RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 KIR2DL4Q99706 377 aa18.35■□□□□ 0.53
NME3-203ENST00000563367 TMEM218A2RU14 115 aa18.34■□□□□ 0.53
NME3-203ENST00000563367 CLRN3Q8NCR9 226 aa18.34■□□□□ 0.53
NME3-203ENST00000563367 CHCHD10Q8WYQ3 142 aaPredicted RBP18.34■□□□□ 0.53
NME3-203ENST00000563367 VPS13BQ7Z7G8 4022 aa18.33■□□□□ 0.53
NME3-203ENST00000563367 NPYP01303 97 aa18.33■□□□□ 0.52
NME3-203ENST00000563367 RPL32P62910 135 aaKnown RBP18.33■□□□□ 0.52
NME3-203ENST00000563367 DGAT2L7PQ6IED9 249 aa18.33■□□□□ 0.52
NME3-203ENST00000563367 CDC42SE2Q9NRR3 84 aa18.33■□□□□ 0.52
NME3-203ENST00000563367 Q5VSD8 79 aa18.32■□□□□ 0.52
NME3-203ENST00000563367 hDV102S1A0JD36 115 aa18.3■□□□□ 0.52
NME3-203ENST00000563367 PPBPP02775 128 aa18.3■□□□□ 0.52
NME3-203ENST00000563367 ZNF664Q8N3J9 261 aa18.3■□□□□ 0.52
NME3-203ENST00000563367 SMIM2Q9BVW6 85 aa18.3■□□□□ 0.52
NME3-203ENST00000563367 LINC00959A0A1B0GUT2 108 aa18.29■□□□□ 0.52
NME3-203ENST00000563367 C15orf56Q8N910 161 aa18.29■□□□□ 0.52
NME3-203ENST00000563367 C9orf163Q8N9P6 203 aa18.29■□□□□ 0.52
NME3-203ENST00000563367 UBE2D4Q9Y2X8 147 aa18.29■□□□□ 0.52
NME3-203ENST00000563367 PHOX2AO14813 284 aa18.28■□□□□ 0.52
NME3-203ENST00000563367 TMEM136Q6ZRR5 245 aa18.28■□□□□ 0.52
NME3-203ENST00000563367 COMMD7Q86VX2 200 aa18.28■□□□□ 0.52
NME3-203ENST00000563367 ORMDL3Q8N138 153 aa18.28■□□□□ 0.52
NME3-203ENST00000563367 SLPIP03973 132 aa18.27■□□□□ 0.52
NME3-203ENST00000563367 FOXI1Q12951 378 aa18.27■□□□□ 0.52
NME3-203ENST00000563367 SCXQ7RTU7 201 aa18.27■□□□□ 0.52
NME3-203ENST00000563367 XCL1P47992 114 aa18.26■□□□□ 0.51
NME3-203ENST00000563367 PRELID3AQ96N28 172 aa18.26■□□□□ 0.51
NME3-203ENST00000563367 CSDC2Q9Y534 153 aaKnown RBP18.26■□□□□ 0.51
NME3-203ENST00000563367 CCL25O15444 150 aa18.25■□□□□ 0.51
NME3-203ENST00000563367 CNBPP62633 177 aaKnown RBP18.25■□□□□ 0.51
NME3-203ENST00000563367 CHAC1Q9BUX1 264 aa18.25■□□□□ 0.51
NME3-203ENST00000563367 SEC11CQ9BY50 192 aa18.25■□□□□ 0.51
NME3-203ENST00000563367 TCAPO15273 167 aa18.24■□□□□ 0.51
NME3-203ENST00000563367 FAM229AH3BQW9 127 aa18.23■□□□□ 0.51
NME3-203ENST00000563367 RPL39P62891 51 aaKnown RBP18.23■□□□□ 0.51
NME3-203ENST00000563367 RNASE13Q5GAN3 156 aaKnown RBP18.23■□□□□ 0.51
NME3-203ENST00000563367 CFAP161Q6P656 301 aa18.23■□□□□ 0.51
NME3-203ENST00000563367 IMMP2LQ96T52 175 aa18.23■□□□□ 0.51
NME3-203ENST00000563367 SS18Q15532 418 aa18.22■□□□□ 0.51
NME3-203ENST00000563367 TIMM21Q9BVV7 248 aa18.22■□□□□ 0.51
NME3-203ENST00000563367 AP5S1Q9NUS5 200 aa18.22■□□□□ 0.51
NME3-203ENST00000563367 SMAGPQ0VAQ4 97 aa18.21■□□□□ 0.51
NME3-203ENST00000563367 HIGD2BQ4VC39 106 aa18.21■□□□□ 0.51
NME3-203ENST00000563367 CIRBP-AS1Q8TBR5 109 aa18.21■□□□□ 0.51
NME3-203ENST00000563367 TMEM18Q96B42 140 aa18.21■□□□□ 0.51
NME3-203ENST00000563367 CTDSP1Q9GZU7 261 aa18.21■□□□□ 0.51
NME3-203ENST00000563367 SRRM2Q9UQ35 2752 aaKnown RBP18.2■□□□□ 0.5
NME3-203ENST00000563367 SDIM1Q6ZPB5 146 aa18.2■□□□□ 0.5
NME3-203ENST00000563367 Q6ZUT4 128 aa18.2■□□□□ 0.5
NME3-203ENST00000563367 FAM104AQ969W3 186 aa18.18■□□□□ 0.5
NME3-203ENST00000563367 PRSS47A8MTI9 375 aa18.17■□□□□ 0.5
NME3-203ENST00000563367 C10orf91Q5T1B1 145 aa18.17■□□□□ 0.5
NME3-203ENST00000563367 CD164L2Q6UWJ8 174 aa18.17■□□□□ 0.5
NME3-203ENST00000563367 LINC00528Q8N1L1 170 aa18.17■□□□□ 0.5
NME3-203ENST00000563367 LAMTOR2Q9Y2Q5 125 aa18.17■□□□□ 0.5
NME3-203ENST00000563367 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP18.17■□□□□ 0.5
NME3-203ENST00000563367 GVQW2A0A096LPI5 108 aaPredicted RBP18.16■□□□□ 0.5
NME3-203ENST00000563367 LOC389332A0A1B0GUA5 103 aa18.16■□□□□ 0.5
NME3-203ENST00000563367 PANO1I0J062 215 aa18.16■□□□□ 0.5
NME3-203ENST00000563367 INAFM2P0DMQ5 153 aa18.16■□□□□ 0.5
NME3-203ENST00000563367 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.15■□□□□ 0.5
NME3-203ENST00000563367 OPRPNQ99935 248 aaPredicted RBP18.15■□□□□ 0.5
NME3-203ENST00000563367 TRAV13-1A0A0B4J241 112 aa18.14■□□□□ 0.49
NME3-203ENST00000563367 C1orf196B1AJZ1 125 aa18.14■□□□□ 0.49
NME3-203ENST00000563367 RAB5AP20339 215 aa18.14■□□□□ 0.49
NME3-203ENST00000563367 MAP1LC3AQ9H492 121 aa18.14■□□□□ 0.49
NME3-203ENST00000563367 SPANXA1Q9NS26 97 aa18.14■□□□□ 0.49
NME3-203ENST00000563367 IGHV3-64A0A075B6Q5 118 aa18.13■□□□□ 0.49
NME3-203ENST00000563367 TRAV9-1A0A075B6T8 112 aa18.12■□□□□ 0.49
NME3-203ENST00000563367 IGHV1-58A0A0C4DH39 117 aa18.12■□□□□ 0.49
NME3-203ENST00000563367 CARHSP1Q9Y2V2 147 aaKnown RBP18.11■□□□□ 0.49
NME3-203ENST00000563367 Q8N8P6 123 aa18.1■□□□□ 0.49
NME3-203ENST00000563367 LINC00526Q96FQ7 95 aa18.1■□□□□ 0.49
NME3-203ENST00000563367 MRPS36P82909 103 aaKnown RBP18.09■□□□□ 0.49
NME3-203ENST00000563367 KIAA1644Q3SXP7 199 aa18.08■□□□□ 0.48
NME3-203ENST00000563367 FLG2Q5D862 2391 aaPredicted RBP18.07■□□□□ 0.48
NME3-203ENST00000563367 CIRBPQ14011 172 aaKnown RBP18.07■□□□□ 0.48
NME3-203ENST00000563367 COX7A2LO14548 114 aa18.06■□□□□ 0.48
NME3-203ENST00000563367 PLA2G1BP04054 148 aaKnown RBP18.06■□□□□ 0.48
NME3-203ENST00000563367 CHTF8P0CG12 524 aa18.06■□□□□ 0.48
NME3-203ENST00000563367 S100PP25815 95 aa18.06■□□□□ 0.48
NME3-203ENST00000563367 IFI27P40305 119 aaPredicted RBP18.04■□□□□ 0.48
NME3-203ENST00000563367 COX6A2Q02221 97 aa18.04■□□□□ 0.48
NME3-203ENST00000563367 RHEBQ15382 184 aa18.04■□□□□ 0.48
NME3-203ENST00000563367 C5orf38Q86SI9 138 aa18.04■□□□□ 0.48
NME3-203ENST00000563367 RPS10P5Q9NQ39 176 aa18.04■□□□□ 0.48
NME3-203ENST00000563367 PYGO1Q9Y3Y4 419 aa18.04■□□□□ 0.48
NME3-203ENST00000563367 MALP21145 153 aa18.03■□□□□ 0.48
NME3-203ENST00000563367 PRSS3P2Q8NHM4 247 aa18.03■□□□□ 0.48
NME3-203ENST00000563367 IGLV4-3A0A075B6K6 122 aa18.02■□□□□ 0.48
NME3-203ENST00000563367 IFITM10A6NMD0 228 aa18.01■□□□□ 0.47
NME3-203ENST00000563367 ZNF561-AS1K7EIQ3 104 aa18.01■□□□□ 0.47
NME3-203ENST00000563367 KRTAP10-4P60372 401 aaPredicted RBP18.01■□□□□ 0.47
NME3-203ENST00000563367 SPACA4Q8TDM5 124 aa18.01■□□□□ 0.47
NME3-203ENST00000563367 GNB1LQ9BYB4 327 aa18.01■□□□□ 0.47
NME3-203ENST00000563367 C2orf66Q6UXQ4 117 aa18■□□□□ 0.47
NME3-203ENST00000563367 NXT2Q9NPJ8 142 aaKnown RBP18■□□□□ 0.47
NME3-203ENST00000563367 IGLV4-69A0A075B6H9 119 aa17.99■□□□□ 0.47
NME3-203ENST00000563367 ORMDL2Q53FV1 153 aa17.99■□□□□ 0.47
NME3-203ENST00000563367 CYSLTR1Q9Y271 337 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms