RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 IGHV3-66A0A0C4DH42 116 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 KIR2DL5BA0A0G2JN68 375 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 KIR2DL5BA0A0G2JPC4 375 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 LINC01546A6NGU7 62 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 SYS1-DBNDD2H3BUS1 97 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 SNAI2O43623 268 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 ZNF207O43670 478 aaKnown RBP2.23□□□□□ -2.05
SPG11-225ENST00000561391 ATP5LO75964 103 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 OXTP01178 125 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 IGHV3-11P01762 117 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 C3orf79P0CE67 100 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 SMIM17P0DL12 118 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 ERCC8Q13216 396 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 TDRG1Q3Y452 100 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 MRPL51Q4U2R6 128 aaKnown RBP2.23□□□□□ -2.05
SPG11-225ENST00000561391 FAM159AQ6UWV7 190 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 UNQ9165/PRO28630Q6UXU0 137 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 FOXI2Q6ZQN5 318 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 AMN1Q8IY45 258 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 KIR2DL5AQ8N109 375 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 C6orf223Q8N319 242 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 RNF182Q8N6D2 247 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 Q8TAT8 98 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 MYOZ3Q8TDC0 251 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 FAM19A4Q96LR4 140 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 TP53TG1Q9Y2A0 90 aa2.23□□□□□ -2.05
SPG11-225ENST00000561391 MRPS16Q9Y3D3 137 aaKnown RBP2.23□□□□□ -2.05
SPG11-225ENST00000561391 IGHV3OR16-13A0A075B7E8 117 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 IGHV3-49A0A0A0MS15 119 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 IGHV3-74A0A0B4J1X5 117 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 IGHV1-24A0A0C4DH33 117 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 IGHV3-38A0A0C4DH36 116 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 TMEM213A2RRL7 107 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 C2orf70A6NJV1 201 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 KRTAP16-1A8MUX0 517 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 KLLNB2CW77 178 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 D6R8Y8 96 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 H7C1H1 209 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 K7EQG2 157 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 M0R381 172 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 TRBV12-3P01733 135 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 HBDP02042 147 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 FCER1GP30273 86 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 RNASE4P34096 147 aaKnown RBP2.22□□□□□ -2.05
SPG11-225ENST00000561391 IFI27P40305 119 aaPredicted RBP2.22□□□□□ -2.05
SPG11-225ENST00000561391 ZNF80P51504 273 aaPredicted RBP2.22□□□□□ -2.05
SPG11-225ENST00000561391 NDUFV3P56181 108 aaKnown RBP2.22□□□□□ -2.05
SPG11-225ENST00000561391 SYNJ2BPP57105 145 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 KRTAP10-1P60331 282 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 NUTF2P61970 127 aaKnown RBP2.22□□□□□ -2.05
SPG11-225ENST00000561391 RPL32P62910 135 aaKnown RBP2.22□□□□□ -2.05
SPG11-225ENST00000561391 SPATA45Q537H7 98 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 ORMDL2Q53FV1 153 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 LINC01545Q5VT33 79 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 FAM19A2Q8N3H0 131 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 ZFAND2AQ8N6M9 145 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 Q8N8P6 123 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 OR9G4Q8NGQ1 327 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 OR2K2Q8NGT1 345 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 DCANP1Q8TF63 244 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 PTH2Q96A98 100 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 C14orf144Q96I85 54 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 AP1S3Q96PC3 154 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 SPAG8Q99932 426 aaPredicted RBP2.22□□□□□ -2.05
SPG11-225ENST00000561391 C2orf88Q9BSF0 95 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 CHCHD5Q9BSY4 110 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 PRO1933Q9H354 126 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 DPH3P1Q9H4G8 78 aa2.22□□□□□ -2.05
SPG11-225ENST00000561391 IGLV4-3A0A075B6K6 122 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 TRAV10A0A0B4J240 114 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 A0A0J9YX75 114 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 LOC389332A0A1B0GUA5 103 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 C7orf71A4D174 169 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.21□□□□□ -2.06
SPG11-225ENST00000561391 SIVA1O15304 175 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 DLEU1O43261 78 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 IGLC3P0DOY3 106 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 EVI2AP22794 236 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 HLA-DMBP28068 263 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 CDKN1BP46527 198 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 HNRNPA3P51991 378 aaKnown RBP2.21□□□□□ -2.06
SPG11-225ENST00000561391 APOC4P55056 127 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 SSTP61278 116 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 LAGE3Q14657 143 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 COL5A1-AS1Q5SY13 56 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 SLC25A34Q6PIV7 304 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 Q6ZN92 141 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 BOD1L2Q8IYS8 172 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 Q8N976 141 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 C15orf53Q8NAA6 179 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 DYNLRB2Q8TF09 96 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 IFI27L1Q96BM0 104 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 RNF185Q96GF1 192 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 LINC00467Q9BRT7 94 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 GOLT1BQ9Y3E0 138 aa2.21□□□□□ -2.06
SPG11-225ENST00000561391 FAT3Q8TDW7 4589 aa2.2□□□□□ -2.06
SPG11-225ENST00000561391 IGKV3-7A0A075B6H7 116 aa2.2□□□□□ -2.06
SPG11-225ENST00000561391 IGHV1OR15-1A0A075B7D0 117 aa2.2□□□□□ -2.06
SPG11-225ENST00000561391 DEFB131BA0A096LNP1 70 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms