RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 Q8N1X5 172 aa9.04□□□□□ -0.96
HERPUD1-218ENST00000569569 SEC11CQ9BY50 192 aa9.04□□□□□ -0.96
HERPUD1-218ENST00000569569 IGKV3OR2-268A0A0C4DH90 116 aa9.03□□□□□ -0.96
HERPUD1-218ENST00000569569 PHOX2AO14813 284 aa9.03□□□□□ -0.96
HERPUD1-218ENST00000569569 COMMD7Q86VX2 200 aa9.03□□□□□ -0.96
HERPUD1-218ENST00000569569 KRTAP17-1Q9BYP8 105 aa9.03□□□□□ -0.96
HERPUD1-218ENST00000569569 DNAH8Q96JB1 4490 aa9.03□□□□□ -0.96
HERPUD1-218ENST00000569569 TCAPO15273 167 aa9.02□□□□□ -0.97
HERPUD1-218ENST00000569569 MRPL52Q86TS9 123 aaKnown RBP9.02□□□□□ -0.97
HERPUD1-218ENST00000569569 ORMDL3Q8N138 153 aa9.02□□□□□ -0.97
HERPUD1-218ENST00000569569 CLRN3Q8NCR9 226 aa9.02□□□□□ -0.97
HERPUD1-218ENST00000569569 OR5A1Q8NGJ0 315 aa9.02□□□□□ -0.97
HERPUD1-218ENST00000569569 IMMP2LQ96T52 175 aa9.02□□□□□ -0.97
HERPUD1-218ENST00000569569 PRSS1P07477 247 aa9.01□□□□□ -0.97
HERPUD1-218ENST00000569569 SMAGPQ0VAQ4 97 aa9.01□□□□□ -0.97
HERPUD1-218ENST00000569569 DGAT2L7PQ6IED9 249 aa9.01□□□□□ -0.97
HERPUD1-218ENST00000569569 TMEM136Q6ZRR5 245 aa9.01□□□□□ -0.97
HERPUD1-218ENST00000569569 TMEM18Q96B42 140 aa9.01□□□□□ -0.97
HERPUD1-218ENST00000569569 CTDSP1Q9GZU7 261 aa9.01□□□□□ -0.97
HERPUD1-218ENST00000569569 CDC42SE2Q9NRR3 84 aa9.01□□□□□ -0.97
HERPUD1-218ENST00000569569 FAM30AQ9NZY2 134 aa9.01□□□□□ -0.97
HERPUD1-218ENST00000569569 NPYP01303 97 aa9□□□□□ -0.97
HERPUD1-218ENST00000569569 CHCHD10Q8WYQ3 142 aaPredicted RBP9□□□□□ -0.97
HERPUD1-218ENST00000569569 PRELID3AQ96N28 172 aa9□□□□□ -0.97
HERPUD1-218ENST00000569569 SMIM2Q9BVW6 85 aa9□□□□□ -0.97
HERPUD1-218ENST00000569569 KRTAP4-5Q9BYR2 181 aa9□□□□□ -0.97
HERPUD1-218ENST00000569569 CSDC2Q9Y534 153 aaKnown RBP9□□□□□ -0.97
HERPUD1-218ENST00000569569 GAGE12HA6NDE8 117 aa8.99□□□□□ -0.97
HERPUD1-218ENST00000569569 LINC01620Q4KN68 170 aa8.99□□□□□ -0.97
HERPUD1-218ENST00000569569 Q6ZSA8 131 aa8.99□□□□□ -0.97
HERPUD1-218ENST00000569569 ZNF664Q8N3J9 261 aa8.99□□□□□ -0.97
HERPUD1-218ENST00000569569 LINC00959A0A1B0GUT2 108 aa8.98□□□□□ -0.97
HERPUD1-218ENST00000569569 C10orf91Q5T1B1 145 aa8.98□□□□□ -0.97
HERPUD1-218ENST00000569569 CFAP161Q6P656 301 aa8.98□□□□□ -0.97
HERPUD1-218ENST00000569569 LAMTOR2Q9Y2Q5 125 aa8.98□□□□□ -0.97
HERPUD1-218ENST00000569569 UBE2D4Q9Y2X8 147 aa8.98□□□□□ -0.97
HERPUD1-218ENST00000569569 TRAV9-1A0A075B6T8 112 aa8.97□□□□□ -0.97
HERPUD1-218ENST00000569569 hDV102S1A0JD36 115 aa8.97□□□□□ -0.97
HERPUD1-218ENST00000569569 PRSS47A8MTI9 375 aa8.97□□□□□ -0.97
HERPUD1-218ENST00000569569 SS18Q15532 418 aa8.97□□□□□ -0.97
HERPUD1-218ENST00000569569 TIMM21Q9BVV7 248 aa8.97□□□□□ -0.97
HERPUD1-218ENST00000569569 EPM2AB3EWF7 344 aa8.96□□□□□ -0.98
HERPUD1-218ENST00000569569 HAMPP81172 84 aa8.96□□□□□ -0.98
HERPUD1-218ENST00000569569 C9orf163Q8N9P6 203 aa8.96□□□□□ -0.98
HERPUD1-218ENST00000569569 AP5S1Q9NUS5 200 aa8.96□□□□□ -0.98
HERPUD1-218ENST00000569569 CCL25O15444 150 aa8.95□□□□□ -0.98
HERPUD1-218ENST00000569569 SMR3BP02814 79 aaPredicted RBP8.95□□□□□ -0.98
HERPUD1-218ENST00000569569 RAB5AP20339 215 aa8.95□□□□□ -0.98
HERPUD1-218ENST00000569569 S100PP25815 95 aa8.95□□□□□ -0.98
HERPUD1-218ENST00000569569 XCL1P47992 114 aa8.95□□□□□ -0.98
HERPUD1-218ENST00000569569 CNBPP62633 177 aaKnown RBP8.95□□□□□ -0.98
HERPUD1-218ENST00000569569 FOXI1Q12951 378 aa8.95□□□□□ -0.98
HERPUD1-218ENST00000569569 MAP1LC3AQ9H492 121 aa8.95□□□□□ -0.98
HERPUD1-218ENST00000569569 CARHSP1Q9Y2V2 147 aaKnown RBP8.95□□□□□ -0.98
HERPUD1-218ENST00000569569 C1orf196B1AJZ1 125 aa8.94□□□□□ -0.98
HERPUD1-218ENST00000569569 RPL39P62891 51 aaKnown RBP8.94□□□□□ -0.98
HERPUD1-218ENST00000569569 C15orf56Q8N910 161 aa8.94□□□□□ -0.98
HERPUD1-218ENST00000569569 FAT1Q14517 4588 aa8.93□□□□□ -0.98
HERPUD1-218ENST00000569569 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.93□□□□□ -0.98
HERPUD1-218ENST00000569569 LOC389332A0A1B0GUA5 103 aa8.93□□□□□ -0.98
HERPUD1-218ENST00000569569 RHEBQ15382 184 aa8.93□□□□□ -0.98
HERPUD1-218ENST00000569569 CD164L2Q6UWJ8 174 aa8.93□□□□□ -0.98
HERPUD1-218ENST00000569569 SPANXA1Q9NS26 97 aa8.93□□□□□ -0.98
HERPUD1-218ENST00000569569 FAM229AH3BQW9 127 aa8.92□□□□□ -0.98
HERPUD1-218ENST00000569569 SLPIP03973 132 aa8.92□□□□□ -0.98
HERPUD1-218ENST00000569569 RNASE13Q5GAN3 156 aaKnown RBP8.92□□□□□ -0.98
HERPUD1-218ENST00000569569 Q5VSD8 79 aa8.92□□□□□ -0.98
HERPUD1-218ENST00000569569 Q6ZUT4 128 aa8.92□□□□□ -0.98
HERPUD1-218ENST00000569569 Q8N8P6 123 aa8.92□□□□□ -0.98
HERPUD1-218ENST00000569569 CHAC1Q9BUX1 264 aa8.92□□□□□ -0.98
HERPUD1-218ENST00000569569 RPS10P5Q9NQ39 176 aa8.92□□□□□ -0.98
HERPUD1-218ENST00000569569 TRAV13-1A0A0B4J241 112 aa8.91□□□□□ -0.98
HERPUD1-218ENST00000569569 MRPS36P82909 103 aaKnown RBP8.91□□□□□ -0.98
HERPUD1-218ENST00000569569 COX19Q49B96 90 aa8.91□□□□□ -0.98
HERPUD1-218ENST00000569569 HIGD2BQ4VC39 106 aa8.91□□□□□ -0.98
HERPUD1-218ENST00000569569 SCXQ7RTU7 201 aa8.91□□□□□ -0.98
HERPUD1-218ENST00000569569 GNB1LQ9BYB4 327 aa8.91□□□□□ -0.98
HERPUD1-218ENST00000569569 GVQW2A0A096LPI5 108 aaPredicted RBP8.9□□□□□ -0.98
HERPUD1-218ENST00000569569 IGHV1-58A0A0C4DH39 117 aa8.9□□□□□ -0.98
HERPUD1-218ENST00000569569 K7EMI3 77 aa8.9□□□□□ -0.98
HERPUD1-218ENST00000569569 KIAA1644Q3SXP7 199 aa8.9□□□□□ -0.98
HERPUD1-218ENST00000569569 SDIM1Q6ZPB5 146 aa8.9□□□□□ -0.98
HERPUD1-218ENST00000569569 FAM104AQ969W3 186 aa8.9□□□□□ -0.98
HERPUD1-218ENST00000569569 PYGO1Q9Y3Y4 419 aa8.9□□□□□ -0.98
HERPUD1-218ENST00000569569 PCLOQ9Y6V0 5065 aa8.89□□□□□ -0.99
HERPUD1-218ENST00000569569 IGHV3-64A0A075B6Q5 118 aa8.89□□□□□ -0.99
HERPUD1-218ENST00000569569 IFI27P40305 119 aaPredicted RBP8.89□□□□□ -0.99
HERPUD1-218ENST00000569569 ORMDL2Q53FV1 153 aa8.89□□□□□ -0.99
HERPUD1-218ENST00000569569 CIRBP-AS1Q8TBR5 109 aa8.89□□□□□ -0.99
HERPUD1-218ENST00000569569 OPRPNQ99935 248 aaPredicted RBP8.89□□□□□ -0.99
HERPUD1-218ENST00000569569 NXT2Q9NPJ8 142 aaKnown RBP8.89□□□□□ -0.99
HERPUD1-218ENST00000569569 ABCA13Q86UQ4 5058 aa8.89□□□□□ -0.99
HERPUD1-218ENST00000569569 APOC3P02656 99 aa8.88□□□□□ -0.99
HERPUD1-218ENST00000569569 NDUFA5Q16718 116 aa8.88□□□□□ -0.99
HERPUD1-218ENST00000569569 ZNF561-AS1K7EIQ3 104 aa8.87□□□□□ -0.99
HERPUD1-218ENST00000569569 COX7A2LO14548 114 aa8.87□□□□□ -0.99
HERPUD1-218ENST00000569569 MALP21145 153 aa8.87□□□□□ -0.99
HERPUD1-218ENST00000569569 C2orf66Q6UXQ4 117 aa8.87□□□□□ -0.99
HERPUD1-218ENST00000569569 SVBPQ8N300 66 aa8.87□□□□□ -0.99
HERPUD1-218ENST00000569569 CYSLTR1Q9Y271 337 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms