RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 MT3P25713 68 aa5.46□□□□□ -1.54
CDH11-216ENST00000569128 ZNF56Q15929 161 aa5.46□□□□□ -1.54
CDH11-216ENST00000569128 RASL11AQ6T310 242 aa5.46□□□□□ -1.54
CDH11-216ENST00000569128 C2orf66Q6UXQ4 117 aa5.46□□□□□ -1.54
CDH11-216ENST00000569128 SMIM15Q7Z3B0 74 aa5.46□□□□□ -1.54
CDH11-216ENST00000569128 C6orf223Q8N319 242 aa5.46□□□□□ -1.54
CDH11-216ENST00000569128 FRZBQ92765 325 aa5.46□□□□□ -1.54
CDH11-216ENST00000569128 RPL39LQ96EH5 51 aaKnown RBP5.46□□□□□ -1.54
CDH11-216ENST00000569128 C18orf15Q96N68 181 aa5.46□□□□□ -1.54
CDH11-216ENST00000569128 TRAPPC1Q9Y5R8 145 aa5.46□□□□□ -1.54
CDH11-216ENST00000569128 V9GYY9 64 aa5.46□□□□□ -1.54
CDH11-216ENST00000569128 A0A0J9YY99 117 aa5.45□□□□□ -1.54
CDH11-216ENST00000569128 M0QY20 66 aa5.45□□□□□ -1.54
CDH11-216ENST00000569128 PHOX2AO14813 284 aa5.45□□□□□ -1.54
CDH11-216ENST00000569128 APCSP02743 223 aa5.45□□□□□ -1.54
CDH11-216ENST00000569128 TRGC2P03986 189 aa5.45□□□□□ -1.54
CDH11-216ENST00000569128 S100A8P05109 93 aa5.45□□□□□ -1.54
CDH11-216ENST00000569128 ATP5G1P05496 136 aa5.45□□□□□ -1.54
CDH11-216ENST00000569128 PRR4Q16378 134 aa5.45□□□□□ -1.54
CDH11-216ENST00000569128 ZFP2Q6ZN57 461 aa5.45□□□□□ -1.54
CDH11-216ENST00000569128 SLC25A29Q8N8R3 303 aa5.45□□□□□ -1.54
CDH11-216ENST00000569128 DEFB104AQ8WTQ1 72 aa5.45□□□□□ -1.54
CDH11-216ENST00000569128 DEFB131BA0A096LNP1 70 aa5.44□□□□□ -1.54
CDH11-216ENST00000569128 D6R8Y8 96 aa5.44□□□□□ -1.54
CDH11-216ENST00000569128 HLA-DQA1P01909 254 aa5.44□□□□□ -1.54
CDH11-216ENST00000569128 CRYBA4P53673 196 aa5.44□□□□□ -1.54
CDH11-216ENST00000569128 VSIG2Q96IQ7 327 aa5.44□□□□□ -1.54
CDH11-216ENST00000569128 OPRPNQ99935 248 aaPredicted RBP5.44□□□□□ -1.54
CDH11-216ENST00000569128 HHLA3Q9XRX5 114 aa5.44□□□□□ -1.54
CDH11-216ENST00000569128 NPYP01303 97 aa5.43□□□□□ -1.54
CDH11-216ENST00000569128 CKS2P33552 79 aa5.43□□□□□ -1.54
CDH11-216ENST00000569128 COX19Q49B96 90 aa5.43□□□□□ -1.54
CDH11-216ENST00000569128 PRELID3AQ96N28 172 aa5.43□□□□□ -1.54
CDH11-216ENST00000569128 KRTAP2-2Q9BYT5 123 aa5.43□□□□□ -1.54
CDH11-216ENST00000569128 A0A096LPF7 62 aa5.42□□□□□ -1.54
CDH11-216ENST00000569128 TRAV10A0A0B4J240 114 aa5.42□□□□□ -1.54
CDH11-216ENST00000569128 LOC389332A0A1B0GUA5 103 aa5.42□□□□□ -1.54
CDH11-216ENST00000569128 OXTP01178 125 aa5.42□□□□□ -1.54
CDH11-216ENST00000569128 MT-ND6P03923 174 aa5.42□□□□□ -1.54
CDH11-216ENST00000569128 SRIP30626 198 aa5.42□□□□□ -1.54
CDH11-216ENST00000569128 IQCJQ1A5X6 159 aa5.42□□□□□ -1.54
CDH11-216ENST00000569128 OR10J3Q5JRS4 329 aa5.42□□□□□ -1.54
CDH11-216ENST00000569128 NEGR1Q7Z3B1 354 aa5.42□□□□□ -1.54
CDH11-216ENST00000569128 ZNRF2Q8NHG8 242 aa5.42□□□□□ -1.54
CDH11-216ENST00000569128 MRAP2Q96G30 205 aa5.42□□□□□ -1.54
CDH11-216ENST00000569128 PRO0255Q9UI72 69 aa5.42□□□□□ -1.54
CDH11-216ENST00000569128 DYNC2H1Q8NCM8 4307 aaKnown RBP5.41□□□□□ -1.54
CDH11-216ENST00000569128 TRBV6-4A0A1B0GX49 114 aa5.41□□□□□ -1.54
CDH11-216ENST00000569128 ZFAND6Q6FIF0 208 aa5.41□□□□□ -1.54
CDH11-216ENST00000569128 ORMDL3Q8N138 153 aa5.41□□□□□ -1.54
CDH11-216ENST00000569128 NIT2Q9NQR4 276 aa5.41□□□□□ -1.54
CDH11-216ENST00000569128 DNAH7Q8WXX0 4024 aa5.41□□□□□ -1.54
CDH11-216ENST00000569128 IGLL5B9A064 214 aa5.4□□□□□ -1.54
CDH11-216ENST00000569128 PPBPP02775 128 aa5.4□□□□□ -1.54
CDH11-216ENST00000569128 RHOHQ15669 191 aa5.4□□□□□ -1.54
CDH11-216ENST00000569128 Q8N377 158 aa5.4□□□□□ -1.54
CDH11-216ENST00000569128 PRADC1Q9BSG0 188 aa5.4□□□□□ -1.54
CDH11-216ENST00000569128 STAB2Q8WWQ8 2551 aa5.4□□□□□ -1.55
CDH11-216ENST00000569128 IGLV2-18A0A075B6J9 118 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 TRBV10-1A0A0K0K1A3 114 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 TRBV6-5A0A0K0K1A5 114 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 A6NDN8 102 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 SDHAF1A6NFY7 115 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 H7C1H1 209 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 HIST1H2BKO60814 126 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 HIST1H2BJP06899 126 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 LINC00694P0DN24 101 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 HIST1H2BOP23527 126 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 HIST1H2BBP33778 126 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 IFI27P40305 119 aaPredicted RBP5.39□□□□□ -1.55
CDH11-216ENST00000569128 POLR2KP53803 58 aaKnown RBP5.39□□□□□ -1.55
CDH11-216ENST00000569128 HIST1H2BDP58876 126 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 UBE2D3P61077 147 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 HIST1H2BCP62807 126 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 UBE2D2P62837 147 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 CXCL6P80162 114 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 HIST2H2BEQ16778 126 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 C14orf177Q52M58 125 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.39□□□□□ -1.55
CDH11-216ENST00000569128 ZC2HC1BQ5TFG8 222 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 CEMP1Q6PRD7 247 aaPredicted RBP5.39□□□□□ -1.55
CDH11-216ENST00000569128 C18orf32Q8TCD1 76 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 HIST1H2BHQ93079 126 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 HIST1H2BNQ99877 126 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 HIST1H2BMQ99879 126 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 TMEM70Q9BUB7 260 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 ST20Q9HBF5 79 aa5.39□□□□□ -1.55
CDH11-216ENST00000569128 TRBV7-3A0A075B6L6 115 aa5.38□□□□□ -1.55
CDH11-216ENST00000569128 C1orf196B1AJZ1 125 aa5.38□□□□□ -1.55
CDH11-216ENST00000569128 TCAPO15273 167 aa5.38□□□□□ -1.55
CDH11-216ENST00000569128 NUPR1O60356 82 aa5.38□□□□□ -1.55
CDH11-216ENST00000569128 NTM-AS1Q6ZSK4 140 aa5.38□□□□□ -1.55
CDH11-216ENST00000569128 NKAPP1Q8N9T2 125 aa5.38□□□□□ -1.55
CDH11-216ENST00000569128 DNAJC30Q96LL9 226 aa5.38□□□□□ -1.55
CDH11-216ENST00000569128 MAP1LC3AQ9H492 121 aa5.38□□□□□ -1.55
CDH11-216ENST00000569128 TGP01266 2768 aa5.38□□□□□ -1.55
CDH11-216ENST00000569128 IGLV8-61A0A075B6I0 122 aa5.37□□□□□ -1.55
CDH11-216ENST00000569128 NIT1Q86X76 327 aa5.37□□□□□ -1.55
CDH11-216ENST00000569128 ATP6V0E2Q8NHE4 81 aa5.37□□□□□ -1.55
CDH11-216ENST00000569128 C20orf78Q9BR46 151 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms