RNA–Protein interactions for RNA: ENST00000570451.5

RPA1-202, Transcript of replication protein A1, humanhuman

TSL 3

Gene RPA1, Length 630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-202ENST00000570451 ST20Q9HBF5 79 aa13.39□□□□□ -0.27
RPA1-202ENST00000570451 A0A1B0GUT8 65 aa13.38□□□□□ -0.27
RPA1-202ENST00000570451 HIGD1CA8MV81 97 aa13.38□□□□□ -0.27
RPA1-202ENST00000570451 RPS10P46783 165 aaKnown RBP13.38□□□□□ -0.27
RPA1-202ENST00000570451 TSKUQ8WUA8 353 aa13.38□□□□□ -0.27
RPA1-202ENST00000570451 TMEM242Q9NWH2 141 aa13.38□□□□□ -0.27
RPA1-202ENST00000570451 TRBV6-5A0A0K0K1A5 114 aa13.37□□□□□ -0.27
RPA1-202ENST00000570451 ZNF25P17030 456 aaPredicted RBP13.37□□□□□ -0.27
RPA1-202ENST00000570451 XCL1P47992 114 aa13.37□□□□□ -0.27
RPA1-202ENST00000570451 COX6A2Q02221 97 aa13.37□□□□□ -0.27
RPA1-202ENST00000570451 PNRC1Q12796 327 aaPredicted RBP13.37□□□□□ -0.27
RPA1-202ENST00000570451 ISOC2Q96AB3 205 aa13.37□□□□□ -0.27
RPA1-202ENST00000570451 FAM231BA6NCW3 169 aa13.36□□□□□ -0.27
RPA1-202ENST00000570451 TSHBP01222 138 aa13.36□□□□□ -0.27
RPA1-202ENST00000570451 OR5A1Q8NGJ0 315 aa13.36□□□□□ -0.27
RPA1-202ENST00000570451 MRAP2Q96G30 205 aa13.36□□□□□ -0.27
RPA1-202ENST00000570451 FOXI1Q12951 378 aa13.35□□□□□ -0.27
RPA1-202ENST00000570451 TMEM191AQ9H0A3 160 aa13.35□□□□□ -0.27
RPA1-202ENST00000570451 GVQW2A0A096LPI5 108 aaPredicted RBP13.34□□□□□ -0.27
RPA1-202ENST00000570451 IGKV2-24A0A0C4DH68 120 aa13.34□□□□□ -0.27
RPA1-202ENST00000570451 PRSS3P2Q8NHM4 247 aa13.34□□□□□ -0.27
RPA1-202ENST00000570451 OSTCQ9NRP0 149 aa13.34□□□□□ -0.27
RPA1-202ENST00000570451 CARHSP1Q9Y2V2 147 aaKnown RBP13.34□□□□□ -0.27
RPA1-202ENST00000570451 CCL25O15444 150 aa13.33□□□□□ -0.28
RPA1-202ENST00000570451 RAB4AP20338 218 aa13.33□□□□□ -0.28
RPA1-202ENST00000570451 MAJINQ3KP22 176 aa13.33□□□□□ -0.28
RPA1-202ENST00000570451 C10orf91Q5T1B1 145 aa13.33□□□□□ -0.28
RPA1-202ENST00000570451 AMN1Q8IY45 258 aa13.33□□□□□ -0.28
RPA1-202ENST00000570451 PLAC8Q9NZF1 115 aa13.33□□□□□ -0.28
RPA1-202ENST00000570451 LINC00959A0A1B0GUT2 108 aa13.32□□□□□ -0.28
RPA1-202ENST00000570451 ESDP10768 282 aa13.32□□□□□ -0.28
RPA1-202ENST00000570451 C7orf33Q8WU49 177 aa13.32□□□□□ -0.28
RPA1-202ENST00000570451 SMKR1H3BMG3 65 aa13.31□□□□□ -0.28
RPA1-202ENST00000570451 PHOX2AO14813 284 aa13.3□□□□□ -0.28
RPA1-202ENST00000570451 APOC3P02656 99 aa13.3□□□□□ -0.28
RPA1-202ENST00000570451 POLR2KP53803 58 aaKnown RBP13.3□□□□□ -0.28
RPA1-202ENST00000570451 RIGQ13278 110 aa13.3□□□□□ -0.28
RPA1-202ENST00000570451 SS18Q15532 418 aa13.3□□□□□ -0.28
RPA1-202ENST00000570451 V9GYV3 84 aa13.3□□□□□ -0.28
RPA1-202ENST00000570451 TRBV27A0A0K0K1C4 114 aa13.29□□□□□ -0.28
RPA1-202ENST00000570451 C7orf77A4D0Y5 90 aa13.29□□□□□ -0.28
RPA1-202ENST00000570451 MT-ND4LP03901 98 aa13.29□□□□□ -0.28
RPA1-202ENST00000570451 FCER1GP30273 86 aa13.29□□□□□ -0.28
RPA1-202ENST00000570451 Q6ZRU5 148 aa13.29□□□□□ -0.28
RPA1-202ENST00000570451 NUP35Q8NFH5 326 aa13.29□□□□□ -0.28
RPA1-202ENST00000570451 LINC00526Q96FQ7 95 aa13.29□□□□□ -0.28
RPA1-202ENST00000570451 PLA2G2DQ9UNK4 145 aa13.29□□□□□ -0.28
RPA1-202ENST00000570451 IGHV1-58A0A0C4DH39 117 aa13.28□□□□□ -0.28
RPA1-202ENST00000570451 PPP1R2P9O14990 202 aa13.28□□□□□ -0.28
RPA1-202ENST00000570451 MRPL52Q86TS9 123 aaKnown RBP13.28□□□□□ -0.28
RPA1-202ENST00000570451 ZNF664Q8N3J9 261 aa13.28□□□□□ -0.28
RPA1-202ENST00000570451 STPG4Q8N801 248 aa13.28□□□□□ -0.28
RPA1-202ENST00000570451 CDC42SE2Q9NRR3 84 aa13.28□□□□□ -0.28
RPA1-202ENST00000570451 SVBPQ8N300 66 aa13.27□□□□□ -0.29
RPA1-202ENST00000570451 A0A096LNI7 61 aa13.26□□□□□ -0.29
RPA1-202ENST00000570451 VCYO14598 125 aa13.26□□□□□ -0.29
RPA1-202ENST00000570451 ANAPC16Q96DE5 110 aa13.26□□□□□ -0.29
RPA1-202ENST00000570451 CARD19Q96LW7 228 aa13.26□□□□□ -0.29
RPA1-202ENST00000570451 NAT8BQ9UHF3 227 aa13.26□□□□□ -0.29
RPA1-202ENST00000570451 UBR4Q5T4S7 5183 aa13.26□□□□□ -0.29
RPA1-202ENST00000570451 SNAPINO95295 136 aa13.25□□□□□ -0.29
RPA1-202ENST00000570451 CD164L2Q6UWJ8 174 aa13.25□□□□□ -0.29
RPA1-202ENST00000570451 ZNF561-AS1K7EIQ3 104 aa13.24□□□□□ -0.29
RPA1-202ENST00000570451 PPP1R17O96001 155 aa13.24□□□□□ -0.29
RPA1-202ENST00000570451 RHEBQ15382 184 aa13.24□□□□□ -0.29
RPA1-202ENST00000570451 SUMO2P61956 95 aaKnown RBP13.23□□□□□ -0.29
RPA1-202ENST00000570451 RNASE13Q5GAN3 156 aaKnown RBP13.23□□□□□ -0.29
RPA1-202ENST00000570451 NRACQ8N912 160 aa13.23□□□□□ -0.29
RPA1-202ENST00000570451 KIR2DL4Q99706 377 aa13.23□□□□□ -0.29
RPA1-202ENST00000570451 PKIGQ9Y2B9 76 aa13.23□□□□□ -0.29
RPA1-202ENST00000570451 MT1HL1P0DM35 61 aa13.22□□□□□ -0.29
RPA1-202ENST00000570451 MALP21145 153 aa13.22□□□□□ -0.29
RPA1-202ENST00000570451 SMAGPQ0VAQ4 97 aa13.22□□□□□ -0.29
RPA1-202ENST00000570451 CTDSP1Q9GZU7 261 aa13.22□□□□□ -0.29
RPA1-202ENST00000570451 RPS10P5Q9NQ39 176 aa13.22□□□□□ -0.29
RPA1-202ENST00000570451 LINC00474Q9P2X8 69 aa13.22□□□□□ -0.29
RPA1-202ENST00000570451 CAMPP49913 170 aa13.21□□□□□ -0.29
RPA1-202ENST00000570451 SYCNQ0VAF6 134 aa13.21□□□□□ -0.29
RPA1-202ENST00000570451 MRPL51Q4U2R6 128 aaKnown RBP13.21□□□□□ -0.29
RPA1-202ENST00000570451 C1orf196B1AJZ1 125 aa13.2□□□□□ -0.3
RPA1-202ENST00000570451 PRR3P79522 188 aaKnown RBP13.2□□□□□ -0.3
RPA1-202ENST00000570451 FAM104BQ5XKR9 115 aa13.2□□□□□ -0.3
RPA1-202ENST00000570451 UBE2D4Q9Y2X8 147 aa13.2□□□□□ -0.3
RPA1-202ENST00000570451 TNXBP22105 4242 aa13.2□□□□□ -0.3
RPA1-202ENST00000570451 TRAV13-1A0A0B4J241 112 aa13.19□□□□□ -0.3
RPA1-202ENST00000570451 SMIM27A0A1W2PRY6 76 aa13.19□□□□□ -0.3
RPA1-202ENST00000570451 COX7A2LO14548 114 aa13.19□□□□□ -0.3
RPA1-202ENST00000570451 IGLV4-69A0A075B6H9 119 aa13.17□□□□□ -0.3
RPA1-202ENST00000570451 ATP6V1G1O75348 118 aa13.17□□□□□ -0.3
RPA1-202ENST00000570451 CKS2P33552 79 aa13.17□□□□□ -0.3
RPA1-202ENST00000570451 Q6ZUT4 128 aa13.17□□□□□ -0.3
RPA1-202ENST00000570451 TMEM18Q96B42 140 aa13.17□□□□□ -0.3
RPA1-202ENST00000570451 CSDC2Q9Y534 153 aaKnown RBP13.17□□□□□ -0.3
RPA1-202ENST00000570451 A0A1B0GW15 77 aa13.15□□□□□ -0.3
RPA1-202ENST00000570451 GAGE2BQ13066 116 aa13.15□□□□□ -0.3
RPA1-202ENST00000570451 MRPL54Q6P161 138 aaKnown RBP13.15□□□□□ -0.3
RPA1-202ENST00000570451 IMMP2LQ96T52 175 aa13.15□□□□□ -0.3
RPA1-202ENST00000570451 C20orf78Q9BR46 151 aa13.15□□□□□ -0.3
RPA1-202ENST00000570451 LOC107984640A0A0U1RRK4 108 aa13.14□□□□□ -0.31
RPA1-202ENST00000570451 S100PP25815 95 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms