RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 BLOC1S1P78537 153 aa13.09□□□□□ -0.31
CHD9-208ENST00000563410 LINC01600Q96MT4 127 aa13.09□□□□□ -0.31
CHD9-208ENST00000563410 TMEM191AQ9H0A3 160 aa13.09□□□□□ -0.31
CHD9-208ENST00000563410 CDC42SE2Q9NRR3 84 aa13.09□□□□□ -0.31
CHD9-208ENST00000563410 MRPL52Q86TS9 123 aaKnown RBP13.08□□□□□ -0.32
CHD9-208ENST00000563410 MRAP2Q96G30 205 aa13.08□□□□□ -0.32
CHD9-208ENST00000563410 TRBV27A0A0K0K1C4 114 aa13.07□□□□□ -0.32
CHD9-208ENST00000563410 CEBPGP53567 150 aa13.07□□□□□ -0.32
CHD9-208ENST00000563410 FAM210AQ96ND0 272 aa13.07□□□□□ -0.32
CHD9-208ENST00000563410 A0A1B0GUT8 65 aa13.06□□□□□ -0.32
CHD9-208ENST00000563410 HIGD1CA8MV81 97 aa13.06□□□□□ -0.32
CHD9-208ENST00000563410 RAB4AP20338 218 aa13.06□□□□□ -0.32
CHD9-208ENST00000563410 TSKUQ8WUA8 353 aa13.06□□□□□ -0.32
CHD9-208ENST00000563410 BORCS7Q96B45 105 aa13.06□□□□□ -0.32
CHD9-208ENST00000563410 CARD19Q96LW7 228 aa13.06□□□□□ -0.32
CHD9-208ENST00000563410 LINC00474Q9P2X8 69 aa13.06□□□□□ -0.32
CHD9-208ENST00000563410 SS18Q15532 418 aa13.05□□□□□ -0.32
CHD9-208ENST00000563410 CD164L2Q6UWJ8 174 aa13.05□□□□□ -0.32
CHD9-208ENST00000563410 LINC01551Q86U37 167 aa13.05□□□□□ -0.32
CHD9-208ENST00000563410 ZNF664Q8N3J9 261 aa13.05□□□□□ -0.32
CHD9-208ENST00000563410 AMN1Q8IY45 258 aa13.04□□□□□ -0.32
CHD9-208ENST00000563410 SMIM7Q9BQ49 75 aa13.04□□□□□ -0.32
CHD9-208ENST00000563410 C7orf77A4D0Y5 90 aa13.03□□□□□ -0.32
CHD9-208ENST00000563410 SYCNQ0VAF6 134 aa13.03□□□□□ -0.32
CHD9-208ENST00000563410 ODF1Q14990 250 aa13.03□□□□□ -0.32
CHD9-208ENST00000563410 PKIGQ9Y2B9 76 aa13.03□□□□□ -0.32
CHD9-208ENST00000563410 SMKR1H3BMG3 65 aa13.02□□□□□ -0.33
CHD9-208ENST00000563410 ZNF561-AS1K7EIQ3 104 aa13.02□□□□□ -0.33
CHD9-208ENST00000563410 OSTCQ9NRP0 149 aa13.02□□□□□ -0.33
CHD9-208ENST00000563410 SPINK6Q6UWN8 80 aa13.01□□□□□ -0.33
CHD9-208ENST00000563410 A0A0J9YXV3 536 aa13□□□□□ -0.33
CHD9-208ENST00000563410 CAMPP49913 170 aa13□□□□□ -0.33
CHD9-208ENST00000563410 SRSF9Q13242 221 aaKnown RBP eCLIP13□□□□□ -0.33
CHD9-208ENST00000563410 AKAP14Q86UN6 197 aa13□□□□□ -0.33
CHD9-208ENST00000563410 EIF5A2Q9GZV4 153 aaKnown RBP13□□□□□ -0.33
CHD9-208ENST00000563410 V9GYV3 84 aa13□□□□□ -0.33
CHD9-208ENST00000563410 RNF213Q63HN8 5207 aa13□□□□□ -0.33
CHD9-208ENST00000563410 ZNF727A8MUV8 499 aa12.99□□□□□ -0.33
CHD9-208ENST00000563410 PTTG1IPP53801 180 aa12.99□□□□□ -0.33
CHD9-208ENST00000563410 KRTAP10-8P60410 259 aa12.99□□□□□ -0.33
CHD9-208ENST00000563410 NRACQ8N912 160 aa12.99□□□□□ -0.33
CHD9-208ENST00000563410 IGLV4-69A0A075B6H9 119 aa12.98□□□□□ -0.33
CHD9-208ENST00000563410 VCYO14598 125 aa12.98□□□□□ -0.33
CHD9-208ENST00000563410 SRP19P09132 144 aaKnown RBP12.98□□□□□ -0.33
CHD9-208ENST00000563410 NUP35Q8NFH5 326 aa12.98□□□□□ -0.33
CHD9-208ENST00000563410 UBE2D4Q9Y2X8 147 aa12.98□□□□□ -0.33
CHD9-208ENST00000563410 CSDC2Q9Y534 153 aaKnown RBP12.98□□□□□ -0.33
CHD9-208ENST00000563410 C1orf196B1AJZ1 125 aa12.97□□□□□ -0.33
CHD9-208ENST00000563410 FCER1GP30273 86 aa12.97□□□□□ -0.33
CHD9-208ENST00000563410 RNASE13Q5GAN3 156 aaKnown RBP12.97□□□□□ -0.33
CHD9-208ENST00000563410 Q6ZRP5 223 aa12.97□□□□□ -0.33
CHD9-208ENST00000563410 LOC107984640A0A0U1RRK4 108 aa12.96□□□□□ -0.33
CHD9-208ENST00000563410 SUMO2P61956 95 aaKnown RBP12.96□□□□□ -0.33
CHD9-208ENST00000563410 RIGQ13278 110 aa12.96□□□□□ -0.33
CHD9-208ENST00000563410 COX7A2LO14548 114 aa12.95□□□□□ -0.34
CHD9-208ENST00000563410 MALP21145 153 aa12.95□□□□□ -0.34
CHD9-208ENST00000563410 GAGE2BQ13066 116 aa12.95□□□□□ -0.34
CHD9-208ENST00000563410 REG3GQ6UW15 175 aa12.95□□□□□ -0.34
CHD9-208ENST00000563410 ISOC2Q96AB3 205 aa12.95□□□□□ -0.34
CHD9-208ENST00000563410 A0A1W2PNN7 141 aa12.94□□□□□ -0.34
CHD9-208ENST00000563410 PPP1R17O96001 155 aa12.94□□□□□ -0.34
CHD9-208ENST00000563410 hCG_2014768A0A024R1R8 64 aa12.93□□□□□ -0.34
CHD9-208ENST00000563410 TRAV13-1A0A0B4J241 112 aa12.93□□□□□ -0.34
CHD9-208ENST00000563410 Q6ZUT4 128 aa12.93□□□□□ -0.34
CHD9-208ENST00000563410 KIR2DL4Q99706 377 aa12.93□□□□□ -0.34
CHD9-208ENST00000563410 MRPL51Q4U2R6 128 aaKnown RBP12.92□□□□□ -0.34
CHD9-208ENST00000563410 FAM104BQ5XKR9 115 aa12.92□□□□□ -0.34
CHD9-208ENST00000563410 CAMK2N2Q96S95 79 aa12.92□□□□□ -0.34
CHD9-208ENST00000563410 NAT8BQ9UHF3 227 aa12.92□□□□□ -0.34
CHD9-208ENST00000563410 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.91□□□□□ -0.34
CHD9-208ENST00000563410 PPP1R2P9O14990 202 aa12.91□□□□□ -0.34
CHD9-208ENST00000563410 RPL23P62829 140 aaKnown RBP12.91□□□□□ -0.34
CHD9-208ENST00000563410 SMAGPQ0VAQ4 97 aa12.91□□□□□ -0.34
CHD9-208ENST00000563410 C5orf38Q86SI9 138 aa12.91□□□□□ -0.34
CHD9-208ENST00000563410 C2orf48Q96LS8 159 aa12.91□□□□□ -0.34
CHD9-208ENST00000563410 TIMM21Q9BVV7 248 aa12.91□□□□□ -0.34
CHD9-208ENST00000563410 APOMO95445 188 aa12.9□□□□□ -0.34
CHD9-208ENST00000563410 TMEM241Q24JQ0 296 aa12.89□□□□□ -0.35
CHD9-208ENST00000563410 FAM104AQ969W3 186 aa12.89□□□□□ -0.35
CHD9-208ENST00000563410 FAM74A3Q4VXF1 159 aa12.88□□□□□ -0.35
CHD9-208ENST00000563410 C9orf116Q5BN46 136 aaPredicted RBP12.88□□□□□ -0.35
CHD9-208ENST00000563410 TRBV24-1A0A075B6N3 115 aa12.87□□□□□ -0.35
CHD9-208ENST00000563410 SMIM27A0A1W2PRY6 76 aa12.87□□□□□ -0.35
CHD9-208ENST00000563410 LINC00862A6NCI5 91 aa12.87□□□□□ -0.35
CHD9-208ENST00000563410 RPL39P62891 51 aaKnown RBP12.87□□□□□ -0.35
CHD9-208ENST00000563410 RPL32P62910 135 aaKnown RBP12.87□□□□□ -0.35
CHD9-208ENST00000563410 TMEM18Q96B42 140 aa12.87□□□□□ -0.35
CHD9-208ENST00000563410 OPRPNQ99935 248 aaPredicted RBP12.87□□□□□ -0.35
CHD9-208ENST00000563410 C20orf78Q9BR46 151 aa12.87□□□□□ -0.35
CHD9-208ENST00000563410 PSORS1C2Q9UIG4 136 aa12.87□□□□□ -0.35
CHD9-208ENST00000563410 C9JQL5 133 aa12.86□□□□□ -0.35
CHD9-208ENST00000563410 RPL18AQ02543 176 aaKnown RBP12.86□□□□□ -0.35
CHD9-208ENST00000563410 SPAG11BQ08648 103 aa12.86□□□□□ -0.35
CHD9-208ENST00000563410 ADIRFQ15847 76 aa12.86□□□□□ -0.35
CHD9-208ENST00000563410 RNF151Q2KHN1 245 aa12.85□□□□□ -0.35
CHD9-208ENST00000563410 CKS2P33552 79 aa12.84□□□□□ -0.35
CHD9-208ENST00000563410 PHF5AQ7RTV0 110 aaKnown RBP12.84□□□□□ -0.35
CHD9-208ENST00000563410 OR10D4PQ8NGN7 298 aa12.84□□□□□ -0.35
CHD9-208ENST00000563410 NAT8Q9UHE5 227 aa12.84□□□□□ -0.35
CHD9-208ENST00000563410 TNFRSF6BO95407 300 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms