RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 UQCC3Q6UW78 93 aa8.45□□□□□ -1.06
CTDSPL2-209ENST00000560620 C20orf78Q9BR46 151 aa8.45□□□□□ -1.06
CTDSPL2-209ENST00000560620 AP5S1Q9NUS5 200 aa8.45□□□□□ -1.06
CTDSPL2-209ENST00000560620 PPBPP02775 128 aa8.44□□□□□ -1.06
CTDSPL2-209ENST00000560620 XCL1P47992 114 aa8.44□□□□□ -1.06
CTDSPL2-209ENST00000560620 CFAP161Q6P656 301 aa8.44□□□□□ -1.06
CTDSPL2-209ENST00000560620 TMEM18Q96B42 140 aa8.44□□□□□ -1.06
CTDSPL2-209ENST00000560620 TRBV24-1A0A075B6N3 115 aa8.43□□□□□ -1.06
CTDSPL2-209ENST00000560620 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.43□□□□□ -1.06
CTDSPL2-209ENST00000560620 NPYP01303 97 aa8.43□□□□□ -1.06
CTDSPL2-209ENST00000560620 SS18Q15532 418 aa8.43□□□□□ -1.06
CTDSPL2-209ENST00000560620 TMEM136Q6ZRR5 245 aa8.43□□□□□ -1.06
CTDSPL2-209ENST00000560620 Q6ZSA8 131 aa8.43□□□□□ -1.06
CTDSPL2-209ENST00000560620 MRPL52Q86TS9 123 aaKnown RBP8.43□□□□□ -1.06
CTDSPL2-209ENST00000560620 ORMDL3Q8N138 153 aa8.43□□□□□ -1.06
CTDSPL2-209ENST00000560620 ZNF664Q8N3J9 261 aa8.43□□□□□ -1.06
CTDSPL2-209ENST00000560620 LINC00959A0A1B0GUT2 108 aa8.42□□□□□ -1.06
CTDSPL2-209ENST00000560620 TMEM218A2RU14 115 aa8.42□□□□□ -1.06
CTDSPL2-209ENST00000560620 TCAPO15273 167 aa8.42□□□□□ -1.06
CTDSPL2-209ENST00000560620 CCL25O15444 150 aa8.42□□□□□ -1.06
CTDSPL2-209ENST00000560620 HIGD2BQ4VC39 106 aa8.42□□□□□ -1.06
CTDSPL2-209ENST00000560620 COMMD7Q86VX2 200 aa8.42□□□□□ -1.06
CTDSPL2-209ENST00000560620 PRELID3AQ96N28 172 aa8.42□□□□□ -1.06
CTDSPL2-209ENST00000560620 SMIM2Q9BVW6 85 aa8.42□□□□□ -1.06
CTDSPL2-209ENST00000560620 CDC42SE2Q9NRR3 84 aa8.42□□□□□ -1.06
CTDSPL2-209ENST00000560620 RAB5AP20339 215 aa8.41□□□□□ -1.06
CTDSPL2-209ENST00000560620 RNASE13Q5GAN3 156 aaKnown RBP8.41□□□□□ -1.06
CTDSPL2-209ENST00000560620 SCXQ7RTU7 201 aa8.41□□□□□ -1.06
CTDSPL2-209ENST00000560620 C9orf163Q8N9P6 203 aa8.41□□□□□ -1.06
CTDSPL2-209ENST00000560620 UBE2D4Q9Y2X8 147 aa8.41□□□□□ -1.06
CTDSPL2-209ENST00000560620 PHOX2AO14813 284 aa8.4□□□□□ -1.06
CTDSPL2-209ENST00000560620 ADCYAP1P18509 176 aa8.4□□□□□ -1.06
CTDSPL2-209ENST00000560620 RPL32P62910 135 aaKnown RBP8.4□□□□□ -1.06
CTDSPL2-209ENST00000560620 CHAC1Q9BUX1 264 aa8.4□□□□□ -1.06
CTDSPL2-209ENST00000560620 TRAV13-1A0A0B4J241 112 aa8.39□□□□□ -1.07
CTDSPL2-209ENST00000560620 LOC389332A0A1B0GUA5 103 aa8.39□□□□□ -1.07
CTDSPL2-209ENST00000560620 INAFM2P0DMQ5 153 aa8.39□□□□□ -1.07
CTDSPL2-209ENST00000560620 RPL39P62891 51 aaKnown RBP8.39□□□□□ -1.07
CTDSPL2-209ENST00000560620 FOXI1Q12951 378 aa8.39□□□□□ -1.07
CTDSPL2-209ENST00000560620 C15orf56Q8N910 161 aa8.39□□□□□ -1.07
CTDSPL2-209ENST00000560620 DPH3Q96FX2 82 aa8.39□□□□□ -1.07
CTDSPL2-209ENST00000560620 CTDSP1Q9GZU7 261 aa8.39□□□□□ -1.07
CTDSPL2-209ENST00000560620 CSDC2Q9Y534 153 aaKnown RBP8.39□□□□□ -1.07
CTDSPL2-209ENST00000560620 IGHV3-64A0A075B6Q5 118 aa8.38□□□□□ -1.07
CTDSPL2-209ENST00000560620 C1orf196B1AJZ1 125 aa8.38□□□□□ -1.07
CTDSPL2-209ENST00000560620 S100PP25815 95 aa8.38□□□□□ -1.07
CTDSPL2-209ENST00000560620 CNBPP62633 177 aaKnown RBP8.38□□□□□ -1.07
CTDSPL2-209ENST00000560620 Q6ZUT4 128 aa8.38□□□□□ -1.07
CTDSPL2-209ENST00000560620 LINC00528Q8N1L1 170 aa8.38□□□□□ -1.07
CTDSPL2-209ENST00000560620 CIRBP-AS1Q8TBR5 109 aa8.38□□□□□ -1.07
CTDSPL2-209ENST00000560620 SEC11CQ9BY50 192 aa8.38□□□□□ -1.07
CTDSPL2-209ENST00000560620 MAP1LC3AQ9H492 121 aa8.38□□□□□ -1.07
CTDSPL2-209ENST00000560620 PLA2G1BP04054 148 aaKnown RBP8.37□□□□□ -1.07
CTDSPL2-209ENST00000560620 MALP21145 153 aa8.37□□□□□ -1.07
CTDSPL2-209ENST00000560620 CD164L2Q6UWJ8 174 aa8.37□□□□□ -1.07
CTDSPL2-209ENST00000560620 IMMP2LQ96T52 175 aa8.37□□□□□ -1.07
CTDSPL2-209ENST00000560620 TIMM21Q9BVV7 248 aa8.37□□□□□ -1.07
CTDSPL2-209ENST00000560620 LAMTOR2Q9Y2Q5 125 aa8.37□□□□□ -1.07
CTDSPL2-209ENST00000560620 IGHV1-58A0A0C4DH39 117 aa8.36□□□□□ -1.07
CTDSPL2-209ENST00000560620 SDIM1Q6ZPB5 146 aa8.36□□□□□ -1.07
CTDSPL2-209ENST00000560620 GVQW2A0A096LPI5 108 aaPredicted RBP8.35□□□□□ -1.07
CTDSPL2-209ENST00000560620 ZNF561-AS1K7EIQ3 104 aa8.35□□□□□ -1.07
CTDSPL2-209ENST00000560620 SLPIP03973 132 aa8.35□□□□□ -1.07
CTDSPL2-209ENST00000560620 IFI27P40305 119 aaPredicted RBP8.35□□□□□ -1.07
CTDSPL2-209ENST00000560620 SPANXA1Q9NS26 97 aa8.35□□□□□ -1.07
CTDSPL2-209ENST00000560620 FAT1Q14517 4588 aa8.35□□□□□ -1.07
CTDSPL2-209ENST00000560620 COX7A2LO14548 114 aa8.34□□□□□ -1.07
CTDSPL2-209ENST00000560620 LINC00526Q96FQ7 95 aa8.34□□□□□ -1.07
CTDSPL2-209ENST00000560620 OPRPNQ99935 248 aaPredicted RBP8.34□□□□□ -1.07
CTDSPL2-209ENST00000560620 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.34□□□□□ -1.07
CTDSPL2-209ENST00000560620 TRAV9-1A0A075B6T8 112 aa8.33□□□□□ -1.08
CTDSPL2-209ENST00000560620 IFITM10A6NMD0 228 aa8.33□□□□□ -1.08
CTDSPL2-209ENST00000560620 KIAA1644Q3SXP7 199 aa8.33□□□□□ -1.08
CTDSPL2-209ENST00000560620 RPS10P5Q9NQ39 176 aa8.33□□□□□ -1.08
CTDSPL2-209ENST00000560620 PRSS47A8MTI9 375 aa8.32□□□□□ -1.08
CTDSPL2-209ENST00000560620 COX6A2Q02221 97 aa8.32□□□□□ -1.08
CTDSPL2-209ENST00000560620 C5orf38Q86SI9 138 aa8.32□□□□□ -1.08
CTDSPL2-209ENST00000560620 Q8N8P6 123 aa8.32□□□□□ -1.08
CTDSPL2-209ENST00000560620 DNAH8Q96JB1 4490 aa8.31□□□□□ -1.08
CTDSPL2-209ENST00000560620 IGKV2-24A0A0C4DH68 120 aa8.31□□□□□ -1.08
CTDSPL2-209ENST00000560620 PANO1I0J062 215 aa8.31□□□□□ -1.08
CTDSPL2-209ENST00000560620 APOMO95445 188 aa8.31□□□□□ -1.08
CTDSPL2-209ENST00000560620 CHTF8P0CG12 524 aa8.31□□□□□ -1.08
CTDSPL2-209ENST00000560620 RHEBQ15382 184 aa8.31□□□□□ -1.08
CTDSPL2-209ENST00000560620 ORMDL2Q53FV1 153 aa8.31□□□□□ -1.08
CTDSPL2-209ENST00000560620 CARD19Q96LW7 228 aa8.31□□□□□ -1.08
CTDSPL2-209ENST00000560620 NXT2Q9NPJ8 142 aaKnown RBP8.31□□□□□ -1.08
CTDSPL2-209ENST00000560620 CYSLTR1Q9Y271 337 aa8.31□□□□□ -1.08
CTDSPL2-209ENST00000560620 MRPS36P82909 103 aaKnown RBP8.3□□□□□ -1.08
CTDSPL2-209ENST00000560620 C2orf66Q6UXQ4 117 aa8.3□□□□□ -1.08
CTDSPL2-209ENST00000560620 Q6ZN92 141 aa8.3□□□□□ -1.08
CTDSPL2-209ENST00000560620 PRSS3P2Q8NHM4 247 aa8.3□□□□□ -1.08
CTDSPL2-209ENST00000560620 CARHSP1Q9Y2V2 147 aaKnown RBP8.3□□□□□ -1.08
CTDSPL2-209ENST00000560620 SRRM2Q9UQ35 2752 aaKnown RBP8.29□□□□□ -1.08
CTDSPL2-209ENST00000560620 IGLV4-69A0A075B6H9 119 aa8.29□□□□□ -1.08
CTDSPL2-209ENST00000560620 APOC3P02656 99 aa8.29□□□□□ -1.08
CTDSPL2-209ENST00000560620 SYCNQ0VAF6 134 aa8.29□□□□□ -1.08
CTDSPL2-209ENST00000560620 NDUFA5Q16718 116 aa8.29□□□□□ -1.08
CTDSPL2-209ENST00000560620 MAJINQ3KP22 176 aa8.29□□□□□ -1.08
CTDSPL2-209ENST00000560620 C10orf91Q5T1B1 145 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms