RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 PHOX2AO14813 284 aa10.38□□□□□ -0.75
LMX1B-204ENST00000561065 IGLV10-54A0A075B6I4 117 aa10.37□□□□□ -0.75
LMX1B-204ENST00000561065 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.37□□□□□ -0.75
LMX1B-204ENST00000561065 IGKV2-29A2NJV5 120 aaPredicted RBP10.37□□□□□ -0.75
LMX1B-204ENST00000561065 TSHBP01222 138 aa10.37□□□□□ -0.75
LMX1B-204ENST00000561065 ESDP10768 282 aa10.37□□□□□ -0.75
LMX1B-204ENST00000561065 RPL32P62910 135 aaKnown RBP10.37□□□□□ -0.75
LMX1B-204ENST00000561065 LINC00528Q8N1L1 170 aa10.37□□□□□ -0.75
LMX1B-204ENST00000561065 TMEM242Q9NWH2 141 aa10.37□□□□□ -0.75
LMX1B-204ENST00000561065 FAT3Q8TDW7 4589 aa10.36□□□□□ -0.75
LMX1B-204ENST00000561065 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.36□□□□□ -0.75
LMX1B-204ENST00000561065 CCL25O15444 150 aa10.36□□□□□ -0.75
LMX1B-204ENST00000561065 RPS10P46783 165 aaKnown RBP10.36□□□□□ -0.75
LMX1B-204ENST00000561065 LRP1Q07954 4544 aaKnown RBP10.36□□□□□ -0.75
LMX1B-204ENST00000561065 SMKR1H3BMG3 65 aa10.35□□□□□ -0.75
LMX1B-204ENST00000561065 SS18Q15532 418 aa10.35□□□□□ -0.75
LMX1B-204ENST00000561065 MRPL52Q86TS9 123 aaKnown RBP10.35□□□□□ -0.75
LMX1B-204ENST00000561065 ORMDL3Q8N138 153 aa10.35□□□□□ -0.75
LMX1B-204ENST00000561065 NRACQ8N912 160 aa10.35□□□□□ -0.75
LMX1B-204ENST00000561065 IMMP2LQ96T52 175 aa10.35□□□□□ -0.75
LMX1B-204ENST00000561065 CTDSP1Q9GZU7 261 aa10.35□□□□□ -0.75
LMX1B-204ENST00000561065 IGKV3OR2-268A0A0C4DH90 116 aa10.34□□□□□ -0.75
LMX1B-204ENST00000561065 A0A1B0GXF2 115 aa10.34□□□□□ -0.75
LMX1B-204ENST00000561065 TMEM218A2RU14 115 aa10.34□□□□□ -0.75
LMX1B-204ENST00000561065 GAS8-AS1O95177 125 aa10.34□□□□□ -0.75
LMX1B-204ENST00000561065 TNFRSF6BO95407 300 aa10.34□□□□□ -0.75
LMX1B-204ENST00000561065 PRSS1P07477 247 aa10.34□□□□□ -0.75
LMX1B-204ENST00000561065 RAB5AP20339 215 aa10.34□□□□□ -0.75
LMX1B-204ENST00000561065 TMEM136Q6ZRR5 245 aa10.34□□□□□ -0.75
LMX1B-204ENST00000561065 CHAC1Q9BUX1 264 aa10.34□□□□□ -0.75
LMX1B-204ENST00000561065 LAMTOR2Q9Y2Q5 125 aa10.34□□□□□ -0.75
LMX1B-204ENST00000561065 CSDC2Q9Y534 153 aaKnown RBP10.34□□□□□ -0.75
LMX1B-204ENST00000561065 D6R8Y8 96 aa10.33□□□□□ -0.76
LMX1B-204ENST00000561065 KRTAP10-4P60372 401 aaPredicted RBP10.33□□□□□ -0.76
LMX1B-204ENST00000561065 ZNF664Q8N3J9 261 aa10.33□□□□□ -0.76
LMX1B-204ENST00000561065 SEC11CQ9BY50 192 aa10.33□□□□□ -0.76
LMX1B-204ENST00000561065 hDV102S1A0JD36 115 aa10.33□□□□□ -0.76
LMX1B-204ENST00000561065 GAGE12HA6NDE8 117 aa10.33□□□□□ -0.76
LMX1B-204ENST00000561065 CIRBP-AS1Q8TBR5 109 aa10.33□□□□□ -0.76
LMX1B-204ENST00000561065 CHCHD10Q8WYQ3 142 aaPredicted RBP10.33□□□□□ -0.76
LMX1B-204ENST00000561065 S100PP25815 95 aa10.32□□□□□ -0.76
LMX1B-204ENST00000561065 IFITM2Q01629 132 aa10.32□□□□□ -0.76
LMX1B-204ENST00000561065 PRELID3AQ96N28 172 aa10.32□□□□□ -0.76
LMX1B-204ENST00000561065 TIMM21Q9BVV7 248 aa10.32□□□□□ -0.76
LMX1B-204ENST00000561065 CDC42SE2Q9NRR3 84 aa10.32□□□□□ -0.76
LMX1B-204ENST00000561065 TRAV9-1A0A075B6T8 112 aa10.31□□□□□ -0.76
LMX1B-204ENST00000561065 C1orf196B1AJZ1 125 aa10.31□□□□□ -0.76
LMX1B-204ENST00000561065 SMIM2Q9BVW6 85 aa10.31□□□□□ -0.76
LMX1B-204ENST00000561065 LINC00959A0A1B0GUT2 108 aa10.3□□□□□ -0.76
LMX1B-204ENST00000561065 PLA2G1BP04054 148 aaKnown RBP10.3□□□□□ -0.76
LMX1B-204ENST00000561065 G0S2P27469 103 aa10.3□□□□□ -0.76
LMX1B-204ENST00000561065 C9orf163Q8N9P6 203 aa10.3□□□□□ -0.76
LMX1B-204ENST00000561065 CNBPP62633 177 aaKnown RBP10.29□□□□□ -0.76
LMX1B-204ENST00000561065 COMMD7Q86VX2 200 aa10.29□□□□□ -0.76
LMX1B-204ENST00000561065 MAP1LC3AQ9H492 121 aa10.29□□□□□ -0.76
LMX1B-204ENST00000561065 PKIGQ9Y2B9 76 aa10.29□□□□□ -0.76
LMX1B-204ENST00000561065 PANO1I0J062 215 aa10.28□□□□□ -0.76
LMX1B-204ENST00000561065 CD164L2Q6UWJ8 174 aa10.28□□□□□ -0.76
LMX1B-204ENST00000561065 SPANXA1Q9NS26 97 aa10.28□□□□□ -0.76
LMX1B-204ENST00000561065 IGHV3-64A0A075B6Q5 118 aa10.27□□□□□ -0.77
LMX1B-204ENST00000561065 K7EMI3 77 aa10.27□□□□□ -0.77
LMX1B-204ENST00000561065 NPYP01303 97 aa10.27□□□□□ -0.77
LMX1B-204ENST00000561065 XCL1P47992 114 aa10.27□□□□□ -0.77
LMX1B-204ENST00000561065 COX19Q49B96 90 aa10.27□□□□□ -0.77
LMX1B-204ENST00000561065 DPH3Q96FX2 82 aa10.27□□□□□ -0.77
LMX1B-204ENST00000561065 UBE2D4Q9Y2X8 147 aa10.27□□□□□ -0.77
LMX1B-204ENST00000561065 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.27□□□□□ -0.77
LMX1B-204ENST00000561065 IGHV1-58A0A0C4DH39 117 aa10.26□□□□□ -0.77
LMX1B-204ENST00000561065 PRSS47A8MTI9 375 aa10.26□□□□□ -0.77
LMX1B-204ENST00000561065 MALP21145 153 aa10.26□□□□□ -0.77
LMX1B-204ENST00000561065 SLPIP03973 132 aa10.25□□□□□ -0.77
LMX1B-204ENST00000561065 IFI27P40305 119 aaPredicted RBP10.25□□□□□ -0.77
LMX1B-204ENST00000561065 ZNF561-AS1K7EIQ3 104 aa10.24□□□□□ -0.77
LMX1B-204ENST00000561065 APOMO95445 188 aa10.24□□□□□ -0.77
LMX1B-204ENST00000561065 NDUFA5Q16718 116 aa10.24□□□□□ -0.77
LMX1B-204ENST00000561065 NXT2Q9NPJ8 142 aaKnown RBP10.24□□□□□ -0.77
LMX1B-204ENST00000561065 LOC389332A0A1B0GUA5 103 aa10.23□□□□□ -0.77
LMX1B-204ENST00000561065 COX7A2LO14548 114 aa10.23□□□□□ -0.77
LMX1B-204ENST00000561065 MRPS36P82909 103 aaKnown RBP10.23□□□□□ -0.77
LMX1B-204ENST00000561065 FOXI1Q12951 378 aa10.23□□□□□ -0.77
LMX1B-204ENST00000561065 RHEBQ15382 184 aa10.23□□□□□ -0.77
LMX1B-204ENST00000561065 ORMDL2Q53FV1 153 aa10.23□□□□□ -0.77
LMX1B-204ENST00000561065 SDIM1Q6ZPB5 146 aa10.23□□□□□ -0.77
LMX1B-204ENST00000561065 Q8N8P6 123 aa10.23□□□□□ -0.77
LMX1B-204ENST00000561065 C15orf56Q8N910 161 aa10.23□□□□□ -0.77
LMX1B-204ENST00000561065 GVQW2A0A096LPI5 108 aaPredicted RBP10.22□□□□□ -0.77
LMX1B-204ENST00000561065 TRAV13-1A0A0B4J241 112 aa10.22□□□□□ -0.77
LMX1B-204ENST00000561065 KRTAP29-1A8MX34 341 aaPredicted RBP10.21□□□□□ -0.78
LMX1B-204ENST00000561065 ADCYAP1P18509 176 aa10.21□□□□□ -0.78
LMX1B-204ENST00000561065 GNB1LQ9BYB4 327 aa10.21□□□□□ -0.78
LMX1B-204ENST00000561065 PYGO1Q9Y3Y4 419 aa10.21□□□□□ -0.78
LMX1B-204ENST00000561065 HNRNPA3P51991 378 aaKnown RBP10.2□□□□□ -0.78
LMX1B-204ENST00000561065 RPL39P62891 51 aaKnown RBP10.2□□□□□ -0.78
LMX1B-204ENST00000561065 CIRBPQ14011 172 aaKnown RBP10.2□□□□□ -0.78
LMX1B-204ENST00000561065 PAPPA-AS1Q5QFB9 102 aa10.2□□□□□ -0.78
LMX1B-204ENST00000561065 C10orf91Q5T1B1 145 aa10.2□□□□□ -0.78
LMX1B-204ENST00000561065 Q6ZN92 141 aa10.2□□□□□ -0.78
LMX1B-204ENST00000561065 RPS10P5Q9NQ39 176 aa10.2□□□□□ -0.78
LMX1B-204ENST00000561065 CYSLTR1Q9Y271 337 aa10.2□□□□□ -0.78
LMX1B-204ENST00000561065 CARHSP1Q9Y2V2 147 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms