RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 PRR3P79522 188 aaKnown RBP16.98■□□□□ 0.31
SNRPA1-215ENST00000561187 SMIM7Q9BQ49 75 aa16.98■□□□□ 0.31
SNRPA1-215ENST00000561187 ESDP10768 282 aa16.97■□□□□ 0.31
SNRPA1-215ENST00000561187 CT83Q5H943 113 aa16.97■□□□□ 0.31
SNRPA1-215ENST00000561187 AKAP14Q86UN6 197 aa16.97■□□□□ 0.31
SNRPA1-215ENST00000561187 SMKR1H3BMG3 65 aa16.96■□□□□ 0.31
SNRPA1-215ENST00000561187 ODF1Q14990 250 aa16.96■□□□□ 0.31
SNRPA1-215ENST00000561187 AMN1Q8IY45 258 aa16.96■□□□□ 0.31
SNRPA1-215ENST00000561187 CARD19Q96LW7 228 aa16.96■□□□□ 0.31
SNRPA1-215ENST00000561187 IGHV1-58A0A0C4DH39 117 aa16.95■□□□□ 0.3
SNRPA1-215ENST00000561187 A0A1B0GUT8 65 aa16.95■□□□□ 0.3
SNRPA1-215ENST00000561187 EIF5A2Q9GZV4 153 aaKnown RBP16.95■□□□□ 0.3
SNRPA1-215ENST00000561187 LINC01551Q86U37 167 aa16.94■□□□□ 0.3
SNRPA1-215ENST00000561187 TSKUQ8WUA8 353 aa16.94■□□□□ 0.3
SNRPA1-215ENST00000561187 SS18Q15532 418 aa16.93■□□□□ 0.3
SNRPA1-215ENST00000561187 TMEM191AQ9H0A3 160 aa16.93■□□□□ 0.3
SNRPA1-215ENST00000561187 C7orf77A4D0Y5 90 aa16.92■□□□□ 0.3
SNRPA1-215ENST00000561187 RAB4AP20338 218 aa16.92■□□□□ 0.3
SNRPA1-215ENST00000561187 RNASE13Q5GAN3 156 aaKnown RBP16.92■□□□□ 0.3
SNRPA1-215ENST00000561187 CDC42SE2Q9NRR3 84 aa16.92■□□□□ 0.3
SNRPA1-215ENST00000561187 POLR2KP53803 58 aaKnown RBP16.91■□□□□ 0.3
SNRPA1-215ENST00000561187 ZNF727A8MUV8 499 aa16.9■□□□□ 0.3
SNRPA1-215ENST00000561187 ZNF664Q8N3J9 261 aa16.9■□□□□ 0.3
SNRPA1-215ENST00000561187 ZNF561-AS1K7EIQ3 104 aa16.89■□□□□ 0.29
SNRPA1-215ENST00000561187 FCER1GP30273 86 aa16.89■□□□□ 0.29
SNRPA1-215ENST00000561187 CD164L2Q6UWJ8 174 aa16.89■□□□□ 0.29
SNRPA1-215ENST00000561187 LRP2P98164 4655 aa16.89■□□□□ 0.29
SNRPA1-215ENST00000561187 TRBV27A0A0K0K1C4 114 aa16.88■□□□□ 0.29
SNRPA1-215ENST00000561187 SYCNQ0VAF6 134 aa16.88■□□□□ 0.29
SNRPA1-215ENST00000561187 MRPL52Q86TS9 123 aaKnown RBP16.88■□□□□ 0.29
SNRPA1-215ENST00000561187 OSTCQ9NRP0 149 aa16.87■□□□□ 0.29
SNRPA1-215ENST00000561187 CAMPP49913 170 aa16.86■□□□□ 0.29
SNRPA1-215ENST00000561187 LINC00474Q9P2X8 69 aa16.86■□□□□ 0.29
SNRPA1-215ENST00000561187 SRP19P09132 144 aaKnown RBP16.85■□□□□ 0.29
SNRPA1-215ENST00000561187 MALP21145 153 aa16.85■□□□□ 0.29
SNRPA1-215ENST00000561187 GAGE2BQ13066 116 aa16.85■□□□□ 0.29
SNRPA1-215ENST00000561187 NUP35Q8NFH5 326 aa16.85■□□□□ 0.29
SNRPA1-215ENST00000561187 FAM210AQ96ND0 272 aa16.85■□□□□ 0.29
SNRPA1-215ENST00000561187 V9GYV3 84 aa16.85■□□□□ 0.29
SNRPA1-215ENST00000561187 IGLV4-69A0A075B6H9 119 aa16.84■□□□□ 0.29
SNRPA1-215ENST00000561187 RIGQ13278 110 aa16.84■□□□□ 0.29
SNRPA1-215ENST00000561187 TRAV13-1A0A0B4J241 112 aa16.83■□□□□ 0.28
SNRPA1-215ENST00000561187 NRACQ8N912 160 aa16.83■□□□□ 0.28
SNRPA1-215ENST00000561187 LINC01600Q96MT4 127 aa16.83■□□□□ 0.28
SNRPA1-215ENST00000561187 PKIGQ9Y2B9 76 aa16.83■□□□□ 0.28
SNRPA1-215ENST00000561187 VCYO14598 125 aa16.82■□□□□ 0.28
SNRPA1-215ENST00000561187 Q6ZUT4 128 aa16.82■□□□□ 0.28
SNRPA1-215ENST00000561187 UBE2D4Q9Y2X8 147 aa16.82■□□□□ 0.28
SNRPA1-215ENST00000561187 COX7A2LO14548 114 aa16.81■□□□□ 0.28
SNRPA1-215ENST00000561187 PTTG1IPP53801 180 aa16.81■□□□□ 0.28
SNRPA1-215ENST00000561187 SUMO2P61956 95 aaKnown RBP16.81■□□□□ 0.28
SNRPA1-215ENST00000561187 ISOC2Q96AB3 205 aa16.8■□□□□ 0.28
SNRPA1-215ENST00000561187 C5orf38Q86SI9 138 aa16.79■□□□□ 0.28
SNRPA1-215ENST00000561187 CAMK2N2Q96S95 79 aa16.79■□□□□ 0.28
SNRPA1-215ENST00000561187 LOC107984640A0A0U1RRK4 108 aa16.78■□□□□ 0.28
SNRPA1-215ENST00000561187 C1orf196B1AJZ1 125 aa16.78■□□□□ 0.28
SNRPA1-215ENST00000561187 ADIRFQ15847 76 aa16.78■□□□□ 0.28
SNRPA1-215ENST00000561187 KIR2DL4Q99706 377 aa16.78■□□□□ 0.28
SNRPA1-215ENST00000561187 MRPL51Q4U2R6 128 aaKnown RBP16.77■□□□□ 0.28
SNRPA1-215ENST00000561187 Q6ZRP5 223 aa16.77■□□□□ 0.28
SNRPA1-215ENST00000561187 RPL23P62829 140 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-215ENST00000561187 RPL18AQ02543 176 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-215ENST00000561187 SPINK6Q6UWN8 80 aa16.76■□□□□ 0.27
SNRPA1-215ENST00000561187 NAT8BQ9UHF3 227 aa16.76■□□□□ 0.27
SNRPA1-215ENST00000561187 A0A0J9YXV3 536 aa16.75■□□□□ 0.27
SNRPA1-215ENST00000561187 A0A1W2PNN7 141 aa16.74■□□□□ 0.27
SNRPA1-215ENST00000561187 PPP1R17O96001 155 aa16.74■□□□□ 0.27
SNRPA1-215ENST00000561187 TMEM241Q24JQ0 296 aa16.74■□□□□ 0.27
SNRPA1-215ENST00000561187 FAM104BQ5XKR9 115 aa16.74■□□□□ 0.27
SNRPA1-215ENST00000561187 REG3GQ6UW15 175 aa16.74■□□□□ 0.27
SNRPA1-215ENST00000561187 RPL39P62891 51 aaKnown RBP16.73■□□□□ 0.27
SNRPA1-215ENST00000561187 SPAG11BQ08648 103 aa16.73■□□□□ 0.27
SNRPA1-215ENST00000561187 SMAGPQ0VAQ4 97 aa16.73■□□□□ 0.27
SNRPA1-215ENST00000561187 OPRPNQ99935 248 aaPredicted RBP16.73■□□□□ 0.27
SNRPA1-215ENST00000561187 CSDC2Q9Y534 153 aaKnown RBP16.73■□□□□ 0.27
SNRPA1-215ENST00000561187 PPP1R2P9O14990 202 aa16.72■□□□□ 0.27
SNRPA1-215ENST00000561187 APOMO95445 188 aa16.72■□□□□ 0.27
SNRPA1-215ENST00000561187 C9JQL5 133 aa16.71■□□□□ 0.27
SNRPA1-215ENST00000561187 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.71■□□□□ 0.27
SNRPA1-215ENST00000561187 FAM74A3Q4VXF1 159 aa16.7■□□□□ 0.26
SNRPA1-215ENST00000561187 RNF213Q63HN8 5207 aa16.7■□□□□ 0.26
SNRPA1-215ENST00000561187 CKS2P33552 79 aa16.69■□□□□ 0.26
SNRPA1-215ENST00000561187 SRSF9Q13242 221 aaKnown RBP eCLIP16.69■□□□□ 0.26
SNRPA1-215ENST00000561187 C9orf116Q5BN46 136 aaPredicted RBP16.69■□□□□ 0.26
SNRPA1-215ENST00000561187 TMEM18Q96B42 140 aa16.69■□□□□ 0.26
SNRPA1-215ENST00000561187 SRSF3P84103 164 aaKnown RBP16.68■□□□□ 0.26
SNRPA1-215ENST00000561187 MRPL54Q6P161 138 aaKnown RBP16.68■□□□□ 0.26
SNRPA1-215ENST00000561187 SMIM27A0A1W2PRY6 76 aa16.67■□□□□ 0.26
SNRPA1-215ENST00000561187 PHF5AQ7RTV0 110 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-215ENST00000561187 C2orf48Q96LS8 159 aa16.67■□□□□ 0.26
SNRPA1-215ENST00000561187 NAT8Q9UHE5 227 aa16.67■□□□□ 0.26
SNRPA1-215ENST00000561187 D6R8Y8 96 aa16.66■□□□□ 0.26
SNRPA1-215ENST00000561187 TNFRSF6BO95407 300 aa16.66■□□□□ 0.26
SNRPA1-215ENST00000561187 KRTAP10-8P60410 259 aa16.66■□□□□ 0.26
SNRPA1-215ENST00000561187 ORAOV1Q8WV07 137 aa16.66■□□□□ 0.26
SNRPA1-215ENST00000561187 TIMM21Q9BVV7 248 aa16.66■□□□□ 0.26
SNRPA1-215ENST00000561187 MT-ND6P03923 174 aa16.65■□□□□ 0.26
SNRPA1-215ENST00000561187 C20orf78Q9BR46 151 aa16.65■□□□□ 0.26
SNRPA1-215ENST00000561187 SMIM2Q9BVW6 85 aa16.65■□□□□ 0.26
SNRPA1-215ENST00000561187 PSORS1C2Q9UIG4 136 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms