RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 OR5A1Q8NGJ0 315 aa4.49□□□□□ -1.69
HERPUD1-206ENST00000563343 MED9Q9NWA0 146 aa4.49□□□□□ -1.69
HERPUD1-206ENST00000563343 FAM168BA1KXE4 195 aa4.48□□□□□ -1.69
HERPUD1-206ENST00000563343 MGPP08493 103 aa4.48□□□□□ -1.69
HERPUD1-206ENST00000563343 GIPP09681 153 aaPredicted RBP4.48□□□□□ -1.69
HERPUD1-206ENST00000563343 SMIM17P0DL12 118 aa4.48□□□□□ -1.69
HERPUD1-206ENST00000563343 UBE2G2P60604 165 aa4.48□□□□□ -1.69
HERPUD1-206ENST00000563343 SSTP61278 116 aa4.48□□□□□ -1.69
HERPUD1-206ENST00000563343 CLLU1Q5K131 121 aa4.48□□□□□ -1.69
HERPUD1-206ENST00000563343 PSMG3Q9BT73 122 aaPredicted RBP4.48□□□□□ -1.69
HERPUD1-206ENST00000563343 MLST8Q9BVC4 326 aa4.48□□□□□ -1.69
HERPUD1-206ENST00000563343 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
HERPUD1-206ENST00000563343 NIT2Q9NQR4 276 aa4.48□□□□□ -1.69
HERPUD1-206ENST00000563343 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.47□□□□□ -1.69
HERPUD1-206ENST00000563343 IGKV2-29A2NJV5 120 aaPredicted RBP4.47□□□□□ -1.69
HERPUD1-206ENST00000563343 CRYGAP11844 174 aa4.47□□□□□ -1.69
HERPUD1-206ENST00000563343 NTF3P20783 257 aa4.47□□□□□ -1.69
HERPUD1-206ENST00000563343 UBE2G1P62253 170 aa4.47□□□□□ -1.69
HERPUD1-206ENST00000563343 RPL18AQ02543 176 aaKnown RBP4.47□□□□□ -1.69
HERPUD1-206ENST00000563343 SLC7A5P1Q8MH63 180 aa4.47□□□□□ -1.69
HERPUD1-206ENST00000563343 C9orf62Q8N4C0 152 aa4.47□□□□□ -1.69
HERPUD1-206ENST00000563343 ISOC2Q96AB3 205 aa4.47□□□□□ -1.69
HERPUD1-206ENST00000563343 OPRPNQ99935 248 aaPredicted RBP4.47□□□□□ -1.69
HERPUD1-206ENST00000563343 IGLV7-46A0A075B6I9 117 aa4.46□□□□□ -1.7
HERPUD1-206ENST00000563343 H7C423 109 aa4.46□□□□□ -1.7
HERPUD1-206ENST00000563343 IGLC6P0CF74 106 aa4.46□□□□□ -1.7
HERPUD1-206ENST00000563343 SERF2P84101 59 aa4.46□□□□□ -1.7
HERPUD1-206ENST00000563343 RNASEKQ6P5S7 137 aaKnown RBP4.46□□□□□ -1.7
HERPUD1-206ENST00000563343 TEX261Q6UWH6 196 aa4.46□□□□□ -1.7
HERPUD1-206ENST00000563343 CD164L2Q6UWJ8 174 aa4.46□□□□□ -1.7
HERPUD1-206ENST00000563343 TSKUQ8WUA8 353 aa4.46□□□□□ -1.7
HERPUD1-206ENST00000563343 C2orf48Q96LS8 159 aa4.46□□□□□ -1.7
HERPUD1-206ENST00000563343 NKX6-2Q9C056 277 aaPredicted RBP4.46□□□□□ -1.7
HERPUD1-206ENST00000563343 ACTR3CQ9C0K3 210 aaPredicted RBP4.46□□□□□ -1.7
HERPUD1-206ENST00000563343 TNFSF18Q9UNG2 199 aa4.46□□□□□ -1.7
HERPUD1-206ENST00000563343 HMSDA8MTL9 139 aa4.45□□□□□ -1.7
HERPUD1-206ENST00000563343 BCL2L11O43521 198 aa4.45□□□□□ -1.7
HERPUD1-206ENST00000563343 MBP02144 154 aa4.45□□□□□ -1.7
HERPUD1-206ENST00000563343 ZNF25P17030 456 aaPredicted RBP4.45□□□□□ -1.7
HERPUD1-206ENST00000563343 RNF151Q2KHN1 245 aa4.45□□□□□ -1.7
HERPUD1-206ENST00000563343 KRTAP19-2Q3LHN2 52 aa4.45□□□□□ -1.7
HERPUD1-206ENST00000563343 ASB16-AS1Q495Z4 193 aa4.45□□□□□ -1.7
HERPUD1-206ENST00000563343 AMMECR1LQ6DCA0 310 aa4.45□□□□□ -1.7
HERPUD1-206ENST00000563343 CAMK2N2Q96S95 79 aa4.45□□□□□ -1.7
HERPUD1-206ENST00000563343 SSNA1O43805 119 aa4.44□□□□□ -1.7
HERPUD1-206ENST00000563343 ZNF861PO60384 105 aa4.44□□□□□ -1.7
HERPUD1-206ENST00000563343 NCR2O95944 276 aa4.44□□□□□ -1.7
HERPUD1-206ENST00000563343 PET100P0DJ07 73 aa4.44□□□□□ -1.7
HERPUD1-206ENST00000563343 ESDP10768 282 aa4.44□□□□□ -1.7
HERPUD1-206ENST00000563343 KRTAP13-2Q52LG2 175 aa4.44□□□□□ -1.7
HERPUD1-206ENST00000563343 FAM19A5Q7Z5A7 132 aaPredicted RBP4.44□□□□□ -1.7
HERPUD1-206ENST00000563343 TYMSOSQ8TAI1 123 aa4.44□□□□□ -1.7
HERPUD1-206ENST00000563343 CTXND1A0A1B0GTU2 59 aa4.43□□□□□ -1.7
HERPUD1-206ENST00000563343 C19orf71A6NCJ1 209 aa4.43□□□□□ -1.7
HERPUD1-206ENST00000563343 TLX1NBP0CAT3 122 aa4.43□□□□□ -1.7
HERPUD1-206ENST00000563343 AKR1C3P42330 323 aa4.43□□□□□ -1.7
HERPUD1-206ENST00000563343 PCP4P48539 62 aa4.43□□□□□ -1.7
HERPUD1-206ENST00000563343 FHITP49789 147 aa4.43□□□□□ -1.7
HERPUD1-206ENST00000563343 MT1HP80294 61 aa4.43□□□□□ -1.7
HERPUD1-206ENST00000563343 ZNF345Q14585 488 aa4.43□□□□□ -1.7
HERPUD1-206ENST00000563343 SS18Q15532 418 aa4.43□□□□□ -1.7
HERPUD1-206ENST00000563343 GATD1Q8NB37 220 aa4.43□□□□□ -1.7
HERPUD1-206ENST00000563343 TCEAL7Q9BRU2 100 aa4.43□□□□□ -1.7
HERPUD1-206ENST00000563343 G3V3Q6 166 aa4.42□□□□□ -1.7
HERPUD1-206ENST00000563343 M0QXV9 152 aa4.42□□□□□ -1.7
HERPUD1-206ENST00000563343 APCSP02743 223 aa4.42□□□□□ -1.7
HERPUD1-206ENST00000563343 EIF5AL1Q6IS14 154 aaKnown RBP4.42□□□□□ -1.7
HERPUD1-206ENST00000563343 LINC00173Q6ZV60 143 aa4.42□□□□□ -1.7
HERPUD1-206ENST00000563343 SLC51BQ86UW2 128 aa4.42□□□□□ -1.7
HERPUD1-206ENST00000563343 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
HERPUD1-206ENST00000563343 PPDPFQ9H3Y8 114 aa4.42□□□□□ -1.7
HERPUD1-206ENST00000563343 CDC42SE2Q9NRR3 84 aa4.42□□□□□ -1.7
HERPUD1-206ENST00000563343 MRPL35Q9NZE8 188 aaKnown RBP4.42□□□□□ -1.7
HERPUD1-206ENST00000563343 COX7A2LO14548 114 aa4.41□□□□□ -1.7
HERPUD1-206ENST00000563343 UBE2BP63146 152 aa4.41□□□□□ -1.7
HERPUD1-206ENST00000563343 Q5BKY6 102 aa4.41□□□□□ -1.7
HERPUD1-206ENST00000563343 C10orf25Q5T742 122 aa4.41□□□□□ -1.7
HERPUD1-206ENST00000563343 UQCC3Q6UW78 93 aa4.41□□□□□ -1.7
HERPUD1-206ENST00000563343 MRPL52Q86TS9 123 aaKnown RBP4.41□□□□□ -1.7
HERPUD1-206ENST00000563343 COMMD7Q86VX2 200 aa4.41□□□□□ -1.7
HERPUD1-206ENST00000563343 RPL39LQ96EH5 51 aaKnown RBP4.41□□□□□ -1.7
HERPUD1-206ENST00000563343 CTDSP1Q9GZU7 261 aa4.41□□□□□ -1.7
HERPUD1-206ENST00000563343 TEX46H3BTG2 121 aa4.4□□□□□ -1.71
HERPUD1-206ENST00000563343 TRGC1P0CF51 173 aa4.4□□□□□ -1.71
HERPUD1-206ENST00000563343 SPAG11BQ08648 103 aa4.4□□□□□ -1.71
HERPUD1-206ENST00000563343 LINC00242Q5T6M2 205 aa4.4□□□□□ -1.71
HERPUD1-206ENST00000563343 BAGE2Q86Y30 109 aa4.4□□□□□ -1.71
HERPUD1-206ENST00000563343 LINC00304Q8N9R0 145 aa4.4□□□□□ -1.71
HERPUD1-206ENST00000563343 BTF3L4Q96K17 158 aa4.4□□□□□ -1.71
HERPUD1-206ENST00000563343 TPPP3Q9BW30 176 aa4.4□□□□□ -1.71
HERPUD1-206ENST00000563343 SMDT1Q9H4I9 107 aa4.4□□□□□ -1.71
HERPUD1-206ENST00000563343 SDHAF1A6NFY7 115 aa4.39□□□□□ -1.71
HERPUD1-206ENST00000563343 PAGE4O60829 102 aa4.39□□□□□ -1.71
HERPUD1-206ENST00000563343 TSHBP01222 138 aa4.39□□□□□ -1.71
HERPUD1-206ENST00000563343 S100A9P06702 114 aaKnown RBP4.39□□□□□ -1.71
HERPUD1-206ENST00000563343 CFC1BP0CG36 223 aa4.39□□□□□ -1.71
HERPUD1-206ENST00000563343 KRTAP10-6P60371 365 aaPredicted RBP4.39□□□□□ -1.71
HERPUD1-206ENST00000563343 CTAG1AP78358 180 aa4.39□□□□□ -1.71
HERPUD1-206ENST00000563343 KRTAP13-3Q3SY46 172 aa4.39□□□□□ -1.71
HERPUD1-206ENST00000563343 CST9LP1Q5W188 147 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms