RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 TSHBP01222 138 aa13.39□□□□□ -0.27
TPM1-232ENST00000561425 PMCHP20382 165 aa13.39□□□□□ -0.27
TPM1-232ENST00000561425 COX19Q49B96 90 aa13.39□□□□□ -0.27
TPM1-232ENST00000561425 TRBV24-1A0A075B6N3 115 aa13.38□□□□□ -0.27
TPM1-232ENST00000561425 FAM229AH3BQW9 127 aa13.38□□□□□ -0.27
TPM1-232ENST00000561425 NRACQ8N912 160 aa13.38□□□□□ -0.27
TPM1-232ENST00000561425 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.37□□□□□ -0.27
TPM1-232ENST00000561425 IGKV2-29A2NJV5 120 aaPredicted RBP13.37□□□□□ -0.27
TPM1-232ENST00000561425 FGF6P10767 208 aa13.37□□□□□ -0.27
TPM1-232ENST00000561425 FAM104BQ5XKR9 115 aa13.37□□□□□ -0.27
TPM1-232ENST00000561425 C9orf163Q8N9P6 203 aa13.37□□□□□ -0.27
TPM1-232ENST00000561425 PPP1R17O96001 155 aa13.36□□□□□ -0.27
TPM1-232ENST00000561425 INAFM2P0DMQ5 153 aa13.36□□□□□ -0.27
TPM1-232ENST00000561425 ZNF25P17030 456 aaPredicted RBP13.36□□□□□ -0.27
TPM1-232ENST00000561425 YPEL4Q96NS1 127 aa13.36□□□□□ -0.27
TPM1-232ENST00000561425 CHAC1Q9BUX1 264 aa13.36□□□□□ -0.27
TPM1-232ENST00000561425 AMMECR1LQ6DCA0 310 aa13.35□□□□□ -0.27
TPM1-232ENST00000561425 TMEM136Q6ZRR5 245 aa13.35□□□□□ -0.27
TPM1-232ENST00000561425 SCXQ7RTU7 201 aa13.35□□□□□ -0.27
TPM1-232ENST00000561425 VCYO14598 125 aa13.34□□□□□ -0.27
TPM1-232ENST00000561425 CNBPP62633 177 aaKnown RBP13.34□□□□□ -0.27
TPM1-232ENST00000561425 MRPL51Q4U2R6 128 aaKnown RBP13.34□□□□□ -0.27
TPM1-232ENST00000561425 MRPL52Q86TS9 123 aaKnown RBP13.34□□□□□ -0.27
TPM1-232ENST00000561425 GNB1LQ9BYB4 327 aa13.34□□□□□ -0.27
TPM1-232ENST00000561425 SMKR1H3BMG3 65 aa13.33□□□□□ -0.28
TPM1-232ENST00000561425 MT-ND6P03923 174 aa13.33□□□□□ -0.28
TPM1-232ENST00000561425 RNASEKQ6P5S7 137 aaKnown RBP13.33□□□□□ -0.28
TPM1-232ENST00000561425 SLPIP03973 132 aa13.32□□□□□ -0.28
TPM1-232ENST00000561425 SUMO2P61956 95 aaKnown RBP13.32□□□□□ -0.28
TPM1-232ENST00000561425 OR5A1Q8NGJ0 315 aa13.32□□□□□ -0.28
TPM1-232ENST00000561425 CIRBP-AS1Q8TBR5 109 aa13.32□□□□□ -0.28
TPM1-232ENST00000561425 SDIM1Q6ZPB5 146 aa13.31□□□□□ -0.28
TPM1-232ENST00000561425 GAGE12HA6NDE8 117 aa13.3□□□□□ -0.28
TPM1-232ENST00000561425 CKS2P33552 79 aa13.3□□□□□ -0.28
TPM1-232ENST00000561425 RPL32P62910 135 aaKnown RBP13.3□□□□□ -0.28
TPM1-232ENST00000561425 C15orf56Q8N910 161 aa13.3□□□□□ -0.28
TPM1-232ENST00000561425 CHCHD10Q8WYQ3 142 aaPredicted RBP13.3□□□□□ -0.28
TPM1-232ENST00000561425 C20orf78Q9BR46 151 aa13.3□□□□□ -0.28
TPM1-232ENST00000561425 CDC42SE2Q9NRR3 84 aa13.3□□□□□ -0.28
TPM1-232ENST00000561425 PPBPP02775 128 aa13.29□□□□□ -0.28
TPM1-232ENST00000561425 LINC00528Q8N1L1 170 aa13.29□□□□□ -0.28
TPM1-232ENST00000561425 MRPL18Q9H0U6 180 aaKnown RBP13.29□□□□□ -0.28
TPM1-232ENST00000561425 CSDC2Q9Y534 153 aaKnown RBP13.29□□□□□ -0.28
TPM1-232ENST00000561425 TRAPPC1Q9Y5R8 145 aa13.29□□□□□ -0.28
TPM1-232ENST00000561425 COLCA2A8K830 154 aa13.28□□□□□ -0.28
TPM1-232ENST00000561425 D6R8Y8 96 aa13.28□□□□□ -0.28
TPM1-232ENST00000561425 ORMDL3Q8N138 153 aa13.28□□□□□ -0.28
TPM1-232ENST00000561425 TMEM101Q96IK0 257 aa13.28□□□□□ -0.28
TPM1-232ENST00000561425 IGKV3OR2-268A0A0C4DH90 116 aa13.27□□□□□ -0.29
TPM1-232ENST00000561425 LINC00959A0A1B0GUT2 108 aa13.27□□□□□ -0.29
TPM1-232ENST00000561425 hDV102S1A0JD36 115 aa13.27□□□□□ -0.29
TPM1-232ENST00000561425 FABP9Q0Z7S8 132 aa13.27□□□□□ -0.29
TPM1-232ENST00000561425 FOXI1Q12951 378 aa13.27□□□□□ -0.29
TPM1-232ENST00000561425 CFAP161Q6P656 301 aa13.27□□□□□ -0.29
TPM1-232ENST00000561425 PLA2G1BP04054 148 aaKnown RBP13.26□□□□□ -0.29
TPM1-232ENST00000561425 KRTAP10-4P60372 401 aaPredicted RBP13.26□□□□□ -0.29
TPM1-232ENST00000561425 CIRBPQ14011 172 aaKnown RBP13.26□□□□□ -0.29
TPM1-232ENST00000561425 ZNF664Q8N3J9 261 aa13.26□□□□□ -0.29
TPM1-232ENST00000561425 SRRM2Q9UQ35 2752 aaKnown RBP13.25□□□□□ -0.29
TPM1-232ENST00000561425 RAB5AP20339 215 aa13.25□□□□□ -0.29
TPM1-232ENST00000561425 KIAA1644Q3SXP7 199 aa13.25□□□□□ -0.29
TPM1-232ENST00000561425 PRELID3AQ96N28 172 aa13.25□□□□□ -0.29
TPM1-232ENST00000561425 KIR2DL4Q99706 377 aa13.25□□□□□ -0.29
TPM1-232ENST00000561425 PHOX2AO14813 284 aa13.24□□□□□ -0.29
TPM1-232ENST00000561425 TNFRSF6BO95407 300 aa13.24□□□□□ -0.29
TPM1-232ENST00000561425 FCER1GP30273 86 aa13.24□□□□□ -0.29
TPM1-232ENST00000561425 AP5S1Q9NUS5 200 aa13.24□□□□□ -0.29
TPM1-232ENST00000561425 UBE2D4Q9Y2X8 147 aa13.24□□□□□ -0.29
TPM1-232ENST00000561425 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.24□□□□□ -0.29
TPM1-232ENST00000561425 PANO1I0J062 215 aa13.23□□□□□ -0.29
TPM1-232ENST00000561425 TIMM21Q9BVV7 248 aa13.23□□□□□ -0.29
TPM1-232ENST00000561425 LAMTOR2Q9Y2Q5 125 aa13.23□□□□□ -0.29
TPM1-232ENST00000561425 GVQW2A0A096LPI5 108 aaPredicted RBP13.22□□□□□ -0.29
TPM1-232ENST00000561425 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.22□□□□□ -0.29
TPM1-232ENST00000561425 TCAPO15273 167 aa13.22□□□□□ -0.29
TPM1-232ENST00000561425 NPYP01303 97 aa13.22□□□□□ -0.29
TPM1-232ENST00000561425 CCL25O15444 150 aa13.21□□□□□ -0.29
TPM1-232ENST00000561425 IGHV3-64A0A075B6Q5 118 aa13.2□□□□□ -0.3
TPM1-232ENST00000561425 SMAGPQ0VAQ4 97 aa13.2□□□□□ -0.3
TPM1-232ENST00000561425 CD164L2Q6UWJ8 174 aa13.2□□□□□ -0.3
TPM1-232ENST00000561425 SMIM2Q9BVW6 85 aa13.2□□□□□ -0.3
TPM1-232ENST00000561425 MAP1LC3AQ9H492 121 aa13.2□□□□□ -0.3
TPM1-232ENST00000561425 PRSS47A8MTI9 375 aa13.19□□□□□ -0.3
TPM1-232ENST00000561425 TRGC2P03986 189 aa13.19□□□□□ -0.3
TPM1-232ENST00000561425 XCL1P47992 114 aa13.19□□□□□ -0.3
TPM1-232ENST00000561425 SS18Q15532 418 aa13.19□□□□□ -0.3
TPM1-232ENST00000561425 FAM104AQ969W3 186 aa13.19□□□□□ -0.3
TPM1-232ENST00000561425 ALKBH7Q9BT30 221 aaPredicted RBP13.19□□□□□ -0.3
TPM1-232ENST00000561425 TMEM18Q96B42 140 aa13.18□□□□□ -0.3
TPM1-232ENST00000561425 HIGD2BQ4VC39 106 aa13.17□□□□□ -0.3
TPM1-232ENST00000561425 FLG2Q5D862 2391 aaPredicted RBP13.17□□□□□ -0.3
TPM1-232ENST00000561425 MYCBP2O75592 4640 aa13.17□□□□□ -0.3
TPM1-232ENST00000561425 IGHV1-58A0A0C4DH39 117 aa13.16□□□□□ -0.3
TPM1-232ENST00000561425 C1orf196B1AJZ1 125 aa13.16□□□□□ -0.3
TPM1-232ENST00000561425 LOC389332A0A1B0GUA5 103 aa13.15□□□□□ -0.3
TPM1-232ENST00000561425 RPL39P62891 51 aaKnown RBP13.14□□□□□ -0.31
TPM1-232ENST00000561425 SPACA4Q8TDM5 124 aa13.14□□□□□ -0.31
TPM1-232ENST00000561425 MRPS36P82909 103 aaKnown RBP13.13□□□□□ -0.31
TPM1-232ENST00000561425 Q6ZUT4 128 aa13.13□□□□□ -0.31
TPM1-232ENST00000561425 SPANXA1Q9NS26 97 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms