RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 BLOC1S1P78537 153 aa7.56□□□□□ -1.2
UBR1-206ENST00000566493 FAM231DQ6ZW35 169 aa7.56□□□□□ -1.2
UBR1-206ENST00000566493 GVQW2A0A096LPI5 108 aaPredicted RBP7.55□□□□□ -1.2
UBR1-206ENST00000566493 PHOX2AO14813 284 aa7.55□□□□□ -1.2
UBR1-206ENST00000566493 CEBPGP53567 150 aa7.55□□□□□ -1.2
UBR1-206ENST00000566493 OR5A1Q8NGJ0 315 aa7.55□□□□□ -1.2
UBR1-206ENST00000566493 PRSS3P2Q8NHM4 247 aa7.55□□□□□ -1.2
UBR1-206ENST00000566493 KRTAP9-9Q9BYP9 154 aa7.55□□□□□ -1.2
UBR1-206ENST00000566493 KRTAP9-4Q9BYQ2 154 aa7.55□□□□□ -1.2
UBR1-206ENST00000566493 ST20Q9HBF5 79 aa7.55□□□□□ -1.2
UBR1-206ENST00000566493 PKIGQ9Y2B9 76 aa7.55□□□□□ -1.2
UBR1-206ENST00000566493 TRBV6-5A0A0K0K1A5 114 aa7.54□□□□□ -1.2
UBR1-206ENST00000566493 XCL1P47992 114 aa7.54□□□□□ -1.2
UBR1-206ENST00000566493 FOXI1Q12951 378 aa7.54□□□□□ -1.2
UBR1-206ENST00000566493 ANKRD39Q53RE8 183 aa7.54□□□□□ -1.2
UBR1-206ENST00000566493 CT83Q5H943 113 aa7.54□□□□□ -1.2
UBR1-206ENST00000566493 STPG4Q8N801 248 aa7.54□□□□□ -1.2
UBR1-206ENST00000566493 IGHV1-58A0A0C4DH39 117 aa7.53□□□□□ -1.2
UBR1-206ENST00000566493 CCL25O15444 150 aa7.53□□□□□ -1.2
UBR1-206ENST00000566493 MT1HL1P0DM35 61 aa7.53□□□□□ -1.2
UBR1-206ENST00000566493 SS18Q15532 418 aa7.53□□□□□ -1.2
UBR1-206ENST00000566493 MRAP2Q96G30 205 aa7.53□□□□□ -1.2
UBR1-206ENST00000566493 LINC00474Q9P2X8 69 aa7.53□□□□□ -1.2
UBR1-206ENST00000566493 LINC00959A0A1B0GUT2 108 aa7.52□□□□□ -1.21
UBR1-206ENST00000566493 A0A1B0GUT8 65 aa7.52□□□□□ -1.21
UBR1-206ENST00000566493 FAM231BA6NCW3 169 aa7.52□□□□□ -1.21
UBR1-206ENST00000566493 TSHBP01222 138 aa7.52□□□□□ -1.21
UBR1-206ENST00000566493 ALKAL2Q6UX46 152 aa7.52□□□□□ -1.21
UBR1-206ENST00000566493 LYPD6BQ8NI32 183 aa7.52□□□□□ -1.21
UBR1-206ENST00000566493 EIF5A2Q9GZV4 153 aaKnown RBP7.52□□□□□ -1.21
UBR1-206ENST00000566493 TMEM242Q9NWH2 141 aa7.52□□□□□ -1.21
UBR1-206ENST00000566493 HIGD1CA8MV81 97 aa7.51□□□□□ -1.21
UBR1-206ENST00000566493 ZNF561-AS1K7EIQ3 104 aa7.51□□□□□ -1.21
UBR1-206ENST00000566493 ESDP10768 282 aa7.51□□□□□ -1.21
UBR1-206ENST00000566493 AKAP14Q86UN6 197 aa7.51□□□□□ -1.21
UBR1-206ENST00000566493 TSKUQ8WUA8 353 aa7.51□□□□□ -1.21
UBR1-206ENST00000566493 CARD19Q96LW7 228 aa7.51□□□□□ -1.21
UBR1-206ENST00000566493 SMIM7Q9BQ49 75 aa7.51□□□□□ -1.21
UBR1-206ENST00000566493 TMEM191AQ9H0A3 160 aa7.51□□□□□ -1.21
UBR1-206ENST00000566493 UBR4Q5T4S7 5183 aa7.5□□□□□ -1.21
UBR1-206ENST00000566493 A0A096LNI7 61 aa7.5□□□□□ -1.21
UBR1-206ENST00000566493 SMAGPQ0VAQ4 97 aa7.5□□□□□ -1.21
UBR1-206ENST00000566493 CD164L2Q6UWJ8 174 aa7.5□□□□□ -1.21
UBR1-206ENST00000566493 ZNF664Q8N3J9 261 aa7.5□□□□□ -1.21
UBR1-206ENST00000566493 CDC42SE2Q9NRR3 84 aa7.5□□□□□ -1.21
UBR1-206ENST00000566493 TRBV27A0A0K0K1C4 114 aa7.49□□□□□ -1.21
UBR1-206ENST00000566493 C7orf77A4D0Y5 90 aa7.49□□□□□ -1.21
UBR1-206ENST00000566493 ZNF727A8MUV8 499 aa7.49□□□□□ -1.21
UBR1-206ENST00000566493 VCYO14598 125 aa7.49□□□□□ -1.21
UBR1-206ENST00000566493 GAS8-AS1O95177 125 aa7.49□□□□□ -1.21
UBR1-206ENST00000566493 RAB4AP20338 218 aa7.49□□□□□ -1.21
UBR1-206ENST00000566493 FCER1GP30273 86 aa7.49□□□□□ -1.21
UBR1-206ENST00000566493 POLR2KP53803 58 aaKnown RBP7.49□□□□□ -1.21
UBR1-206ENST00000566493 PRR3P79522 188 aaKnown RBP7.49□□□□□ -1.21
UBR1-206ENST00000566493 RIGQ13278 110 aa7.49□□□□□ -1.21
UBR1-206ENST00000566493 MRPL52Q86TS9 123 aaKnown RBP7.49□□□□□ -1.21
UBR1-206ENST00000566493 LINC01551Q86U37 167 aa7.49□□□□□ -1.21
UBR1-206ENST00000566493 LINC00526Q96FQ7 95 aa7.49□□□□□ -1.21
UBR1-206ENST00000566493 OSTCQ9NRP0 149 aa7.49□□□□□ -1.21
UBR1-206ENST00000566493 PPP1R17O96001 155 aa7.48□□□□□ -1.21
UBR1-206ENST00000566493 MALP21145 153 aa7.48□□□□□ -1.21
UBR1-206ENST00000566493 SYCNQ0VAF6 134 aa7.48□□□□□ -1.21
UBR1-206ENST00000566493 AMN1Q8IY45 258 aa7.48□□□□□ -1.21
UBR1-206ENST00000566493 ISOC2Q96AB3 205 aa7.48□□□□□ -1.21
UBR1-206ENST00000566493 C1orf196B1AJZ1 125 aa7.47□□□□□ -1.21
UBR1-206ENST00000566493 LINC01600Q96MT4 127 aa7.47□□□□□ -1.21
UBR1-206ENST00000566493 SMKR1H3BMG3 65 aa7.46□□□□□ -1.22
UBR1-206ENST00000566493 COX7A2LO14548 114 aa7.46□□□□□ -1.22
UBR1-206ENST00000566493 CAMPP49913 170 aa7.46□□□□□ -1.22
UBR1-206ENST00000566493 REG3GQ6UW15 175 aa7.46□□□□□ -1.22
UBR1-206ENST00000566493 SPINK6Q6UWN8 80 aa7.46□□□□□ -1.22
UBR1-206ENST00000566493 KIR2DL4Q99706 377 aa7.46□□□□□ -1.22
UBR1-206ENST00000566493 hCG_2014768A0A024R1R8 64 aa7.45□□□□□ -1.22
UBR1-206ENST00000566493 LOC107984640A0A0U1RRK4 108 aa7.45□□□□□ -1.22
UBR1-206ENST00000566493 PPP1R2P9O14990 202 aa7.45□□□□□ -1.22
UBR1-206ENST00000566493 SRP19P09132 144 aaKnown RBP7.45□□□□□ -1.22
UBR1-206ENST00000566493 SUMO2P61956 95 aaKnown RBP7.45□□□□□ -1.22
UBR1-206ENST00000566493 GAGE2BQ13066 116 aa7.45□□□□□ -1.22
UBR1-206ENST00000566493 Q6ZRP5 223 aa7.45□□□□□ -1.22
UBR1-206ENST00000566493 NUP35Q8NFH5 326 aa7.45□□□□□ -1.22
UBR1-206ENST00000566493 TMEM18Q96B42 140 aa7.45□□□□□ -1.22
UBR1-206ENST00000566493 CSDC2Q9Y534 153 aaKnown RBP7.45□□□□□ -1.22
UBR1-206ENST00000566493 IGLV4-69A0A075B6H9 119 aa7.44□□□□□ -1.22
UBR1-206ENST00000566493 PTTG1IPP53801 180 aa7.44□□□□□ -1.22
UBR1-206ENST00000566493 TMEM241Q24JQ0 296 aa7.44□□□□□ -1.22
UBR1-206ENST00000566493 CAMK2N2Q96S95 79 aa7.44□□□□□ -1.22
UBR1-206ENST00000566493 NAT8BQ9UHF3 227 aa7.44□□□□□ -1.22
UBR1-206ENST00000566493 UBE2D4Q9Y2X8 147 aa7.44□□□□□ -1.22
UBR1-206ENST00000566493 V9GYV3 84 aa7.44□□□□□ -1.22
UBR1-206ENST00000566493 TNXBP22105 4242 aa7.43□□□□□ -1.22
UBR1-206ENST00000566493 TRAV13-1A0A0B4J241 112 aa7.43□□□□□ -1.22
UBR1-206ENST00000566493 APOMO95445 188 aa7.43□□□□□ -1.22
UBR1-206ENST00000566493 FAM74A3Q4VXF1 159 aa7.43□□□□□ -1.22
UBR1-206ENST00000566493 RNASE13Q5GAN3 156 aaKnown RBP7.43□□□□□ -1.22
UBR1-206ENST00000566493 NRACQ8N912 160 aa7.43□□□□□ -1.22
UBR1-206ENST00000566493 A0A0J9YXV3 536 aa7.42□□□□□ -1.22
UBR1-206ENST00000566493 FAM104BQ5XKR9 115 aa7.42□□□□□ -1.22
UBR1-206ENST00000566493 C2orf48Q96LS8 159 aa7.42□□□□□ -1.22
UBR1-206ENST00000566493 LINC00862A6NCI5 91 aa7.41□□□□□ -1.22
UBR1-206ENST00000566493 TCAPO15273 167 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms