RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 D6R8Y8 96 aa12.52□□□□□ -0.41
CCDC113-204ENST00000566498 INAFM2P0DMQ5 153 aa12.52□□□□□ -0.41
CCDC113-204ENST00000566498 IFITM2Q01629 132 aa12.52□□□□□ -0.41
CCDC113-204ENST00000566498 ATP5L2Q7Z4Y8 100 aa12.52□□□□□ -0.41
CCDC113-204ENST00000566498 ZNF664Q8N3J9 261 aa12.52□□□□□ -0.41
CCDC113-204ENST00000566498 C9orf163Q8N9P6 203 aa12.52□□□□□ -0.41
CCDC113-204ENST00000566498 CHAC1Q9BUX1 264 aa12.52□□□□□ -0.41
CCDC113-204ENST00000566498 SMAGPQ0VAQ4 97 aa12.51□□□□□ -0.41
CCDC113-204ENST00000566498 MRPL52Q86TS9 123 aaKnown RBP12.51□□□□□ -0.41
CCDC113-204ENST00000566498 CDC42SE2Q9NRR3 84 aa12.51□□□□□ -0.41
CCDC113-204ENST00000566498 LINC00959A0A1B0GUT2 108 aa12.5□□□□□ -0.41
CCDC113-204ENST00000566498 PPBPP02775 128 aa12.5□□□□□ -0.41
CCDC113-204ENST00000566498 XCL1P47992 114 aa12.5□□□□□ -0.41
CCDC113-204ENST00000566498 SS18Q15532 418 aa12.5□□□□□ -0.41
CCDC113-204ENST00000566498 SCXQ7RTU7 201 aa12.5□□□□□ -0.41
CCDC113-204ENST00000566498 TMEM18Q96B42 140 aa12.5□□□□□ -0.41
CCDC113-204ENST00000566498 ABCA13Q86UQ4 5058 aa12.49□□□□□ -0.41
CCDC113-204ENST00000566498 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.49□□□□□ -0.41
CCDC113-204ENST00000566498 TCAPO15273 167 aa12.48□□□□□ -0.41
CCDC113-204ENST00000566498 CCL25O15444 150 aa12.48□□□□□ -0.41
CCDC113-204ENST00000566498 NPYP01303 97 aa12.48□□□□□ -0.41
CCDC113-204ENST00000566498 UQCC3Q6UW78 93 aa12.48□□□□□ -0.41
CCDC113-204ENST00000566498 TMEM136Q6ZRR5 245 aa12.48□□□□□ -0.41
CCDC113-204ENST00000566498 ORMDL3Q8N138 153 aa12.48□□□□□ -0.41
CCDC113-204ENST00000566498 CIRBP-AS1Q8TBR5 109 aa12.48□□□□□ -0.41
CCDC113-204ENST00000566498 FAT1Q14517 4588 aa12.47□□□□□ -0.41
CCDC113-204ENST00000566498 CNBPP62633 177 aaKnown RBP12.47□□□□□ -0.41
CCDC113-204ENST00000566498 RPL32P62910 135 aaKnown RBP12.47□□□□□ -0.41
CCDC113-204ENST00000566498 LINC00528Q8N1L1 170 aa12.47□□□□□ -0.41
CCDC113-204ENST00000566498 TMEM218A2RU14 115 aa12.46□□□□□ -0.41
CCDC113-204ENST00000566498 PHOX2AO14813 284 aa12.46□□□□□ -0.41
CCDC113-204ENST00000566498 SLPIP03973 132 aa12.46□□□□□ -0.41
CCDC113-204ENST00000566498 FOXI1Q12951 378 aa12.46□□□□□ -0.41
CCDC113-204ENST00000566498 HIGD2BQ4VC39 106 aa12.46□□□□□ -0.41
CCDC113-204ENST00000566498 C15orf56Q8N910 161 aa12.46□□□□□ -0.41
CCDC113-204ENST00000566498 DPH3Q96FX2 82 aa12.46□□□□□ -0.41
CCDC113-204ENST00000566498 PRELID3AQ96N28 172 aa12.46□□□□□ -0.41
CCDC113-204ENST00000566498 SMIM2Q9BVW6 85 aa12.46□□□□□ -0.41
CCDC113-204ENST00000566498 UBE2D4Q9Y2X8 147 aa12.46□□□□□ -0.41
CCDC113-204ENST00000566498 CSDC2Q9Y534 153 aaKnown RBP12.46□□□□□ -0.41
CCDC113-204ENST00000566498 DNAH8Q96JB1 4490 aa12.45□□□□□ -0.42
CCDC113-204ENST00000566498 PLA2G1BP04054 148 aaKnown RBP12.45□□□□□ -0.42
CCDC113-204ENST00000566498 SDIM1Q6ZPB5 146 aa12.45□□□□□ -0.42
CCDC113-204ENST00000566498 IGHV3-64A0A075B6Q5 118 aa12.44□□□□□ -0.42
CCDC113-204ENST00000566498 RAB5AP20339 215 aa12.44□□□□□ -0.42
CCDC113-204ENST00000566498 RNASE13Q5GAN3 156 aaKnown RBP12.44□□□□□ -0.42
CCDC113-204ENST00000566498 C1orf196B1AJZ1 125 aa12.43□□□□□ -0.42
CCDC113-204ENST00000566498 RPL39P62891 51 aaKnown RBP12.43□□□□□ -0.42
CCDC113-204ENST00000566498 CD164L2Q6UWJ8 174 aa12.43□□□□□ -0.42
CCDC113-204ENST00000566498 TIMM21Q9BVV7 248 aa12.43□□□□□ -0.42
CCDC113-204ENST00000566498 SRRM2Q9UQ35 2752 aaKnown RBP12.43□□□□□ -0.42
CCDC113-204ENST00000566498 TRAV13-1A0A0B4J241 112 aa12.42□□□□□ -0.42
CCDC113-204ENST00000566498 LOC389332A0A1B0GUA5 103 aa12.42□□□□□ -0.42
CCDC113-204ENST00000566498 ADCYAP1P18509 176 aa12.41□□□□□ -0.42
CCDC113-204ENST00000566498 COMMD7Q86VX2 200 aa12.41□□□□□ -0.42
CCDC113-204ENST00000566498 IMMP2LQ96T52 175 aa12.41□□□□□ -0.42
CCDC113-204ENST00000566498 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.41□□□□□ -0.42
CCDC113-204ENST00000566498 GVQW2A0A096LPI5 108 aaPredicted RBP12.4□□□□□ -0.42
CCDC113-204ENST00000566498 IGHV1-58A0A0C4DH39 117 aa12.4□□□□□ -0.42
CCDC113-204ENST00000566498 Q6ZUT4 128 aa12.4□□□□□ -0.42
CCDC113-204ENST00000566498 CTDSP1Q9GZU7 261 aa12.4□□□□□ -0.42
CCDC113-204ENST00000566498 MALP21145 153 aa12.39□□□□□ -0.43
CCDC113-204ENST00000566498 SEC11CQ9BY50 192 aa12.39□□□□□ -0.43
CCDC113-204ENST00000566498 MAP1LC3AQ9H492 121 aa12.39□□□□□ -0.43
CCDC113-204ENST00000566498 LAMTOR2Q9Y2Q5 125 aa12.39□□□□□ -0.43
CCDC113-204ENST00000566498 PANO1I0J062 215 aa12.38□□□□□ -0.43
CCDC113-204ENST00000566498 ZNF561-AS1K7EIQ3 104 aa12.38□□□□□ -0.43
CCDC113-204ENST00000566498 LINC00526Q96FQ7 95 aa12.38□□□□□ -0.43
CCDC113-204ENST00000566498 SPANXA1Q9NS26 97 aa12.38□□□□□ -0.43
CCDC113-204ENST00000566498 COX7A2LO14548 114 aa12.37□□□□□ -0.43
CCDC113-204ENST00000566498 COX6A2Q02221 97 aa12.37□□□□□ -0.43
CCDC113-204ENST00000566498 OPRPNQ99935 248 aaPredicted RBP12.37□□□□□ -0.43
CCDC113-204ENST00000566498 PRSS47A8MTI9 375 aa12.36□□□□□ -0.43
CCDC113-204ENST00000566498 CHTF8P0CG12 524 aa12.35□□□□□ -0.43
CCDC113-204ENST00000566498 S100PP25815 95 aa12.35□□□□□ -0.43
CCDC113-204ENST00000566498 C5orf38Q86SI9 138 aa12.35□□□□□ -0.43
CCDC113-204ENST00000566498 IFI27P40305 119 aaPredicted RBP12.34□□□□□ -0.43
CCDC113-204ENST00000566498 MRPS36P82909 103 aaKnown RBP12.34□□□□□ -0.43
CCDC113-204ENST00000566498 Q8N8P6 123 aa12.34□□□□□ -0.43
CCDC113-204ENST00000566498 PRSS3P2Q8NHM4 247 aa12.34□□□□□ -0.43
CCDC113-204ENST00000566498 TRAV9-1A0A075B6T8 112 aa12.32□□□□□ -0.44
CCDC113-204ENST00000566498 IFITM10A6NMD0 228 aa12.32□□□□□ -0.44
CCDC113-204ENST00000566498 KIAA1644Q3SXP7 199 aa12.32□□□□□ -0.44
CCDC113-204ENST00000566498 FAM104AQ969W3 186 aa12.32□□□□□ -0.44
CCDC113-204ENST00000566498 A0A087WYN8 130 aa12.31□□□□□ -0.44
CCDC113-204ENST00000566498 IGKV2-24A0A0C4DH68 120 aa12.31□□□□□ -0.44
CCDC113-204ENST00000566498 APOMO95445 188 aa12.31□□□□□ -0.44
CCDC113-204ENST00000566498 SYCNQ0VAF6 134 aa12.31□□□□□ -0.44
CCDC113-204ENST00000566498 CIRBPQ14011 172 aaKnown RBP12.31□□□□□ -0.44
CCDC113-204ENST00000566498 CARD19Q96LW7 228 aa12.31□□□□□ -0.44
CCDC113-204ENST00000566498 IGLV4-69A0A075B6H9 119 aa12.3□□□□□ -0.44
CCDC113-204ENST00000566498 RPL37AP61513 92 aaKnown RBP12.3□□□□□ -0.44
CCDC113-204ENST00000566498 MAJINQ3KP22 176 aa12.3□□□□□ -0.44
CCDC113-204ENST00000566498 SPACA4Q8TDM5 124 aa12.3□□□□□ -0.44
CCDC113-204ENST00000566498 RPS10P5Q9NQ39 176 aa12.3□□□□□ -0.44
CCDC113-204ENST00000566498 PYGO1Q9Y3Y4 419 aa12.3□□□□□ -0.44
CCDC113-204ENST00000566498 VPS13BQ7Z7G8 4022 aa12.3□□□□□ -0.44
CCDC113-204ENST00000566498 ORMDL2Q53FV1 153 aa12.29□□□□□ -0.44
CCDC113-204ENST00000566498 C10orf91Q5T1B1 145 aa12.29□□□□□ -0.44
CCDC113-204ENST00000566498 NXT2Q9NPJ8 142 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms