 124 aa7.88□□□□□ -1.15
CTDNEP1-205ENST00000570828 A0A087WYN8 130 aa7.87□□□□□ -1.15
CTDNEP1-205ENST00000570828 C9JQL5 133 aa7.87□□□□□ -1.15
CTDNEP1-205ENST00000570828 PPP1R2P9O14990 202 aa7.87□□□□□ -1.15
CTDNEP1-205ENST00000570828 RAB14P61106 215 aa7.87□□□□□ -1.15
CTDNEP1-205ENST00000570828 COX6A2Q02221 97 aa7.87□□□□□ -1.15
CTDNEP1-205ENST00000570828 SMAGPQ0VAQ4 97 aa7.87□□□□□ -1.15
CTDNEP1-205ENST00000570828 SS18Q15532 418 aa7.87□□□□□ -1.15
CTDNEP1-205ENST00000570828 KIR2DL4Q99706 377 aa7.87□□□□□ -1.15
CTDNEP1-205ENST00000570828 IGHV1-58A0A0C4DH39 117 aa7.86□□□□□ -1.15
CTDNEP1-205ENST00000570828 A0A1B0GW15 77 aa7.86□□□□□ -1.15
CTDNEP1-205ENST00000570828 SMIM27A0A1W2PRY6 76 aa7.86□□□□□ -1.15
CTDNEP1-205ENST00000570828 F8WDY8 70 aa7.86□□□□□ -1.15
CTDNEP1-205ENST00000570828 FAM104BQ5XKR9 115 aa7.86□□□□□ -1.15
CTDNEP1-205ENST00000570828 ZNF664Q8N3J9 261 aa7.86□□□□□ -1.15
CTDNEP1-205ENST00000570828 NRACQ8N912 160 aa7.86□□□□□ -1.15
CTDNEP1-205ENST00000570828 SMDT1Q9H4I9 107 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms