RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 OSTCQ9NRP0 149 aa3.1□□□□□ -1.91
CLK3-219ENST00000567805 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.09□□□□□ -1.91
CLK3-219ENST00000567805 A0A1B0GVG6 124 aa3.09□□□□□ -1.91
CLK3-219ENST00000567805 hDV102S1A0JD36 115 aa3.09□□□□□ -1.91
CLK3-219ENST00000567805 ZNF25P17030 456 aaPredicted RBP3.09□□□□□ -1.91
CLK3-219ENST00000567805 TMEM241Q24JQ0 296 aa3.09□□□□□ -1.91
CLK3-219ENST00000567805 AMMECR1LQ6DCA0 310 aa3.09□□□□□ -1.91
CLK3-219ENST00000567805 ISOC2Q96AB3 205 aa3.09□□□□□ -1.91
CLK3-219ENST00000567805 MRAP2Q96G30 205 aa3.09□□□□□ -1.91
CLK3-219ENST00000567805 SMDT1Q9H4I9 107 aa3.09□□□□□ -1.91
CLK3-219ENST00000567805 ST20Q9HBF5 79 aa3.09□□□□□ -1.91
CLK3-219ENST00000567805 FAT3Q8TDW7 4589 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.08□□□□□ -1.92
CLK3-219ENST00000567805 IGKV3OR2-268A0A0C4DH90 116 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 TRBV27A0A0K0K1C4 114 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 IGKV2-29A2NJV5 120 aaPredicted RBP3.08□□□□□ -1.92
CLK3-219ENST00000567805 PPP1R17O96001 155 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 TSHBP01222 138 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 FGF6P10767 208 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 ESDP10768 282 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 RAB4AP20338 218 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 PMCHP20382 165 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 PTTG1IPP53801 180 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 RPL23P62829 140 aaKnown RBP3.08□□□□□ -1.92
CLK3-219ENST00000567805 RIGQ13278 110 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 PEA15Q15121 130 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 ADIRFQ15847 76 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 RNASEKQ6P5S7 137 aaKnown RBP3.08□□□□□ -1.92
CLK3-219ENST00000567805 CFAP161Q6P656 301 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 SDIM1Q6ZPB5 146 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 NUP35Q8NFH5 326 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 RNF185Q96GF1 192 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 TMEM101Q96IK0 257 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 BTF3L4Q96K17 158 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 NAT8Q9UHE5 227 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 NAT8BQ9UHF3 227 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 V9GYV3 84 aa3.08□□□□□ -1.92
CLK3-219ENST00000567805 IGHV3-64A0A075B6Q5 118 aa3.07□□□□□ -1.92
CLK3-219ENST00000567805 A0A1B0GW15 77 aa3.07□□□□□ -1.92
CLK3-219ENST00000567805 C7orf77A4D0Y5 90 aa3.07□□□□□ -1.92
CLK3-219ENST00000567805 GAGE12HA6NDE8 117 aa3.07□□□□□ -1.92
CLK3-219ENST00000567805 KRTAP29-1A8MX34 341 aaPredicted RBP3.07□□□□□ -1.92
CLK3-219ENST00000567805 C9JQL5 133 aa3.07□□□□□ -1.92
CLK3-219ENST00000567805 VCYO14598 125 aa3.07□□□□□ -1.92
CLK3-219ENST00000567805 PPP1R2P9O14990 202 aa3.07□□□□□ -1.92
CLK3-219ENST00000567805 GAS8-AS1O95177 125 aa3.07□□□□□ -1.92
CLK3-219ENST00000567805 SLPIP03973 132 aa3.07□□□□□ -1.92
CLK3-219ENST00000567805 RPS10P46783 165 aaKnown RBP3.07□□□□□ -1.92
CLK3-219ENST00000567805 POLR2KP53803 58 aaKnown RBP3.07□□□□□ -1.92
CLK3-219ENST00000567805 KRTAP10-4P60372 401 aaPredicted RBP3.07□□□□□ -1.92
CLK3-219ENST00000567805 CIRBPQ14011 172 aaKnown RBP3.07□□□□□ -1.92
CLK3-219ENST00000567805 RNF151Q2KHN1 245 aa3.07□□□□□ -1.92
CLK3-219ENST00000567805 MRPL52Q86TS9 123 aaKnown RBP3.07□□□□□ -1.92
CLK3-219ENST00000567805 AMN1Q8IY45 258 aa3.07□□□□□ -1.92
CLK3-219ENST00000567805 C15orf56Q8N910 161 aa3.07□□□□□ -1.92
CLK3-219ENST00000567805 OR5A1Q8NGJ0 315 aa3.07□□□□□ -1.92
CLK3-219ENST00000567805 CHCHD10Q8WYQ3 142 aaPredicted RBP3.07□□□□□ -1.92
CLK3-219ENST00000567805 TMEM242Q9NWH2 141 aa3.07□□□□□ -1.92
CLK3-219ENST00000567805 LRP1Q07954 4544 aaKnown RBP3.07□□□□□ -1.92
CLK3-219ENST00000567805 FLG2Q5D862 2391 aaPredicted RBP3.07□□□□□ -1.92
CLK3-219ENST00000567805 DMBT1Q9UGM3 2413 aaPredicted RBP3.07□□□□□ -1.92
CLK3-219ENST00000567805 GVQW2A0A096LPI5 108 aaPredicted RBP3.06□□□□□ -1.92
CLK3-219ENST00000567805 LINC00959A0A1B0GUT2 108 aa3.06□□□□□ -1.92
CLK3-219ENST00000567805 SMIM27A0A1W2PRY6 76 aa3.06□□□□□ -1.92
CLK3-219ENST00000567805 PANO1I0J062 215 aa3.06□□□□□ -1.92
CLK3-219ENST00000567805 FCER1GP30273 86 aa3.06□□□□□ -1.92
CLK3-219ENST00000567805 RPL37AP61513 92 aaKnown RBP3.06□□□□□ -1.92
CLK3-219ENST00000567805 SUMO2P61956 95 aaKnown RBP3.06□□□□□ -1.92
CLK3-219ENST00000567805 SMAGPQ0VAQ4 97 aa3.06□□□□□ -1.92
CLK3-219ENST00000567805 FOXI1Q12951 378 aa3.06□□□□□ -1.92
CLK3-219ENST00000567805 MRPL51Q4U2R6 128 aaKnown RBP3.06□□□□□ -1.92
CLK3-219ENST00000567805 ZNF664Q8N3J9 261 aa3.06□□□□□ -1.92
CLK3-219ENST00000567805 NRACQ8N912 160 aa3.06□□□□□ -1.92
CLK3-219ENST00000567805 KIR2DL4Q99706 377 aa3.06□□□□□ -1.92
CLK3-219ENST00000567805 CDC42SE2Q9NRR3 84 aa3.06□□□□□ -1.92
CLK3-219ENST00000567805 CSDC2Q9Y534 153 aaKnown RBP3.06□□□□□ -1.92
CLK3-219ENST00000567805 TRBV24-1A0A075B6N3 115 aa3.05□□□□□ -1.92
CLK3-219ENST00000567805 IGHV1-58A0A0C4DH39 117 aa3.05□□□□□ -1.92
CLK3-219ENST00000567805 LINC00862A6NCI5 91 aa3.05□□□□□ -1.92
CLK3-219ENST00000567805 F8W036 122 aa3.05□□□□□ -1.92
CLK3-219ENST00000567805 SMKR1H3BMG3 65 aa3.05□□□□□ -1.92
CLK3-219ENST00000567805 TCAPO15273 167 aa3.05□□□□□ -1.92
CLK3-219ENST00000567805 CCL25O15444 150 aa3.05□□□□□ -1.92
CLK3-219ENST00000567805 OXTP01178 125 aa3.05□□□□□ -1.92
CLK3-219ENST00000567805 S100A8P05109 93 aa3.05□□□□□ -1.92
CLK3-219ENST00000567805 XCL1P47992 114 aa3.05□□□□□ -1.92
CLK3-219ENST00000567805 CAMPP49913 170 aa3.05□□□□□ -1.92
CLK3-219ENST00000567805 RPL32P62910 135 aaKnown RBP3.05□□□□□ -1.92
CLK3-219ENST00000567805 SS18Q15532 418 aa3.05□□□□□ -1.92
CLK3-219ENST00000567805 HIGD2BQ4VC39 106 aa3.05□□□□□ -1.92
CLK3-219ENST00000567805 FAM104BQ5XKR9 115 aa3.05□□□□□ -1.92
CLK3-219ENST00000567805 CD164L2Q6UWJ8 174 aa3.05□□□□□ -1.92
CLK3-219ENST00000567805 SPACA4Q8TDM5 124 aa3.05□□□□□ -1.92
CLK3-219ENST00000567805 C20orf78Q9BR46 151 aa3.05□□□□□ -1.92
CLK3-219ENST00000567805 PKIGQ9Y2B9 76 aa3.05□□□□□ -1.92
CLK3-219ENST00000567805 A0A087WYN8 130 aa3.04□□□□□ -1.92
CLK3-219ENST00000567805 A0A1B0GXF2 115 aa3.04□□□□□ -1.92
CLK3-219ENST00000567805 C1orf196B1AJZ1 125 aa3.04□□□□□ -1.92
CLK3-219ENST00000567805 CHTF8P0CG12 524 aa3.04□□□□□ -1.92
CLK3-219ENST00000567805 CKS2P33552 79 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms