RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 GAGE12HA6NDE8 117 aa7.86□□□□□ -1.15
NSMCE1-204ENST00000563273 SMAGPQ0VAQ4 97 aa7.86□□□□□ -1.15
NSMCE1-204ENST00000563273 CIRBPQ14011 172 aaKnown RBP7.86□□□□□ -1.15
NSMCE1-204ENST00000563273 C15orf56Q8N910 161 aa7.86□□□□□ -1.15
NSMCE1-204ENST00000563273 CHCHD10Q8WYQ3 142 aaPredicted RBP7.86□□□□□ -1.15
NSMCE1-204ENST00000563273 C20orf78Q9BR46 151 aa7.86□□□□□ -1.15
NSMCE1-204ENST00000563273 IGHV3-64A0A075B6Q5 118 aa7.85□□□□□ -1.15
NSMCE1-204ENST00000563273 F8W036 122 aa7.85□□□□□ -1.15
NSMCE1-204ENST00000563273 TCAPO15273 167 aa7.85□□□□□ -1.15
NSMCE1-204ENST00000563273 SLPIP03973 132 aa7.85□□□□□ -1.15
NSMCE1-204ENST00000563273 MRPL51Q4U2R6 128 aaKnown RBP7.85□□□□□ -1.15
NSMCE1-204ENST00000563273 KIR2DL4Q99706 377 aa7.85□□□□□ -1.15
NSMCE1-204ENST00000563273 CDC42SE2Q9NRR3 84 aa7.85□□□□□ -1.15
NSMCE1-204ENST00000563273 DMBT1Q9UGM3 2413 aaPredicted RBP7.84□□□□□ -1.15
NSMCE1-204ENST00000563273 GVQW2A0A096LPI5 108 aaPredicted RBP7.84□□□□□ -1.15
NSMCE1-204ENST00000563273 LINC00959A0A1B0GUT2 108 aa7.84□□□□□ -1.15
NSMCE1-204ENST00000563273 A0A1B0GXF2 115 aa7.84□□□□□ -1.15
NSMCE1-204ENST00000563273 SMKR1H3BMG3 65 aa7.84□□□□□ -1.15
NSMCE1-204ENST00000563273 CCL25O15444 150 aa7.84□□□□□ -1.15
NSMCE1-204ENST00000563273 FCER1GP30273 86 aa7.84□□□□□ -1.15
NSMCE1-204ENST00000563273 KRTAP10-4P60372 401 aaPredicted RBP7.84□□□□□ -1.15
NSMCE1-204ENST00000563273 HBBP68871 147 aa7.84□□□□□ -1.15
NSMCE1-204ENST00000563273 FOXI1Q12951 378 aa7.84□□□□□ -1.15
NSMCE1-204ENST00000563273 ATP5L2Q7Z4Y8 100 aa7.84□□□□□ -1.15
NSMCE1-204ENST00000563273 IGKV3OR2-268A0A0C4DH90 116 aa7.83□□□□□ -1.16
NSMCE1-204ENST00000563273 PHOX2AO14813 284 aa7.83□□□□□ -1.16
NSMCE1-204ENST00000563273 PPBPP02775 128 aa7.83□□□□□ -1.16
NSMCE1-204ENST00000563273 CAMPP49913 170 aa7.83□□□□□ -1.16
NSMCE1-204ENST00000563273 PNRC1Q12796 327 aaPredicted RBP7.83□□□□□ -1.16
NSMCE1-204ENST00000563273 ZNF664Q8N3J9 261 aa7.83□□□□□ -1.16
NSMCE1-204ENST00000563273 TIMM21Q9BVV7 248 aa7.83□□□□□ -1.16
NSMCE1-204ENST00000563273 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.83□□□□□ -1.16
NSMCE1-204ENST00000563273 CKS2P33552 79 aa7.82□□□□□ -1.16
NSMCE1-204ENST00000563273 RAB14P61106 215 aa7.82□□□□□ -1.16
NSMCE1-204ENST00000563273 SS18Q15532 418 aa7.82□□□□□ -1.16
NSMCE1-204ENST00000563273 CD164L2Q6UWJ8 174 aa7.82□□□□□ -1.16
NSMCE1-204ENST00000563273 TMEM18Q96B42 140 aa7.82□□□□□ -1.16
NSMCE1-204ENST00000563273 FLG2Q5D862 2391 aaPredicted RBP7.82□□□□□ -1.16
NSMCE1-204ENST00000563273 IGHV1-58A0A0C4DH39 117 aa7.81□□□□□ -1.16
NSMCE1-204ENST00000563273 UBE2D4Q9Y2X8 147 aa7.81□□□□□ -1.16
NSMCE1-204ENST00000563273 HERC1Q15751 4861 aa7.8□□□□□ -1.16
NSMCE1-204ENST00000563273 KRTAP29-1A8MX34 341 aaPredicted RBP7.8□□□□□ -1.16
NSMCE1-204ENST00000563273 C1orf196B1AJZ1 125 aa7.8□□□□□ -1.16
NSMCE1-204ENST00000563273 PANO1I0J062 215 aa7.8□□□□□ -1.16
NSMCE1-204ENST00000563273 TNFRSF6BO95407 300 aa7.8□□□□□ -1.16
NSMCE1-204ENST00000563273 XCL1P47992 114 aa7.8□□□□□ -1.16
NSMCE1-204ENST00000563273 MRPL54Q6P161 138 aaKnown RBP7.8□□□□□ -1.16
NSMCE1-204ENST00000563273 SPACA4Q8TDM5 124 aa7.8□□□□□ -1.16
NSMCE1-204ENST00000563273 ANAPC16Q96DE5 110 aa7.8□□□□□ -1.16
NSMCE1-204ENST00000563273 SMIM2Q9BVW6 85 aa7.8□□□□□ -1.16
NSMCE1-204ENST00000563273 PKIGQ9Y2B9 76 aa7.8□□□□□ -1.16
NSMCE1-204ENST00000563273 D6R8Y8 96 aa7.79□□□□□ -1.16
NSMCE1-204ENST00000563273 HIGD2BQ4VC39 106 aa7.79□□□□□ -1.16
NSMCE1-204ENST00000563273 CLLU1Q5K131 121 aa7.79□□□□□ -1.16
NSMCE1-204ENST00000563273 MT-ND4LP03901 98 aa7.78□□□□□ -1.16
NSMCE1-204ENST00000563273 RPL37AP61513 92 aaKnown RBP7.78□□□□□ -1.16
NSMCE1-204ENST00000563273 ORMDL3Q8N138 153 aa7.78□□□□□ -1.16
NSMCE1-204ENST00000563273 PLAC8Q9NZF1 115 aa7.78□□□□□ -1.16
NSMCE1-204ENST00000563273 LAMTOR2Q9Y2Q5 125 aa7.78□□□□□ -1.16
NSMCE1-204ENST00000563273 PRSS47A8MTI9 375 aa7.77□□□□□ -1.17
NSMCE1-204ENST00000563273 NPYP01303 97 aa7.77□□□□□ -1.17
NSMCE1-204ENST00000563273 MRPS36P82909 103 aaKnown RBP7.77□□□□□ -1.17
NSMCE1-204ENST00000563273 SPANXA1Q9NS26 97 aa7.77□□□□□ -1.17
NSMCE1-204ENST00000563273 LINC00474Q9P2X8 69 aa7.77□□□□□ -1.17
NSMCE1-204ENST00000563273 A0A087WYN8 130 aa7.76□□□□□ -1.17
NSMCE1-204ENST00000563273 COX7A2LO14548 114 aa7.76□□□□□ -1.17
NSMCE1-204ENST00000563273 OXTP01178 125 aa7.76□□□□□ -1.17
NSMCE1-204ENST00000563273 COX6A2Q02221 97 aa7.76□□□□□ -1.17
NSMCE1-204ENST00000563273 TMEM136Q6ZRR5 245 aa7.76□□□□□ -1.17
NSMCE1-204ENST00000563273 Q6ZUT4 128 aa7.76□□□□□ -1.17
NSMCE1-204ENST00000563273 J3QL48 77 aa7.75□□□□□ -1.17
NSMCE1-204ENST00000563273 ZNF561-AS1K7EIQ3 104 aa7.75□□□□□ -1.17
NSMCE1-204ENST00000563273 CHTF8P0CG12 524 aa7.75□□□□□ -1.17
NSMCE1-204ENST00000563273 UQCC3Q6UW78 93 aa7.75□□□□□ -1.17
NSMCE1-204ENST00000563273 PRSS3P2Q8NHM4 247 aa7.75□□□□□ -1.17
NSMCE1-204ENST00000563273 PRELID3AQ96N28 172 aa7.75□□□□□ -1.17
NSMCE1-204ENST00000563273 TRAV13-1A0A0B4J241 112 aa7.74□□□□□ -1.17
NSMCE1-204ENST00000563273 FAM104AQ969W3 186 aa7.74□□□□□ -1.17
NSMCE1-204ENST00000563273 DPH3Q96FX2 82 aa7.74□□□□□ -1.17
NSMCE1-204ENST00000563273 CARD19Q96LW7 228 aa7.74□□□□□ -1.17
NSMCE1-204ENST00000563273 IMMP2LQ96T52 175 aa7.74□□□□□ -1.17
NSMCE1-204ENST00000563273 PYGO1Q9Y3Y4 419 aa7.74□□□□□ -1.17
NSMCE1-204ENST00000563273 APOMO95445 188 aa7.73□□□□□ -1.17
NSMCE1-204ENST00000563273 RAB5AP20339 215 aa7.73□□□□□ -1.17
NSMCE1-204ENST00000563273 MALP21145 153 aa7.73□□□□□ -1.17
NSMCE1-204ENST00000563273 RPL39P62891 51 aaKnown RBP7.73□□□□□ -1.17
NSMCE1-204ENST00000563273 SYCNQ0VAF6 134 aa7.73□□□□□ -1.17
NSMCE1-204ENST00000563273 C2orf48Q96LS8 159 aa7.73□□□□□ -1.17
NSMCE1-204ENST00000563273 F8WDY8 70 aa7.72□□□□□ -1.17
NSMCE1-204ENST00000563273 K7EMI3 77 aa7.72□□□□□ -1.17
NSMCE1-204ENST00000563273 RNASE13Q5GAN3 156 aaKnown RBP7.72□□□□□ -1.17
NSMCE1-204ENST00000563273 C7orf33Q8WU49 177 aa7.72□□□□□ -1.17
NSMCE1-204ENST00000563273 KRTAP3-3Q9BYR6 98 aa7.72□□□□□ -1.17
NSMCE1-204ENST00000563273 KRTAP3-2Q9BYR7 98 aa7.72□□□□□ -1.17
NSMCE1-204ENST00000563273 A0A096LNI7 61 aa7.71□□□□□ -1.18
NSMCE1-204ENST00000563273 IGHV3OR16-9A0A0B4J2B5 98 aa7.71□□□□□ -1.18
NSMCE1-204ENST00000563273 TMEM218A2RU14 115 aa7.71□□□□□ -1.18
NSMCE1-204ENST00000563273 IFI27P40305 119 aaPredicted RBP7.71□□□□□ -1.18
NSMCE1-204ENST00000563273 MAJINQ3KP22 176 aa7.71□□□□□ -1.18
NSMCE1-204ENST00000563273 OR10D4PQ8NGN7 298 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms