RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 ICE1Q9Y2F5 2266 aa5.34□□□□□ -1.55
CDH1-203ENST00000561751 CACNA1DQ01668 2161 aa5.34□□□□□ -1.55
CDH1-203ENST00000561751 DOCK10Q96BY6 2186 aa5.34□□□□□ -1.55
CDH1-203ENST00000561751 IGLV4-3A0A075B6K6 122 aa5.34□□□□□ -1.55
CDH1-203ENST00000561751 TRAV13-2A0A0B4J235 113 aa5.34□□□□□ -1.55
CDH1-203ENST00000561751 SOCS3O14543 225 aa5.34□□□□□ -1.55
CDH1-203ENST00000561751 ADAMTSL4-AS1Q5T5F5 129 aa5.34□□□□□ -1.55
CDH1-203ENST00000561751 RNF152Q8N8N0 203 aa5.34□□□□□ -1.55
CDH1-203ENST00000561751 FDCSPQ8NFU4 85 aa5.34□□□□□ -1.55
CDH1-203ENST00000561751 C10orf105Q8TEF2 133 aa5.34□□□□□ -1.55
CDH1-203ENST00000561751 ZNRD1Q9P1U0 126 aa5.34□□□□□ -1.55
CDH1-203ENST00000561751 SPRR3Q9UBC9 169 aa5.34□□□□□ -1.55
CDH1-203ENST00000561751 FBN2P35556 2912 aa5.34□□□□□ -1.55
CDH1-203ENST00000561751 ITPR3Q14573 2671 aa5.33□□□□□ -1.56
CDH1-203ENST00000561751 IGLV5-45A0A087WSX0 123 aa5.33□□□□□ -1.56
CDH1-203ENST00000561751 TMEM178BH3BS89 294 aa5.33□□□□□ -1.56
CDH1-203ENST00000561751 H7BZZ5 65 aa5.33□□□□□ -1.56
CDH1-203ENST00000561751 SPRY2O43597 315 aa5.33□□□□□ -1.56
CDH1-203ENST00000561751 MGPP08493 103 aa5.33□□□□□ -1.56
CDH1-203ENST00000561751 LOXP28300 417 aaPredicted RBP5.33□□□□□ -1.56
CDH1-203ENST00000561751 FAM19A3Q7Z5A8 133 aa5.33□□□□□ -1.56
CDH1-203ENST00000561751 ZFAND2AQ8N6M9 145 aa5.33□□□□□ -1.56
CDH1-203ENST00000561751 LINC00308Q8TCZ7 52 aa5.33□□□□□ -1.56
CDH1-203ENST00000561751 ITLN2Q8WWU7 325 aaPredicted RBP5.33□□□□□ -1.56
CDH1-203ENST00000561751 A0A0J9YXV3 536 aa5.32□□□□□ -1.56
CDH1-203ENST00000561751 JMJD7-PLA2G4BH0Y9G9 81 aa5.32□□□□□ -1.56
CDH1-203ENST00000561751 M0R1W7 72 aa5.32□□□□□ -1.56
CDH1-203ENST00000561751 ERC2-IT1O76042 136 aa5.32□□□□□ -1.56
CDH1-203ENST00000561751 PLA2G1BP04054 148 aaKnown RBP5.32□□□□□ -1.56
CDH1-203ENST00000561751 CCKP06307 115 aa5.32□□□□□ -1.56
CDH1-203ENST00000561751 RNASE3P12724 160 aaKnown RBP5.32□□□□□ -1.56
CDH1-203ENST00000561751 RPL39P62891 51 aaKnown RBP5.32□□□□□ -1.56
CDH1-203ENST00000561751 SUMO4Q6EEV6 95 aa5.32□□□□□ -1.56
CDH1-203ENST00000561751 DEFB108BQ8NET1 73 aa5.32□□□□□ -1.56
CDH1-203ENST00000561751 POLQO75417 2590 aa5.32□□□□□ -1.56
CDH1-203ENST00000561751 TNCP24821 2201 aa5.31□□□□□ -1.56
CDH1-203ENST00000561751 FAM223BA6NKX1 122 aa5.31□□□□□ -1.56
CDH1-203ENST00000561751 M0QY20 66 aa5.31□□□□□ -1.56
CDH1-203ENST00000561751 SLURP1P55000 103 aa5.31□□□□□ -1.56
CDH1-203ENST00000561751 PIK3CD-AS1Q5SR53 167 aa5.31□□□□□ -1.56
CDH1-203ENST00000561751 IGFL3Q6UXB1 125 aa5.31□□□□□ -1.56
CDH1-203ENST00000561751 SVILO95425 2214 aa5.31□□□□□ -1.56
CDH1-203ENST00000561751 MED12Q93074 2177 aa5.31□□□□□ -1.56
CDH1-203ENST00000561751 SETD2Q9BYW2 2564 aaPredicted RBP5.3□□□□□ -1.56
CDH1-203ENST00000561751 IGLV5-39A0A0G2JS06 123 aa5.3□□□□□ -1.56
CDH1-203ENST00000561751 TRBV7-6A0A0J9YX20 115 aa5.3□□□□□ -1.56
CDH1-203ENST00000561751 IGFL2Q6UWQ7 119 aa5.3□□□□□ -1.56
CDH1-203ENST00000561751 Q6ZRU5 148 aa5.3□□□□□ -1.56
CDH1-203ENST00000561751 FP248Q71RG6 208 aaPredicted RBP5.3□□□□□ -1.56
CDH1-203ENST00000561751 VMO1Q7Z5L0 202 aa5.3□□□□□ -1.56
CDH1-203ENST00000561751 C16orf92Q96LL3 132 aa5.3□□□□□ -1.56
CDH1-203ENST00000561751 KRTAP17-1Q9BYP8 105 aa5.3□□□□□ -1.56
CDH1-203ENST00000561751 LINC00846Q9NV44 126 aa5.3□□□□□ -1.56
CDH1-203ENST00000561751 CSMD1Q96PZ7 3565 aa5.3□□□□□ -1.56
CDH1-203ENST00000561751 SPENQ96T58 3664 aaKnown RBP5.3□□□□□ -1.56
CDH1-203ENST00000561751 OTOGQ6ZRI0 2925 aa5.29□□□□□ -1.56
CDH1-203ENST00000561751 CLPSL1A2RUU4 121 aa5.29□□□□□ -1.56
CDH1-203ENST00000561751 IBA57-AS1B1ANH7 110 aa5.29□□□□□ -1.56
CDH1-203ENST00000561751 PRR15Q8IV56 129 aa5.29□□□□□ -1.56
CDH1-203ENST00000561751 HES7Q9BYE0 225 aa5.29□□□□□ -1.56
CDH1-203ENST00000561751 DEFB127Q9H1M4 99 aa5.29□□□□□ -1.56
CDH1-203ENST00000561751 DPM3Q9P2X0 92 aa5.29□□□□□ -1.56
CDH1-203ENST00000561751 MTORP42345 2549 aa5.29□□□□□ -1.56
CDH1-203ENST00000561751 POLEQ07864 2286 aa5.28□□□□□ -1.56
CDH1-203ENST00000561751 F8P00451 2351 aa5.28□□□□□ -1.56
CDH1-203ENST00000561751 FREM1Q5H8C1 2179 aa5.28□□□□□ -1.56
CDH1-203ENST00000561751 NF1P21359 2839 aa5.28□□□□□ -1.56
CDH1-203ENST00000561751 IGHV3-72A0A0B4J1Y9 119 aa5.28□□□□□ -1.56
CDH1-203ENST00000561751 KLLNB2CW77 178 aa5.28□□□□□ -1.56
CDH1-203ENST00000561751 H3BQ85 93 aa5.28□□□□□ -1.56
CDH1-203ENST00000561751 M0R1B8 84 aa5.28□□□□□ -1.56
CDH1-203ENST00000561751 IGFL4Q6B9Z1 124 aa5.28□□□□□ -1.56
CDH1-203ENST00000561751 Q8N2B8 174 aa5.28□□□□□ -1.56
CDH1-203ENST00000561751 CNEP1R1Q8N9A8 125 aa5.28□□□□□ -1.56
CDH1-203ENST00000561751 LINC00167Q96N53 147 aa5.28□□□□□ -1.56
CDH1-203ENST00000561751 PKIGQ9Y2B9 76 aa5.28□□□□□ -1.56
CDH1-203ENST00000561751 IGKV3D-7A0A0C4DH55 119 aa5.27□□□□□ -1.57
CDH1-203ENST00000561751 PLAC8L1A1L4L8 177 aa5.27□□□□□ -1.57
CDH1-203ENST00000561751 APELAP0DMC3 54 aa5.27□□□□□ -1.57
CDH1-203ENST00000561751 CD164Q04900 197 aa5.27□□□□□ -1.57
CDH1-203ENST00000561751 PMAIP1Q13794 54 aa5.27□□□□□ -1.57
CDH1-203ENST00000561751 PRR9Q5T870 116 aa5.27□□□□□ -1.57
CDH1-203ENST00000561751 C20orf197Q8N268 126 aa5.27□□□□□ -1.57
CDH1-203ENST00000561751 Q8N6K4 173 aa5.27□□□□□ -1.57
CDH1-203ENST00000561751 Q8NA96 180 aa5.27□□□□□ -1.57
CDH1-203ENST00000561751 C9orf106Q8NAJ2 232 aa5.27□□□□□ -1.57
CDH1-203ENST00000561751 CELSR2Q9HCU4 2923 aa5.27□□□□□ -1.57
CDH1-203ENST00000561751 ZGRF1Q86YA3 2104 aa5.27□□□□□ -1.57
CDH1-203ENST00000561751 PRR14LQ5THK1 2151 aa5.26□□□□□ -1.57
CDH1-203ENST00000561751 F5H697 171 aa5.26□□□□□ -1.57
CDH1-203ENST00000561751 TRBV12-3P01733 135 aa5.26□□□□□ -1.57
CDH1-203ENST00000561751 CD28P10747 220 aa5.26□□□□□ -1.57
CDH1-203ENST00000561751 RPL11P62913 178 aaKnown RBP5.26□□□□□ -1.57
CDH1-203ENST00000561751 BLCAPP62952 87 aa5.26□□□□□ -1.57
CDH1-203ENST00000561751 FAM223AQ8IWN6 122 aa5.26□□□□□ -1.57
CDH1-203ENST00000561751 UBL5Q9BZL1 73 aa5.26□□□□□ -1.57
CDH1-203ENST00000561751 DSCAMO60469 2012 aa5.26□□□□□ -1.57
CDH1-203ENST00000561751 HIVEP3Q5T1R4 2406 aa5.25□□□□□ -1.57
CDH1-203ENST00000561751 A0A1W2PRX2 142 aa5.25□□□□□ -1.57
CDH1-203ENST00000561751 GNRH2O43555 120 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms