RNA–Protein interactions for RNA: ENST00000560986.1

HMG20A-212, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-212ENST00000560986 SEC11AP67812 179 aa4.04□□□□□ -1.76
HMG20A-212ENST00000560986 MRPS36P82909 103 aaKnown RBP4.04□□□□□ -1.76
HMG20A-212ENST00000560986 COTL1Q14019 142 aa4.04□□□□□ -1.76
HMG20A-212ENST00000560986 PMVKQ15126 192 aa4.04□□□□□ -1.76
HMG20A-212ENST00000560986 C12orf54Q6X4T0 127 aa4.04□□□□□ -1.76
HMG20A-212ENST00000560986 SH2D6Q7Z4S9 175 aa4.04□□□□□ -1.76
HMG20A-212ENST00000560986 RPL39LQ96EH5 51 aaKnown RBP4.04□□□□□ -1.76
HMG20A-212ENST00000560986 C2orf88Q9BSF0 95 aa4.04□□□□□ -1.76
HMG20A-212ENST00000560986 C2CD3Q4AC94 2353 aa4.04□□□□□ -1.76
HMG20A-212ENST00000560986 TRGV1A0A0A0MS02 117 aa4.03□□□□□ -1.76
HMG20A-212ENST00000560986 IGLV9-49A0A0B4J1Y8 123 aa4.03□□□□□ -1.76
HMG20A-212ENST00000560986 PLAC8L1A1L4L8 177 aa4.03□□□□□ -1.76
HMG20A-212ENST00000560986 K7EQD1 137 aa4.03□□□□□ -1.76
HMG20A-212ENST00000560986 GAS8-AS1O95177 125 aa4.03□□□□□ -1.76
HMG20A-212ENST00000560986 ZNF25P17030 456 aaPredicted RBP4.03□□□□□ -1.76
HMG20A-212ENST00000560986 HNRNPA3P51991 378 aaKnown RBP4.03□□□□□ -1.76
HMG20A-212ENST00000560986 HERVK_113P61574 105 aa4.03□□□□□ -1.76
HMG20A-212ENST00000560986 CTAG1AP78358 180 aa4.03□□□□□ -1.76
HMG20A-212ENST00000560986 C3orf56Q8N813 242 aa4.03□□□□□ -1.76
HMG20A-212ENST00000560986 C14orf144Q96I85 54 aa4.03□□□□□ -1.76
HMG20A-212ENST00000560986 PRADC1Q9BSG0 188 aa4.03□□□□□ -1.76
HMG20A-212ENST00000560986 HIGD1BQ9P298 99 aa4.03□□□□□ -1.76
HMG20A-212ENST00000560986 HHLA3Q9XRX5 114 aa4.03□□□□□ -1.76
HMG20A-212ENST00000560986 SETXQ7Z333 2677 aaKnown RBP4.03□□□□□ -1.76
HMG20A-212ENST00000560986 MUC4Q99102 2169 aa4.02□□□□□ -1.77
HMG20A-212ENST00000560986 TRGV2A0A075B6R0 118 aa4.02□□□□□ -1.77
HMG20A-212ENST00000560986 TRAV26-1A0A087WT03 109 aa4.02□□□□□ -1.77
HMG20A-212ENST00000560986 C11orf86A6NJI1 115 aa4.02□□□□□ -1.77
HMG20A-212ENST00000560986 HTN1P15515 57 aa4.02□□□□□ -1.77
HMG20A-212ENST00000560986 FXYD7P58549 80 aa4.02□□□□□ -1.77
HMG20A-212ENST00000560986 UBE2D3P61077 147 aa4.02□□□□□ -1.77
HMG20A-212ENST00000560986 UBE2D2P62837 147 aa4.02□□□□□ -1.77
HMG20A-212ENST00000560986 TAL2Q16559 108 aa4.02□□□□□ -1.77
HMG20A-212ENST00000560986 KRTAP24-1Q3LI83 254 aa4.02□□□□□ -1.77
HMG20A-212ENST00000560986 LINC00173Q6ZV60 143 aa4.02□□□□□ -1.77
HMG20A-212ENST00000560986 FAM19A3Q7Z5A8 133 aa4.02□□□□□ -1.77
HMG20A-212ENST00000560986 STPG4Q8N801 248 aa4.02□□□□□ -1.77
HMG20A-212ENST00000560986 BAALCQ8WXS3 180 aa4.02□□□□□ -1.77
HMG20A-212ENST00000560986 AMELXQ99217 191 aa4.02□□□□□ -1.77
HMG20A-212ENST00000560986 JPT2Q9H910 190 aa4.02□□□□□ -1.77
HMG20A-212ENST00000560986 CHTOPQ9Y3Y2 248 aaKnown RBP4.02□□□□□ -1.77
HMG20A-212ENST00000560986 SELENOKQ9Y6D0 94 aa4.02□□□□□ -1.77
HMG20A-212ENST00000560986 A4D1N5 150 aa4.01□□□□□ -1.77
HMG20A-212ENST00000560986 E9PLD3 99 aa4.01□□□□□ -1.77
HMG20A-212ENST00000560986 H3BNG1 76 aa4.01□□□□□ -1.77
HMG20A-212ENST00000560986 CCL25O15444 150 aa4.01□□□□□ -1.77
HMG20A-212ENST00000560986 LINC00694P0DN24 101 aa4.01□□□□□ -1.77
HMG20A-212ENST00000560986 COL5A1-AS1Q5SY13 56 aa4.01□□□□□ -1.77
HMG20A-212ENST00000560986 ZC2HC1BQ5TFG8 222 aa4.01□□□□□ -1.77
HMG20A-212ENST00000560986 VCX2Q9H322 139 aa4.01□□□□□ -1.77
HMG20A-212ENST00000560986 PRO1933Q9H354 126 aa4.01□□□□□ -1.77
HMG20A-212ENST00000560986 CST9LQ9H4G1 147 aa4.01□□□□□ -1.77
HMG20A-212ENST00000560986 NOP10Q9NPE3 64 aaKnown RBP4.01□□□□□ -1.77
HMG20A-212ENST00000560986 MRPL16Q9NX20 251 aaKnown RBP4.01□□□□□ -1.77
HMG20A-212ENST00000560986 MRPL35Q9NZE8 188 aaKnown RBP4.01□□□□□ -1.77
HMG20A-212ENST00000560986 PRO0255Q9UI72 69 aa4.01□□□□□ -1.77
HMG20A-212ENST00000560986 AGRNO00468 2067 aa4□□□□□ -1.77
HMG20A-212ENST00000560986 IGHV3OR16-12A0A075B7B8 117 aa4□□□□□ -1.77
HMG20A-212ENST00000560986 P0DMU3 169 aa4□□□□□ -1.77
HMG20A-212ENST00000560986 FAM231AP0DMU4 169 aa4□□□□□ -1.77
HMG20A-212ENST00000560986 FAM231CP0DMU5 169 aa4□□□□□ -1.77
HMG20A-212ENST00000560986 RPL35AP18077 110 aaKnown RBP4□□□□□ -1.77
HMG20A-212ENST00000560986 SFTA2Q6UW10 78 aa4□□□□□ -1.77
HMG20A-212ENST00000560986 Q6ZTI0 123 aa4□□□□□ -1.77
HMG20A-212ENST00000560986 SLC25A29Q8N8R3 303 aa4□□□□□ -1.77
HMG20A-212ENST00000560986 OR11H2Q8NH07 326 aa4□□□□□ -1.77
HMG20A-212ENST00000560986 C11orf68Q9H3H3 251 aaKnown RBP4□□□□□ -1.77
HMG20A-212ENST00000560986 F8P00451 2351 aa3.99□□□□□ -1.77
HMG20A-212ENST00000560986 FLNBO75369 2602 aaKnown RBP3.99□□□□□ -1.77
HMG20A-212ENST00000560986 IGLV4-3A0A075B6K6 122 aa3.99□□□□□ -1.77
HMG20A-212ENST00000560986 TRBV25-1A0A075B6N4 114 aa3.99□□□□□ -1.77
HMG20A-212ENST00000560986 TRGV4A0A0C4DH28 118 aa3.99□□□□□ -1.77
HMG20A-212ENST00000560986 TINCRA0A1B0GVN0 87 aa3.99□□□□□ -1.77
HMG20A-212ENST00000560986 SPART-AS1P0CW21 52 aa3.99□□□□□ -1.77
HMG20A-212ENST00000560986 FGF6P10767 208 aa3.99□□□□□ -1.77
HMG20A-212ENST00000560986 NMUP48645 174 aa3.99□□□□□ -1.77
HMG20A-212ENST00000560986 LINC01547P58512 204 aaPredicted RBP3.99□□□□□ -1.77
HMG20A-212ENST00000560986 HERVK_113P63121 156 aa3.99□□□□□ -1.77
HMG20A-212ENST00000560986 HSD52Q0P140 79 aa3.99□□□□□ -1.77
HMG20A-212ENST00000560986 ATOH7Q8N100 152 aa3.99□□□□□ -1.77
HMG20A-212ENST00000560986 CHCHD7Q9BUK0 85 aa3.99□□□□□ -1.77
HMG20A-212ENST00000560986 PPDPFQ9H3Y8 114 aa3.99□□□□□ -1.77
HMG20A-212ENST00000560986 UBE2D4Q9Y2X8 147 aa3.99□□□□□ -1.77
HMG20A-212ENST00000560986 IGLV4-69A0A075B6H9 119 aa3.98□□□□□ -1.77
HMG20A-212ENST00000560986 A6NDN8 102 aa3.98□□□□□ -1.77
HMG20A-212ENST00000560986 SMIM1B2RUZ4 78 aa3.98□□□□□ -1.77
HMG20A-212ENST00000560986 H0Y8G0 127 aa3.98□□□□□ -1.77
HMG20A-212ENST00000560986 H3BRM9 83 aa3.98□□□□□ -1.77
HMG20A-212ENST00000560986 ATP5G1P05496 136 aa3.98□□□□□ -1.77
HMG20A-212ENST00000560986 Q6ZVH6 145 aa3.98□□□□□ -1.77
HMG20A-212ENST00000560986 SBSPONQ8IVN8 264 aa3.98□□□□□ -1.77
HMG20A-212ENST00000560986 Q8NAQ8 132 aa3.98□□□□□ -1.77
HMG20A-212ENST00000560986 ZNRF2Q8NHG8 242 aa3.98□□□□□ -1.77
HMG20A-212ENST00000560986 PLEKHB2Q96CS7 222 aa3.98□□□□□ -1.77
HMG20A-212ENST00000560986 TMEM101Q96IK0 257 aa3.98□□□□□ -1.77
HMG20A-212ENST00000560986 TMEM243Q9BU79 118 aa3.98□□□□□ -1.77
HMG20A-212ENST00000560986 SNHG12Q9BXW3 62 aa3.98□□□□□ -1.77
HMG20A-212ENST00000560986 WFDC10AQ9H1F0 79 aa3.98□□□□□ -1.77
HMG20A-212ENST00000560986 WNK1Q9H4A3 2382 aa3.97□□□□□ -1.77
HMG20A-212ENST00000560986 SETD2Q9BYW2 2564 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms