RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 UBE2L6O14933 153 aa7.11□□□□□ -1.27
CDH3-210ENST00000569117 SIVA1O15304 175 aa7.11□□□□□ -1.27
CDH3-210ENST00000569117 DNAH10OSP0CZ25 163 aa7.11□□□□□ -1.27
CDH3-210ENST00000569117 G0S2P27469 103 aa7.11□□□□□ -1.27
CDH3-210ENST00000569117 MPV17L2Q567V2 206 aa7.11□□□□□ -1.27
CDH3-210ENST00000569117 LINC01556Q5JQF7 62 aa7.11□□□□□ -1.27
CDH3-210ENST00000569117 MRPL52Q86TS9 123 aaKnown RBP7.11□□□□□ -1.27
CDH3-210ENST00000569117 TMEM18Q96B42 140 aa7.11□□□□□ -1.27
CDH3-210ENST00000569117 CYSLTR1Q9Y271 337 aa7.11□□□□□ -1.27
CDH3-210ENST00000569117 LINC01549A6NIU2 74 aa7.1□□□□□ -1.27
CDH3-210ENST00000569117 HSBP1O75506 76 aa7.1□□□□□ -1.27
CDH3-210ENST00000569117 FGF6P10767 208 aa7.1□□□□□ -1.27
CDH3-210ENST00000569117 ZNF25P17030 456 aaPredicted RBP7.1□□□□□ -1.27
CDH3-210ENST00000569117 RPL39P62891 51 aaKnown RBP7.1□□□□□ -1.27
CDH3-210ENST00000569117 SMAGPQ0VAQ4 97 aa7.1□□□□□ -1.27
CDH3-210ENST00000569117 GAGE6Q13070 117 aa7.1□□□□□ -1.27
CDH3-210ENST00000569117 C2orf66Q6UXQ4 117 aa7.1□□□□□ -1.27
CDH3-210ENST00000569117 TIMM21Q9BVV7 248 aa7.1□□□□□ -1.27
CDH3-210ENST00000569117 SPANXA1Q9NS26 97 aa7.1□□□□□ -1.27
CDH3-210ENST00000569117 UBE2D4Q9Y2X8 147 aa7.1□□□□□ -1.27
CDH3-210ENST00000569117 A0A087WX48 190 aa7.09□□□□□ -1.27
CDH3-210ENST00000569117 A0A1B0GUV1 79 aa7.09□□□□□ -1.27
CDH3-210ENST00000569117 HBDP02042 147 aa7.09□□□□□ -1.27
CDH3-210ENST00000569117 AMMECR1LQ6DCA0 310 aa7.09□□□□□ -1.27
CDH3-210ENST00000569117 TOMM6Q96B49 74 aa7.09□□□□□ -1.27
CDH3-210ENST00000569117 CSDC2Q9Y534 153 aaKnown RBP7.09□□□□□ -1.27
CDH3-210ENST00000569117 VPS13DQ5THJ4 4388 aa7.09□□□□□ -1.27
CDH3-210ENST00000569117 DNAH1Q9P2D7 4330 aa7.08□□□□□ -1.28
CDH3-210ENST00000569117 TMEM262E9PQX1 116 aa7.08□□□□□ -1.28
CDH3-210ENST00000569117 K7EP13 123 aa7.08□□□□□ -1.28
CDH3-210ENST00000569117 RBX1P62877 108 aa7.08□□□□□ -1.28
CDH3-210ENST00000569117 PMCHL1Q16048 86 aa7.08□□□□□ -1.28
CDH3-210ENST00000569117 Q8N3U1 123 aa7.08□□□□□ -1.28
CDH3-210ENST00000569117 Q8N976 141 aa7.08□□□□□ -1.28
CDH3-210ENST00000569117 Q9H8V8 135 aa7.08□□□□□ -1.28
CDH3-210ENST00000569117 PYGO1Q9Y3Y4 419 aa7.08□□□□□ -1.28
CDH3-210ENST00000569117 NUPR1O60356 82 aa7.07□□□□□ -1.28
CDH3-210ENST00000569117 LY6G6CO95867 125 aa7.07□□□□□ -1.28
CDH3-210ENST00000569117 IGHV3-30P01768 117 aa7.07□□□□□ -1.28
CDH3-210ENST00000569117 IGHV3-33P01772 117 aa7.07□□□□□ -1.28
CDH3-210ENST00000569117 IGHV3-30-3P0DP02 117 aa7.07□□□□□ -1.28
CDH3-210ENST00000569117 IGHV3-30-5P0DP03 117 aa7.07□□□□□ -1.28
CDH3-210ENST00000569117 NDUFA6P56556 154 aa7.07□□□□□ -1.28
CDH3-210ENST00000569117 PDZD11Q5EBL8 140 aa7.07□□□□□ -1.28
CDH3-210ENST00000569117 C10orf126Q8N4M7 172 aa7.07□□□□□ -1.28
CDH3-210ENST00000569117 OR5A1Q8NGJ0 315 aa7.07□□□□□ -1.28
CDH3-210ENST00000569117 TMEM101Q96IK0 257 aa7.07□□□□□ -1.28
CDH3-210ENST00000569117 TIMM17AQ99595 171 aa7.07□□□□□ -1.28
CDH3-210ENST00000569117 IGLV4-60A0A075B6I1 120 aa7.06□□□□□ -1.28
CDH3-210ENST00000569117 LCE6AA0A183 80 aa7.06□□□□□ -1.28
CDH3-210ENST00000569117 IGIPA6NJ69 53 aa7.06□□□□□ -1.28
CDH3-210ENST00000569117 MRPS36P82909 103 aaKnown RBP7.06□□□□□ -1.28
CDH3-210ENST00000569117 TTC32Q5I0X7 151 aa7.06□□□□□ -1.28
CDH3-210ENST00000569117 Q6ZUT4 128 aa7.06□□□□□ -1.28
CDH3-210ENST00000569117 ERASQ7Z444 233 aa7.06□□□□□ -1.28
CDH3-210ENST00000569117 FAM19A2Q8N3H0 131 aa7.06□□□□□ -1.28
CDH3-210ENST00000569117 IGLV4-3A0A075B6K6 122 aa7.05□□□□□ -1.28
CDH3-210ENST00000569117 NBDYA0A0U1RRE5 68 aa7.05□□□□□ -1.28
CDH3-210ENST00000569117 ANGP03950 147 aaKnown RBP7.05□□□□□ -1.28
CDH3-210ENST00000569117 S100A6P06703 90 aa7.05□□□□□ -1.28
CDH3-210ENST00000569117 FAM104AQ969W3 186 aa7.05□□□□□ -1.28
CDH3-210ENST00000569117 TMEM141Q96I45 108 aa7.05□□□□□ -1.28
CDH3-210ENST00000569117 SCGB3A1Q96QR1 104 aa7.05□□□□□ -1.28
CDH3-210ENST00000569117 KRTAP1-5Q9BYS1 174 aa7.05□□□□□ -1.28
CDH3-210ENST00000569117 CDC42SE2Q9NRR3 84 aa7.05□□□□□ -1.28
CDH3-210ENST00000569117 TRAV9-2A0A087WT02 112 aa7.04□□□□□ -1.28
CDH3-210ENST00000569117 A0A0A0MQY5 61 aa7.04□□□□□ -1.28
CDH3-210ENST00000569117 ATP5LO75964 103 aa7.04□□□□□ -1.28
CDH3-210ENST00000569117 PAPPA-AS1Q5QFB9 102 aa7.04□□□□□ -1.28
CDH3-210ENST00000569117 Q6ZN92 141 aa7.04□□□□□ -1.28
CDH3-210ENST00000569117 ZNF664Q8N3J9 261 aa7.04□□□□□ -1.28
CDH3-210ENST00000569117 PACRGQ96M98 296 aaPredicted RBP7.04□□□□□ -1.28
CDH3-210ENST00000569117 PRR34Q9NV39 138 aa7.04□□□□□ -1.28
CDH3-210ENST00000569117 KLK12Q9UKR0 248 aa7.04□□□□□ -1.28
CDH3-210ENST00000569117 DNAH6Q9C0G6 4158 aa7.03□□□□□ -1.28
CDH3-210ENST00000569117 IBA57-AS1B1ANH7 110 aa7.03□□□□□ -1.28
CDH3-210ENST00000569117 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.03□□□□□ -1.28
CDH3-210ENST00000569117 LEPROTL1O95214 131 aa7.03□□□□□ -1.28
CDH3-210ENST00000569117 CRPP02741 224 aa7.03□□□□□ -1.28
CDH3-210ENST00000569117 PET117Q6UWS5 81 aa7.03□□□□□ -1.28
CDH3-210ENST00000569117 Q6ZR54 194 aa7.03□□□□□ -1.28
CDH3-210ENST00000569117 HIST3H2BBQ8N257 126 aa7.03□□□□□ -1.28
CDH3-210ENST00000569117 LINC00269Q8N2A0 174 aa7.03□□□□□ -1.28
CDH3-210ENST00000569117 OPRPNQ99935 248 aaPredicted RBP7.03□□□□□ -1.28
CDH3-210ENST00000569117 REG3AQ06141 175 aa7.02□□□□□ -1.29
CDH3-210ENST00000569117 RNASE13Q5GAN3 156 aaKnown RBP7.02□□□□□ -1.29
CDH3-210ENST00000569117 CLPSL2Q6UWE3 100 aa7.02□□□□□ -1.29
CDH3-210ENST00000569117 TEX43Q6ZNM6 134 aa7.02□□□□□ -1.29
CDH3-210ENST00000569117 LINC00173Q6ZV60 143 aa7.02□□□□□ -1.29
CDH3-210ENST00000569117 BAALCQ8WXS3 180 aa7.02□□□□□ -1.29
CDH3-210ENST00000569117 AMELXQ99217 191 aa7.02□□□□□ -1.29
CDH3-210ENST00000569117 HSPB8Q9UJY1 196 aa7.02□□□□□ -1.29
CDH3-210ENST00000569117 C5orf52A6NGY3 159 aa7.01□□□□□ -1.29
CDH3-210ENST00000569117 IFITM10A6NMD0 228 aa7.01□□□□□ -1.29
CDH3-210ENST00000569117 MIAQ16674 131 aa7.01□□□□□ -1.29
CDH3-210ENST00000569117 ENHOQ6UWT2 76 aa7.01□□□□□ -1.29
CDH3-210ENST00000569117 UBE2WQ96B02 151 aa7.01□□□□□ -1.29
CDH3-210ENST00000569117 IFI27L1Q96BM0 104 aa7.01□□□□□ -1.29
CDH3-210ENST00000569117 C2orf88Q9BSF0 95 aa7.01□□□□□ -1.29
CDH3-210ENST00000569117 KMT2AQ03164 3969 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms