RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 SMIM7Q9BQ49 75 aa17.46■□□□□ 0.39
UBFD1-206ENST00000566669 TRBV27A0A0K0K1C4 114 aa17.45■□□□□ 0.38
UBFD1-206ENST00000566669 HIGD1CA8MV81 97 aa17.45■□□□□ 0.38
UBFD1-206ENST00000566669 XCL1P47992 114 aa17.45■□□□□ 0.38
UBFD1-206ENST00000566669 CEBPGP53567 150 aa17.45■□□□□ 0.38
UBFD1-206ENST00000566669 IGKV2-24A0A0C4DH68 120 aa17.44■□□□□ 0.38
UBFD1-206ENST00000566669 CCL25O15444 150 aa17.44■□□□□ 0.38
UBFD1-206ENST00000566669 TSHBP01222 138 aa17.44■□□□□ 0.38
UBFD1-206ENST00000566669 STPG4Q8N801 248 aa17.44■□□□□ 0.38
UBFD1-206ENST00000566669 EIF5A2Q9GZV4 153 aaKnown RBP17.44■□□□□ 0.38
UBFD1-206ENST00000566669 OSTCQ9NRP0 149 aa17.44■□□□□ 0.38
UBFD1-206ENST00000566669 POLR2KP53803 58 aaKnown RBP17.43■□□□□ 0.38
UBFD1-206ENST00000566669 CD164L2Q6UWJ8 174 aa17.43■□□□□ 0.38
UBFD1-206ENST00000566669 LINC01551Q86U37 167 aa17.43■□□□□ 0.38
UBFD1-206ENST00000566669 C7orf77A4D0Y5 90 aa17.42■□□□□ 0.38
UBFD1-206ENST00000566669 CDC42SE2Q9NRR3 84 aa17.42■□□□□ 0.38
UBFD1-206ENST00000566669 TMEM242Q9NWH2 141 aa17.42■□□□□ 0.38
UBFD1-206ENST00000566669 CARD19Q96LW7 228 aa17.41■□□□□ 0.38
UBFD1-206ENST00000566669 ZNF561-AS1K7EIQ3 104 aa17.4■□□□□ 0.38
UBFD1-206ENST00000566669 VCYO14598 125 aa17.4■□□□□ 0.38
UBFD1-206ENST00000566669 RAB4AP20338 218 aa17.4■□□□□ 0.38
UBFD1-206ENST00000566669 ZNF664Q8N3J9 261 aa17.4■□□□□ 0.38
UBFD1-206ENST00000566669 CSDC2Q9Y534 153 aaKnown RBP17.4■□□□□ 0.38
UBFD1-206ENST00000566669 ZNF727A8MUV8 499 aa17.39■□□□□ 0.37
UBFD1-206ENST00000566669 PRR3P79522 188 aaKnown RBP17.39■□□□□ 0.37
UBFD1-206ENST00000566669 RIGQ13278 110 aa17.39■□□□□ 0.37
UBFD1-206ENST00000566669 ISOC2Q96AB3 205 aa17.39■□□□□ 0.37
UBFD1-206ENST00000566669 A0A096LNI7 61 aa17.38■□□□□ 0.37
UBFD1-206ENST00000566669 C1orf196B1AJZ1 125 aa17.37■□□□□ 0.37
UBFD1-206ENST00000566669 FCER1GP30273 86 aa17.37■□□□□ 0.37
UBFD1-206ENST00000566669 SYCNQ0VAF6 134 aa17.36■□□□□ 0.37
UBFD1-206ENST00000566669 KIR2DL4Q99706 377 aa17.36■□□□□ 0.37
UBFD1-206ENST00000566669 PPP1R2P9O14990 202 aa17.35■□□□□ 0.37
UBFD1-206ENST00000566669 AMN1Q8IY45 258 aa17.35■□□□□ 0.37
UBFD1-206ENST00000566669 GAS8-AS1O95177 125 aa17.34■□□□□ 0.37
UBFD1-206ENST00000566669 FAM74A3Q4VXF1 159 aa17.34■□□□□ 0.37
UBFD1-206ENST00000566669 LINC01600Q96MT4 127 aa17.34■□□□□ 0.37
UBFD1-206ENST00000566669 TMEM18Q96B42 140 aa17.33■□□□□ 0.36
UBFD1-206ENST00000566669 TCAPO15273 167 aa17.32■□□□□ 0.36
UBFD1-206ENST00000566669 MALP21145 153 aa17.32■□□□□ 0.36
UBFD1-206ENST00000566669 CAMPP49913 170 aa17.32■□□□□ 0.36
UBFD1-206ENST00000566669 SUMO2P61956 95 aaKnown RBP17.32■□□□□ 0.36
UBFD1-206ENST00000566669 SPINK6Q6UWN8 80 aa17.32■□□□□ 0.36
UBFD1-206ENST00000566669 NAT8BQ9UHF3 227 aa17.32■□□□□ 0.36
UBFD1-206ENST00000566669 COX7A2LO14548 114 aa17.31■□□□□ 0.36
UBFD1-206ENST00000566669 V9GYV3 84 aa17.31■□□□□ 0.36
UBFD1-206ENST00000566669 UBR4Q5T4S7 5183 aa17.3■□□□□ 0.36
UBFD1-206ENST00000566669 SRP19P09132 144 aaKnown RBP17.3■□□□□ 0.36
UBFD1-206ENST00000566669 REG3GQ6UW15 175 aa17.3■□□□□ 0.36
UBFD1-206ENST00000566669 NUP35Q8NFH5 326 aa17.3■□□□□ 0.36
UBFD1-206ENST00000566669 LOC107984640A0A0U1RRK4 108 aa17.29■□□□□ 0.36
UBFD1-206ENST00000566669 TMEM241Q24JQ0 296 aa17.29■□□□□ 0.36
UBFD1-206ENST00000566669 Q6ZRP5 223 aa17.29■□□□□ 0.36
UBFD1-206ENST00000566669 TIMM21Q9BVV7 248 aa17.29■□□□□ 0.36
UBFD1-206ENST00000566669 A0A1B0GW15 77 aa17.28■□□□□ 0.36
UBFD1-206ENST00000566669 LINC00862A6NCI5 91 aa17.28■□□□□ 0.36
UBFD1-206ENST00000566669 UBE2D4Q9Y2X8 147 aa17.28■□□□□ 0.36
UBFD1-206ENST00000566669 IGLV4-69A0A075B6H9 119 aa17.27■□□□□ 0.36
UBFD1-206ENST00000566669 APOMO95445 188 aa17.27■□□□□ 0.36
UBFD1-206ENST00000566669 PTTG1IPP53801 180 aa17.27■□□□□ 0.36
UBFD1-206ENST00000566669 NRACQ8N912 160 aa17.27■□□□□ 0.36
UBFD1-206ENST00000566669 LINC00526Q96FQ7 95 aa17.27■□□□□ 0.36
UBFD1-206ENST00000566669 C20orf78Q9BR46 151 aa17.27■□□□□ 0.36
UBFD1-206ENST00000566669 C2orf48Q96LS8 159 aa17.26■□□□□ 0.35
UBFD1-206ENST00000566669 RPL32P62910 135 aaKnown RBP17.25■□□□□ 0.35
UBFD1-206ENST00000566669 FAM104BQ5XKR9 115 aa17.24■□□□□ 0.35
UBFD1-206ENST00000566669 A0A0J9YXV3 536 aa17.23■□□□□ 0.35
UBFD1-206ENST00000566669 SMKR1H3BMG3 65 aa17.23■□□□□ 0.35
UBFD1-206ENST00000566669 CAMK2N2Q96S95 79 aa17.23■□□□□ 0.35
UBFD1-206ENST00000566669 hCG_2014768A0A024R1R8 64 aa17.22■□□□□ 0.35
UBFD1-206ENST00000566669 TRBV24-1A0A075B6N3 115 aa17.22■□□□□ 0.35
UBFD1-206ENST00000566669 S100A8P05109 93 aa17.22■□□□□ 0.35
UBFD1-206ENST00000566669 TRAV13-1A0A0B4J241 112 aa17.21■□□□□ 0.35
UBFD1-206ENST00000566669 F8WDY8 70 aa17.21■□□□□ 0.35
UBFD1-206ENST00000566669 RPL23P62829 140 aaKnown RBP17.21■□□□□ 0.35
UBFD1-206ENST00000566669 NAT8Q9UHE5 227 aa17.21■□□□□ 0.35
UBFD1-206ENST00000566669 SMIM27A0A1W2PRY6 76 aa17.2■□□□□ 0.34
UBFD1-206ENST00000566669 MRPL51Q4U2R6 128 aaKnown RBP17.2■□□□□ 0.34
UBFD1-206ENST00000566669 CKS2P33552 79 aa17.19■□□□□ 0.34
UBFD1-206ENST00000566669 GAGE2BQ13066 116 aa17.19■□□□□ 0.34
UBFD1-206ENST00000566669 SRSF9Q13242 221 aaKnown RBP eCLIP17.19■□□□□ 0.34
UBFD1-206ENST00000566669 RNF151Q2KHN1 245 aa17.19■□□□□ 0.34
UBFD1-206ENST00000566669 OR10D4PQ8NGN7 298 aa17.19■□□□□ 0.34
UBFD1-206ENST00000566669 SMDT1Q9H4I9 107 aa17.19■□□□□ 0.34
UBFD1-206ENST00000566669 ADIRFQ15847 76 aa17.18■□□□□ 0.34
UBFD1-206ENST00000566669 F8W036 122 aa17.17■□□□□ 0.34
UBFD1-206ENST00000566669 SPANXA1Q9NS26 97 aa17.16■□□□□ 0.34
UBFD1-206ENST00000566669 PEA15Q15121 130 aa17.15■□□□□ 0.34
UBFD1-206ENST00000566669 Q6ZUT4 128 aa17.15■□□□□ 0.34
UBFD1-206ENST00000566669 PPBPP02775 128 aa17.14■□□□□ 0.33
UBFD1-206ENST00000566669 SPAG11BQ08648 103 aa17.14■□□□□ 0.33
UBFD1-206ENST00000566669 RNASE13Q5GAN3 156 aaKnown RBP17.14■□□□□ 0.33
UBFD1-206ENST00000566669 C5orf38Q86SI9 138 aa17.14■□□□□ 0.33
UBFD1-206ENST00000566669 TNFRSF6BO95407 300 aa17.13■□□□□ 0.33
UBFD1-206ENST00000566669 KRTAP10-8P60410 259 aa17.13■□□□□ 0.33
UBFD1-206ENST00000566669 SMIM2Q9BVW6 85 aa17.13■□□□□ 0.33
UBFD1-206ENST00000566669 HBBP68871 147 aa17.12■□□□□ 0.33
UBFD1-206ENST00000566669 MRPS36P82909 103 aaKnown RBP17.12■□□□□ 0.33
UBFD1-206ENST00000566669 TNXBP22105 4242 aa17.11■□□□□ 0.33
UBFD1-206ENST00000566669 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms