RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 LINC00959A0A1B0GUT2 108 aa11.57□□□□□ -0.56
USB1-213ENST00000566292 XCL1P47992 114 aa11.57□□□□□ -0.56
USB1-213ENST00000566292 MRAP2Q96G30 205 aa11.57□□□□□ -0.56
USB1-213ENST00000566292 TMEM101Q96IK0 257 aa11.57□□□□□ -0.56
USB1-213ENST00000566292 TRBV27A0A0K0K1C4 114 aa11.56□□□□□ -0.56
USB1-213ENST00000566292 CCL25O15444 150 aa11.56□□□□□ -0.56
USB1-213ENST00000566292 MRPL52Q86TS9 123 aaKnown RBP11.56□□□□□ -0.56
USB1-213ENST00000566292 IGKV2-24A0A0C4DH68 120 aa11.55□□□□□ -0.56
USB1-213ENST00000566292 SMKR1H3BMG3 65 aa11.55□□□□□ -0.56
USB1-213ENST00000566292 MT1HL1P0DM35 61 aa11.55□□□□□ -0.56
USB1-213ENST00000566292 Q6ZRU5 148 aa11.55□□□□□ -0.56
USB1-213ENST00000566292 NUP35Q8NFH5 326 aa11.55□□□□□ -0.56
USB1-213ENST00000566292 CDC42SE2Q9NRR3 84 aa11.55□□□□□ -0.56
USB1-213ENST00000566292 PHOX2AO14813 284 aa11.54□□□□□ -0.56
USB1-213ENST00000566292 RIGQ13278 110 aa11.54□□□□□ -0.56
USB1-213ENST00000566292 MAJINQ3KP22 176 aa11.54□□□□□ -0.56
USB1-213ENST00000566292 ISOC2Q96AB3 205 aa11.54□□□□□ -0.56
USB1-213ENST00000566292 LINC00526Q96FQ7 95 aa11.54□□□□□ -0.56
USB1-213ENST00000566292 A0A096LNI7 61 aa11.53□□□□□ -0.56
USB1-213ENST00000566292 C7orf77A4D0Y5 90 aa11.53□□□□□ -0.56
USB1-213ENST00000566292 ZNF664Q8N3J9 261 aa11.53□□□□□ -0.56
USB1-213ENST00000566292 NRACQ8N912 160 aa11.53□□□□□ -0.56
USB1-213ENST00000566292 IGHV1-58A0A0C4DH39 117 aa11.52□□□□□ -0.57
USB1-213ENST00000566292 RPL23P62829 140 aaKnown RBP11.52□□□□□ -0.57
USB1-213ENST00000566292 SS18Q15532 418 aa11.52□□□□□ -0.57
USB1-213ENST00000566292 A0A1B0GVG6 124 aa11.51□□□□□ -0.57
USB1-213ENST00000566292 C9JQL5 133 aa11.51□□□□□ -0.57
USB1-213ENST00000566292 TMEM241Q24JQ0 296 aa11.51□□□□□ -0.57
USB1-213ENST00000566292 STPG4Q8N801 248 aa11.51□□□□□ -0.57
USB1-213ENST00000566292 C7orf33Q8WU49 177 aa11.51□□□□□ -0.57
USB1-213ENST00000566292 VCYO14598 125 aa11.5□□□□□ -0.57
USB1-213ENST00000566292 CD164L2Q6UWJ8 174 aa11.5□□□□□ -0.57
USB1-213ENST00000566292 NAT8BQ9UHF3 227 aa11.5□□□□□ -0.57
USB1-213ENST00000566292 PLA2G2DQ9UNK4 145 aa11.5□□□□□ -0.57
USB1-213ENST00000566292 FCER1GP30273 86 aa11.49□□□□□ -0.57
USB1-213ENST00000566292 SUMO2P61956 95 aaKnown RBP11.49□□□□□ -0.57
USB1-213ENST00000566292 ADIRFQ15847 76 aa11.49□□□□□ -0.57
USB1-213ENST00000566292 MRPL51Q4U2R6 128 aaKnown RBP11.49□□□□□ -0.57
USB1-213ENST00000566292 FAM74A3Q4VXF1 159 aa11.49□□□□□ -0.57
USB1-213ENST00000566292 CARD19Q96LW7 228 aa11.49□□□□□ -0.57
USB1-213ENST00000566292 SRSF3P84103 164 aaKnown RBP11.48□□□□□ -0.57
USB1-213ENST00000566292 FAM104BQ5XKR9 115 aa11.48□□□□□ -0.57
USB1-213ENST00000566292 UBE2D4Q9Y2X8 147 aa11.48□□□□□ -0.57
USB1-213ENST00000566292 TNXBP22105 4242 aa11.47□□□□□ -0.57
USB1-213ENST00000566292 SMIM27A0A1W2PRY6 76 aa11.47□□□□□ -0.57
USB1-213ENST00000566292 PPP1R17O96001 155 aa11.47□□□□□ -0.57
USB1-213ENST00000566292 PRR3P79522 188 aaKnown RBP11.47□□□□□ -0.57
USB1-213ENST00000566292 RNASE13Q5GAN3 156 aaKnown RBP11.47□□□□□ -0.57
USB1-213ENST00000566292 NAT8Q9UHE5 227 aa11.47□□□□□ -0.57
USB1-213ENST00000566292 CSDC2Q9Y534 153 aaKnown RBP11.47□□□□□ -0.57
USB1-213ENST00000566292 ZNF561-AS1K7EIQ3 104 aa11.46□□□□□ -0.57
USB1-213ENST00000566292 SYCNQ0VAF6 134 aa11.46□□□□□ -0.57
USB1-213ENST00000566292 KIR2DL4Q99706 377 aa11.46□□□□□ -0.57
USB1-213ENST00000566292 C1orf196B1AJZ1 125 aa11.45□□□□□ -0.58
USB1-213ENST00000566292 PPP1R2P9O14990 202 aa11.45□□□□□ -0.58
USB1-213ENST00000566292 LINC00474Q9P2X8 69 aa11.45□□□□□ -0.58
USB1-213ENST00000566292 UBR4Q5T4S7 5183 aa11.44□□□□□ -0.58
USB1-213ENST00000566292 CAMPP49913 170 aa11.44□□□□□ -0.58
USB1-213ENST00000566292 Q6ZUT4 128 aa11.44□□□□□ -0.58
USB1-213ENST00000566292 PKIGQ9Y2B9 76 aa11.44□□□□□ -0.58
USB1-213ENST00000566292 IGLV4-69A0A075B6H9 119 aa11.43□□□□□ -0.58
USB1-213ENST00000566292 TRAV13-1A0A0B4J241 112 aa11.43□□□□□ -0.58
USB1-213ENST00000566292 SMAGPQ0VAQ4 97 aa11.43□□□□□ -0.58
USB1-213ENST00000566292 TRBV24-1A0A075B6N3 115 aa11.42□□□□□ -0.58
USB1-213ENST00000566292 LINC00862A6NCI5 91 aa11.42□□□□□ -0.58
USB1-213ENST00000566292 COX7A2LO14548 114 aa11.42□□□□□ -0.58
USB1-213ENST00000566292 MALP21145 153 aa11.42□□□□□ -0.58
USB1-213ENST00000566292 PEA15Q15121 130 aa11.42□□□□□ -0.58
USB1-213ENST00000566292 C20orf78Q9BR46 151 aa11.42□□□□□ -0.58
USB1-213ENST00000566292 TIMM21Q9BVV7 248 aa11.42□□□□□ -0.58
USB1-213ENST00000566292 A0A1B0GW15 77 aa11.41□□□□□ -0.58
USB1-213ENST00000566292 CKS2P33552 79 aa11.41□□□□□ -0.58
USB1-213ENST00000566292 RPL32P62910 135 aaKnown RBP11.41□□□□□ -0.58
USB1-213ENST00000566292 TNFRSF6BO95407 300 aa11.4□□□□□ -0.58
USB1-213ENST00000566292 PTTG1IPP53801 180 aa11.4□□□□□ -0.58
USB1-213ENST00000566292 RPL39P62891 51 aaKnown RBP11.4□□□□□ -0.58
USB1-213ENST00000566292 MRPL54Q6P161 138 aaKnown RBP11.4□□□□□ -0.58
USB1-213ENST00000566292 C5orf38Q86SI9 138 aa11.4□□□□□ -0.58
USB1-213ENST00000566292 FAM104AQ969W3 186 aa11.4□□□□□ -0.58
USB1-213ENST00000566292 TMEM18Q96B42 140 aa11.4□□□□□ -0.58
USB1-213ENST00000566292 LOC107984640A0A0U1RRK4 108 aa11.39□□□□□ -0.59
USB1-213ENST00000566292 A0A1B0GXF2 115 aa11.39□□□□□ -0.59
USB1-213ENST00000566292 SMDT1Q9H4I9 107 aa11.39□□□□□ -0.59
USB1-213ENST00000566292 D6R8Y8 96 aa11.38□□□□□ -0.59
USB1-213ENST00000566292 GAGE2BQ13066 116 aa11.38□□□□□ -0.59
USB1-213ENST00000566292 LINC01600Q96MT4 127 aa11.38□□□□□ -0.59
USB1-213ENST00000566292 CAMK2N2Q96S95 79 aa11.38□□□□□ -0.59
USB1-213ENST00000566292 SMIM2Q9BVW6 85 aa11.38□□□□□ -0.59
USB1-213ENST00000566292 NPYP01303 97 aa11.37□□□□□ -0.59
USB1-213ENST00000566292 HBBP68871 147 aa11.37□□□□□ -0.59
USB1-213ENST00000566292 C2orf48Q96LS8 159 aa11.37□□□□□ -0.59
USB1-213ENST00000566292 A0A1W2PNN7 141 aa11.36□□□□□ -0.59
USB1-213ENST00000566292 TCAPO15273 167 aa11.36□□□□□ -0.59
USB1-213ENST00000566292 OPRPNQ99935 248 aaPredicted RBP11.36□□□□□ -0.59
USB1-213ENST00000566292 F8W036 122 aa11.35□□□□□ -0.59
USB1-213ENST00000566292 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.35□□□□□ -0.59
USB1-213ENST00000566292 APOMO95445 188 aa11.35□□□□□ -0.59
USB1-213ENST00000566292 S100A8P05109 93 aa11.35□□□□□ -0.59
USB1-213ENST00000566292 SPAG11BQ08648 103 aa11.34□□□□□ -0.59
USB1-213ENST00000566292 SRSF9Q13242 221 aaKnown RBP eCLIP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms