RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 CCL25O15444 150 aa14.94□□□□□ -0.02
RAB40C-209ENST00000565511 ZNF25P17030 456 aaPredicted RBP14.94□□□□□ -0.02
RAB40C-209ENST00000565511 RAB4AP20338 218 aa14.94□□□□□ -0.02
RAB40C-209ENST00000565511 FAM210AQ96ND0 272 aa14.94□□□□□ -0.02
RAB40C-209ENST00000565511 A0A096LNI7 61 aa14.93□□□□□ -0.02
RAB40C-209ENST00000565511 NDUFS6O75380 124 aaKnown RBP14.93□□□□□ -0.02
RAB40C-209ENST00000565511 MAJINQ3KP22 176 aa14.93□□□□□ -0.02
RAB40C-209ENST00000565511 OSTCQ9NRP0 149 aa14.93□□□□□ -0.02
RAB40C-209ENST00000565511 PLA2G2DQ9UNK4 145 aa14.93□□□□□ -0.02
RAB40C-209ENST00000565511 V9GYV3 84 aa14.93□□□□□ -0.02
RAB40C-209ENST00000565511 ZNF727A8MUV8 499 aa14.92□□□□□ -0.02
RAB40C-209ENST00000565511 Q6ZRU5 148 aa14.92□□□□□ -0.02
RAB40C-209ENST00000565511 BORCS7Q96B45 105 aa14.92□□□□□ -0.02
RAB40C-209ENST00000565511 MRAP2Q96G30 205 aa14.91□□□□□ -0.02
RAB40C-209ENST00000565511 TRBV27A0A0K0K1C4 114 aa14.9□□□□□ -0.02
RAB40C-209ENST00000565511 MRPL52Q86TS9 123 aaKnown RBP14.9□□□□□ -0.02
RAB40C-209ENST00000565511 TMEM101Q96IK0 257 aa14.9□□□□□ -0.02
RAB40C-209ENST00000565511 CDC42SE2Q9NRR3 84 aa14.9□□□□□ -0.02
RAB40C-209ENST00000565511 STPG4Q8N801 248 aa14.89□□□□□ -0.03
RAB40C-209ENST00000565511 NRACQ8N912 160 aa14.89□□□□□ -0.03
RAB40C-209ENST00000565511 NUP35Q8NFH5 326 aa14.89□□□□□ -0.03
RAB40C-209ENST00000565511 BTF3L4Q96K17 158 aa14.89□□□□□ -0.03
RAB40C-209ENST00000565511 ISOC2Q96AB3 205 aa14.88□□□□□ -0.03
RAB40C-209ENST00000565511 IGHV1-58A0A0C4DH39 117 aa14.87□□□□□ -0.03
RAB40C-209ENST00000565511 C9JQL5 133 aa14.87□□□□□ -0.03
RAB40C-209ENST00000565511 A0A1B0GVG6 124 aa14.86□□□□□ -0.03
RAB40C-209ENST00000565511 C7orf77A4D0Y5 90 aa14.86□□□□□ -0.03
RAB40C-209ENST00000565511 PRR3P79522 188 aaKnown RBP14.86□□□□□ -0.03
RAB40C-209ENST00000565511 RNASE13Q5GAN3 156 aaKnown RBP14.86□□□□□ -0.03
RAB40C-209ENST00000565511 ZNF664Q8N3J9 261 aa14.86□□□□□ -0.03
RAB40C-209ENST00000565511 RPL23P62829 140 aaKnown RBP14.85□□□□□ -0.03
RAB40C-209ENST00000565511 C7orf33Q8WU49 177 aa14.85□□□□□ -0.03
RAB40C-209ENST00000565511 CD164L2Q6UWJ8 174 aa14.84□□□□□ -0.03
RAB40C-209ENST00000565511 CARD19Q96LW7 228 aa14.84□□□□□ -0.03
RAB40C-209ENST00000565511 RIGQ13278 110 aa14.83□□□□□ -0.04
RAB40C-209ENST00000565511 SS18Q15532 418 aa14.83□□□□□ -0.04
RAB40C-209ENST00000565511 SRSF3P84103 164 aaKnown RBP14.82□□□□□ -0.04
RAB40C-209ENST00000565511 ODF1Q14990 250 aa14.82□□□□□ -0.04
RAB40C-209ENST00000565511 UBE2D4Q9Y2X8 147 aa14.82□□□□□ -0.04
RAB40C-209ENST00000565511 SUMO2P61956 95 aaKnown RBP14.81□□□□□ -0.04
RAB40C-209ENST00000565511 MRPL51Q4U2R6 128 aaKnown RBP14.81□□□□□ -0.04
RAB40C-209ENST00000565511 VCYO14598 125 aa14.8□□□□□ -0.04
RAB40C-209ENST00000565511 FCER1GP30273 86 aa14.8□□□□□ -0.04
RAB40C-209ENST00000565511 TMEM241Q24JQ0 296 aa14.8□□□□□ -0.04
RAB40C-209ENST00000565511 Q6ZUT4 128 aa14.8□□□□□ -0.04
RAB40C-209ENST00000565511 SYCNQ0VAF6 134 aa14.79□□□□□ -0.04
RAB40C-209ENST00000565511 ADIRFQ15847 76 aa14.79□□□□□ -0.04
RAB40C-209ENST00000565511 FAM104BQ5XKR9 115 aa14.79□□□□□ -0.04
RAB40C-209ENST00000565511 NAT8BQ9UHF3 227 aa14.79□□□□□ -0.04
RAB40C-209ENST00000565511 IGLV4-69A0A075B6H9 119 aa14.78□□□□□ -0.04
RAB40C-209ENST00000565511 CAMPP49913 170 aa14.78□□□□□ -0.04
RAB40C-209ENST00000565511 SMIM27A0A1W2PRY6 76 aa14.77□□□□□ -0.05
RAB40C-209ENST00000565511 FAM74A3Q4VXF1 159 aa14.77□□□□□ -0.05
RAB40C-209ENST00000565511 FAM104AQ969W3 186 aa14.77□□□□□ -0.05
RAB40C-209ENST00000565511 ZNF561-AS1K7EIQ3 104 aa14.76□□□□□ -0.05
RAB40C-209ENST00000565511 CSDC2Q9Y534 153 aaKnown RBP14.76□□□□□ -0.05
RAB40C-209ENST00000565511 TRAV13-1A0A0B4J241 112 aa14.75□□□□□ -0.05
RAB40C-209ENST00000565511 NAT8Q9UHE5 227 aa14.75□□□□□ -0.05
RAB40C-209ENST00000565511 COX7A2LO14548 114 aa14.74□□□□□ -0.05
RAB40C-209ENST00000565511 PTTG1IPP53801 180 aa14.74□□□□□ -0.05
RAB40C-209ENST00000565511 RPL39P62891 51 aaKnown RBP14.74□□□□□ -0.05
RAB40C-209ENST00000565511 C1orf196B1AJZ1 125 aa14.73□□□□□ -0.05
RAB40C-209ENST00000565511 LRP2P98164 4655 aa14.73□□□□□ -0.05
RAB40C-209ENST00000565511 C5orf38Q86SI9 138 aa14.73□□□□□ -0.05
RAB40C-209ENST00000565511 LINC01600Q96MT4 127 aa14.73□□□□□ -0.05
RAB40C-209ENST00000565511 KIR2DL4Q99706 377 aa14.73□□□□□ -0.05
RAB40C-209ENST00000565511 LINC00474Q9P2X8 69 aa14.73□□□□□ -0.05
RAB40C-209ENST00000565511 A0A1W2PNN7 141 aa14.72□□□□□ -0.05
RAB40C-209ENST00000565511 PPP1R17O96001 155 aa14.72□□□□□ -0.05
RAB40C-209ENST00000565511 GAGE2BQ13066 116 aa14.72□□□□□ -0.05
RAB40C-209ENST00000565511 PPP1R2P9O14990 202 aa14.71□□□□□ -0.05
RAB40C-209ENST00000565511 MALP21145 153 aa14.71□□□□□ -0.05
RAB40C-209ENST00000565511 MRPL54Q6P161 138 aaKnown RBP14.71□□□□□ -0.05
RAB40C-209ENST00000565511 TIMM21Q9BVV7 248 aa14.71□□□□□ -0.05
RAB40C-209ENST00000565511 TRBV24-1A0A075B6N3 115 aa14.7□□□□□ -0.06
RAB40C-209ENST00000565511 OPRPNQ99935 248 aaPredicted RBP14.7□□□□□ -0.06
RAB40C-209ENST00000565511 C20orf78Q9BR46 151 aa14.7□□□□□ -0.06
RAB40C-209ENST00000565511 LOC107984640A0A0U1RRK4 108 aa14.69□□□□□ -0.06
RAB40C-209ENST00000565511 A0A1B0GXF2 115 aa14.69□□□□□ -0.06
RAB40C-209ENST00000565511 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.69□□□□□ -0.06
RAB40C-209ENST00000565511 TNFRSF6BO95407 300 aa14.69□□□□□ -0.06
RAB40C-209ENST00000565511 CKS2P33552 79 aa14.69□□□□□ -0.06
RAB40C-209ENST00000565511 RPL32P62910 135 aaKnown RBP14.69□□□□□ -0.06
RAB40C-209ENST00000565511 PKIGQ9Y2B9 76 aa14.69□□□□□ -0.06
RAB40C-209ENST00000565511 A0A0J9YXV3 536 aa14.68□□□□□ -0.06
RAB40C-209ENST00000565511 D6R8Y8 96 aa14.68□□□□□ -0.06
RAB40C-209ENST00000565511 NPYP01303 97 aa14.68□□□□□ -0.06
RAB40C-209ENST00000565511 SRSF9Q13242 221 aaKnown RBP eCLIP14.68□□□□□ -0.06
RAB40C-209ENST00000565511 CAMK2N2Q96S95 79 aa14.68□□□□□ -0.06
RAB40C-209ENST00000565511 SMIM2Q9BVW6 85 aa14.68□□□□□ -0.06
RAB40C-209ENST00000565511 LINC00862A6NCI5 91 aa14.67□□□□□ -0.06
RAB40C-209ENST00000565511 SPAG11BQ08648 103 aa14.66□□□□□ -0.06
RAB40C-209ENST00000565511 C2orf48Q96LS8 159 aa14.66□□□□□ -0.06
RAB40C-209ENST00000565511 A0A1B0GW15 77 aa14.65□□□□□ -0.06
RAB40C-209ENST00000565511 TCAPO15273 167 aa14.65□□□□□ -0.06
RAB40C-209ENST00000565511 APOMO95445 188 aa14.65□□□□□ -0.06
RAB40C-209ENST00000565511 PEA15Q15121 130 aa14.65□□□□□ -0.06
RAB40C-209ENST00000565511 SPINK6Q6UWN8 80 aa14.65□□□□□ -0.06
RAB40C-209ENST00000565511 HBBP68871 147 aa14.64□□□□□ -0.07
RAB40C-209ENST00000565511 SMAGPQ0VAQ4 97 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms