RNA–Protein interactions for RNA: ENST00000570798.5

LITAF-204, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-204ENST00000570798 EPM2AB3EWF7 344 aa11.7□□□□□ -0.54
LITAF-204ENST00000570798 PPBPP02775 128 aa11.7□□□□□ -0.54
LITAF-204ENST00000570798 FCER1GP30273 86 aa11.7□□□□□ -0.54
LITAF-204ENST00000570798 CDC42SE2Q9NRR3 84 aa11.7□□□□□ -0.54
LITAF-204ENST00000570798 GAGE12HA6NDE8 117 aa11.69□□□□□ -0.54
LITAF-204ENST00000570798 PHOX2AO14813 284 aa11.69□□□□□ -0.54
LITAF-204ENST00000570798 NPYP01303 97 aa11.69□□□□□ -0.54
LITAF-204ENST00000570798 SMR3BP02814 79 aaPredicted RBP11.69□□□□□ -0.54
LITAF-204ENST00000570798 CHCHD10Q8WYQ3 142 aaPredicted RBP11.69□□□□□ -0.54
LITAF-204ENST00000570798 C9orf163Q8N9P6 203 aa11.68□□□□□ -0.54
LITAF-204ENST00000570798 SMIM2Q9BVW6 85 aa11.68□□□□□ -0.54
LITAF-204ENST00000570798 CSDC2Q9Y534 153 aaKnown RBP11.68□□□□□ -0.54
LITAF-204ENST00000570798 LINC00959A0A1B0GUT2 108 aa11.67□□□□□ -0.54
LITAF-204ENST00000570798 ORMDL3Q8N138 153 aa11.67□□□□□ -0.54
LITAF-204ENST00000570798 ZNF664Q8N3J9 261 aa11.67□□□□□ -0.54
LITAF-204ENST00000570798 UBE2D4Q9Y2X8 147 aa11.67□□□□□ -0.54
LITAF-204ENST00000570798 TCAPO15273 167 aa11.66□□□□□ -0.54
LITAF-204ENST00000570798 CNBPP62633 177 aaKnown RBP11.66□□□□□ -0.54
LITAF-204ENST00000570798 Q5VSD8 79 aa11.66□□□□□ -0.54
LITAF-204ENST00000570798 TMEM136Q6ZRR5 245 aa11.66□□□□□ -0.54
LITAF-204ENST00000570798 C15orf56Q8N910 161 aa11.66□□□□□ -0.54
LITAF-204ENST00000570798 IMMP2LQ96T52 175 aa11.66□□□□□ -0.54
LITAF-204ENST00000570798 SEC11CQ9BY50 192 aa11.66□□□□□ -0.54
LITAF-204ENST00000570798 FAT1Q14517 4588 aa11.66□□□□□ -0.54
LITAF-204ENST00000570798 hDV102S1A0JD36 115 aa11.65□□□□□ -0.54
LITAF-204ENST00000570798 FOXI1Q12951 378 aa11.65□□□□□ -0.54
LITAF-204ENST00000570798 COMMD7Q86VX2 200 aa11.65□□□□□ -0.54
LITAF-204ENST00000570798 TIMM21Q9BVV7 248 aa11.65□□□□□ -0.54
LITAF-204ENST00000570798 PRSS47A8MTI9 375 aa11.64□□□□□ -0.55
LITAF-204ENST00000570798 SLPIP03973 132 aa11.64□□□□□ -0.55
LITAF-204ENST00000570798 SMAGPQ0VAQ4 97 aa11.64□□□□□ -0.55
LITAF-204ENST00000570798 SCXQ7RTU7 201 aa11.64□□□□□ -0.55
LITAF-204ENST00000570798 PRELID3AQ96N28 172 aa11.64□□□□□ -0.55
LITAF-204ENST00000570798 CHAC1Q9BUX1 264 aa11.64□□□□□ -0.55
LITAF-204ENST00000570798 CTDSP1Q9GZU7 261 aa11.64□□□□□ -0.55
LITAF-204ENST00000570798 CCL25O15444 150 aa11.63□□□□□ -0.55
LITAF-204ENST00000570798 CFAP161Q6P656 301 aa11.63□□□□□ -0.55
LITAF-204ENST00000570798 TMEM18Q96B42 140 aa11.63□□□□□ -0.55
LITAF-204ENST00000570798 SS18Q15532 418 aa11.62□□□□□ -0.55
LITAF-204ENST00000570798 C10orf91Q5T1B1 145 aa11.62□□□□□ -0.55
LITAF-204ENST00000570798 SDIM1Q6ZPB5 146 aa11.62□□□□□ -0.55
LITAF-204ENST00000570798 LAMTOR2Q9Y2Q5 125 aa11.62□□□□□ -0.55
LITAF-204ENST00000570798 VPS13BQ7Z7G8 4022 aa11.61□□□□□ -0.55
LITAF-204ENST00000570798 FAM229AH3BQW9 127 aa11.61□□□□□ -0.55
LITAF-204ENST00000570798 XCL1P47992 114 aa11.61□□□□□ -0.55
LITAF-204ENST00000570798 RPL39P62891 51 aaKnown RBP11.61□□□□□ -0.55
LITAF-204ENST00000570798 AP5S1Q9NUS5 200 aa11.61□□□□□ -0.55
LITAF-204ENST00000570798 CD164L2Q6UWJ8 174 aa11.6□□□□□ -0.55
LITAF-204ENST00000570798 CIRBP-AS1Q8TBR5 109 aa11.6□□□□□ -0.55
LITAF-204ENST00000570798 FAM104AQ969W3 186 aa11.6□□□□□ -0.55
LITAF-204ENST00000570798 TRAV9-1A0A075B6T8 112 aa11.59□□□□□ -0.55
LITAF-204ENST00000570798 GVQW2A0A096LPI5 108 aaPredicted RBP11.59□□□□□ -0.55
LITAF-204ENST00000570798 RNASE13Q5GAN3 156 aaKnown RBP11.59□□□□□ -0.55
LITAF-204ENST00000570798 Q6ZUT4 128 aa11.59□□□□□ -0.55
LITAF-204ENST00000570798 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.58□□□□□ -0.56
LITAF-204ENST00000570798 C1orf196B1AJZ1 125 aa11.58□□□□□ -0.56
LITAF-204ENST00000570798 HIGD2BQ4VC39 106 aa11.58□□□□□ -0.56
LITAF-204ENST00000570798 SPANXA1Q9NS26 97 aa11.58□□□□□ -0.56
LITAF-204ENST00000570798 CARHSP1Q9Y2V2 147 aaKnown RBP11.58□□□□□ -0.56
LITAF-204ENST00000570798 LINC00528Q8N1L1 170 aa11.57□□□□□ -0.56
LITAF-204ENST00000570798 MAP1LC3AQ9H492 121 aa11.57□□□□□ -0.56
LITAF-204ENST00000570798 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.57□□□□□ -0.56
LITAF-204ENST00000570798 IGHV3-64A0A075B6Q5 118 aa11.56□□□□□ -0.56
LITAF-204ENST00000570798 IGHV1-58A0A0C4DH39 117 aa11.56□□□□□ -0.56
LITAF-204ENST00000570798 PANO1I0J062 215 aa11.56□□□□□ -0.56
LITAF-204ENST00000570798 INAFM2P0DMQ5 153 aa11.56□□□□□ -0.56
LITAF-204ENST00000570798 RAB5AP20339 215 aa11.56□□□□□ -0.56
LITAF-204ENST00000570798 MRPS36P82909 103 aaKnown RBP11.56□□□□□ -0.56
LITAF-204ENST00000570798 CIRBPQ14011 172 aaKnown RBP11.56□□□□□ -0.56
LITAF-204ENST00000570798 TRAV13-1A0A0B4J241 112 aa11.55□□□□□ -0.56
LITAF-204ENST00000570798 LOC389332A0A1B0GUA5 103 aa11.55□□□□□ -0.56
LITAF-204ENST00000570798 Q8N8P6 123 aa11.55□□□□□ -0.56
LITAF-204ENST00000570798 OPRPNQ99935 248 aaPredicted RBP11.55□□□□□ -0.56
LITAF-204ENST00000570798 PYGO1Q9Y3Y4 419 aa11.54□□□□□ -0.56
LITAF-204ENST00000570798 PLA2G1BP04054 148 aaKnown RBP11.52□□□□□ -0.57
LITAF-204ENST00000570798 S100PP25815 95 aa11.52□□□□□ -0.57
LITAF-204ENST00000570798 RHEBQ15382 184 aa11.52□□□□□ -0.57
LITAF-204ENST00000570798 K7EMI3 77 aa11.51□□□□□ -0.57
LITAF-204ENST00000570798 COX7A2LO14548 114 aa11.51□□□□□ -0.57
LITAF-204ENST00000570798 IFI27P40305 119 aaPredicted RBP11.51□□□□□ -0.57
LITAF-204ENST00000570798 KIAA1644Q3SXP7 199 aa11.51□□□□□ -0.57
LITAF-204ENST00000570798 GNB1LQ9BYB4 327 aa11.51□□□□□ -0.57
LITAF-204ENST00000570798 KRTAP10-4P60372 401 aaPredicted RBP11.5□□□□□ -0.57
LITAF-204ENST00000570798 LINC00526Q96FQ7 95 aa11.5□□□□□ -0.57
LITAF-204ENST00000570798 NXT2Q9NPJ8 142 aaKnown RBP11.5□□□□□ -0.57
LITAF-204ENST00000570798 RPS10P5Q9NQ39 176 aa11.5□□□□□ -0.57
LITAF-204ENST00000570798 IGLV4-3A0A075B6K6 122 aa11.49□□□□□ -0.57
LITAF-204ENST00000570798 CHTF8P0CG12 524 aa11.49□□□□□ -0.57
LITAF-204ENST00000570798 COX6A2Q02221 97 aa11.49□□□□□ -0.57
LITAF-204ENST00000570798 COX19Q49B96 90 aa11.49□□□□□ -0.57
LITAF-204ENST00000570798 ORMDL2Q53FV1 153 aa11.49□□□□□ -0.57
LITAF-204ENST00000570798 C2orf66Q6UXQ4 117 aa11.49□□□□□ -0.57
LITAF-204ENST00000570798 C5orf38Q86SI9 138 aa11.49□□□□□ -0.57
LITAF-204ENST00000570798 PRSS3P2Q8NHM4 247 aa11.49□□□□□ -0.57
LITAF-204ENST00000570798 SPACA4Q8TDM5 124 aa11.49□□□□□ -0.57
LITAF-204ENST00000570798 IGHV3OR16-9A0A0B4J2B5 98 aa11.48□□□□□ -0.57
LITAF-204ENST00000570798 ZNF561-AS1K7EIQ3 104 aa11.48□□□□□ -0.57
LITAF-204ENST00000570798 MALP21145 153 aa11.48□□□□□ -0.57
LITAF-204ENST00000570798 CYSLTR1Q9Y271 337 aa11.48□□□□□ -0.57
LITAF-204ENST00000570798 IFITM10A6NMD0 228 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms