RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 SNAPINO95295 136 aa6.12□□□□□ -1.43
HERC1-209ENST00000560519 PPP1R17O96001 155 aa6.12□□□□□ -1.43
HERC1-209ENST00000560519 APOC3P02656 99 aa6.12□□□□□ -1.43
HERC1-209ENST00000560519 S100PP25815 95 aa6.12□□□□□ -1.43
HERC1-209ENST00000560519 CAMPP49913 170 aa6.12□□□□□ -1.43
HERC1-209ENST00000560519 GAGE6Q13070 117 aa6.12□□□□□ -1.43
HERC1-209ENST00000560519 C4orf48Q5BLP8 95 aa6.12□□□□□ -1.43
HERC1-209ENST00000560519 MRPL54Q6P161 138 aaKnown RBP6.12□□□□□ -1.43
HERC1-209ENST00000560519 NTM-AS1Q6ZSK4 140 aa6.12□□□□□ -1.43
HERC1-209ENST00000560519 SVBPQ8N300 66 aa6.12□□□□□ -1.43
HERC1-209ENST00000560519 MRAP2Q96G30 205 aa6.12□□□□□ -1.43
HERC1-209ENST00000560519 BTF3L4Q96K17 158 aa6.12□□□□□ -1.43
HERC1-209ENST00000560519 NIT2Q9NQR4 276 aa6.12□□□□□ -1.43
HERC1-209ENST00000560519 C7orf77A4D0Y5 90 aa6.11□□□□□ -1.43
HERC1-209ENST00000560519 PHOX2AO14813 284 aa6.11□□□□□ -1.43
HERC1-209ENST00000560519 UBE2L6O14933 153 aa6.11□□□□□ -1.43
HERC1-209ENST00000560519 AMN1Q8IY45 258 aa6.11□□□□□ -1.43
HERC1-209ENST00000560519 TMEM243Q9BU79 118 aa6.11□□□□□ -1.43
HERC1-209ENST00000560519 PLAC8Q9NZF1 115 aa6.11□□□□□ -1.43
HERC1-209ENST00000560519 TRAV26-2A0A0B4J265 109 aa6.1□□□□□ -1.43
HERC1-209ENST00000560519 A0A1B0GUV1 79 aa6.1□□□□□ -1.43
HERC1-209ENST00000560519 A0A1B0GXF2 115 aa6.1□□□□□ -1.43
HERC1-209ENST00000560519 RAB4AP20338 218 aa6.1□□□□□ -1.43
HERC1-209ENST00000560519 FAM104BQ5XKR9 115 aa6.1□□□□□ -1.43
HERC1-209ENST00000560519 CFAP161Q6P656 301 aa6.1□□□□□ -1.43
HERC1-209ENST00000560519 GATD1Q8NB37 220 aa6.1□□□□□ -1.43
HERC1-209ENST00000560519 LINC01600Q96MT4 127 aa6.1□□□□□ -1.43
HERC1-209ENST00000560519 RPS10P5Q9NQ39 176 aa6.1□□□□□ -1.43
HERC1-209ENST00000560519 CHTF8P0CG12 524 aa6.09□□□□□ -1.43
HERC1-209ENST00000560519 PRR3P79522 188 aaKnown RBP6.09□□□□□ -1.43
HERC1-209ENST00000560519 REG3GQ6UW15 175 aa6.09□□□□□ -1.43
HERC1-209ENST00000560519 C20orf203Q8NBC4 194 aa6.09□□□□□ -1.43
HERC1-209ENST00000560519 ST20Q9HBF5 79 aa6.09□□□□□ -1.43
HERC1-209ENST00000560519 TRBV6-5A0A0K0K1A5 114 aa6.08□□□□□ -1.44
HERC1-209ENST00000560519 PPBPP02775 128 aa6.08□□□□□ -1.44
HERC1-209ENST00000560519 CKS2P33552 79 aa6.08□□□□□ -1.44
HERC1-209ENST00000560519 COTL1Q14019 142 aa6.08□□□□□ -1.44
HERC1-209ENST00000560519 COX19Q49B96 90 aa6.08□□□□□ -1.44
HERC1-209ENST00000560519 SLC7A5P1Q8MH63 180 aa6.08□□□□□ -1.44
HERC1-209ENST00000560519 RPL39LQ96EH5 51 aaKnown RBP6.08□□□□□ -1.44
HERC1-209ENST00000560519 LINC00474Q9P2X8 69 aa6.08□□□□□ -1.44
HERC1-209ENST00000560519 A0A0J9YXV3 536 aa6.07□□□□□ -1.44
HERC1-209ENST00000560519 SDHAF1A6NFY7 115 aa6.07□□□□□ -1.44
HERC1-209ENST00000560519 NCR2O95944 276 aa6.07□□□□□ -1.44
HERC1-209ENST00000560519 RPS10P46783 165 aaKnown RBP6.07□□□□□ -1.44
HERC1-209ENST00000560519 MRPL51Q4U2R6 128 aaKnown RBP6.07□□□□□ -1.44
HERC1-209ENST00000560519 SPINK6Q6UWN8 80 aa6.07□□□□□ -1.44
HERC1-209ENST00000560519 IGLV4-60A0A075B6I1 120 aa6.06□□□□□ -1.44
HERC1-209ENST00000560519 IGKV2-24A0A0C4DH68 120 aa6.06□□□□□ -1.44
HERC1-209ENST00000560519 I3L3M4 83 aa6.06□□□□□ -1.44
HERC1-209ENST00000560519 VCYO14598 125 aa6.06□□□□□ -1.44
HERC1-209ENST00000560519 PMCHP20382 165 aa6.06□□□□□ -1.44
HERC1-209ENST00000560519 AMTP48728 403 aa6.06□□□□□ -1.44
HERC1-209ENST00000560519 SMCPP49901 116 aaPredicted RBP6.06□□□□□ -1.44
HERC1-209ENST00000560519 COX6A2Q02221 97 aa6.06□□□□□ -1.44
HERC1-209ENST00000560519 MAJINQ3KP22 176 aa6.06□□□□□ -1.44
HERC1-209ENST00000560519 ORMDL3Q8N138 153 aa6.06□□□□□ -1.44
HERC1-209ENST00000560519 STPG4Q8N801 248 aa6.06□□□□□ -1.44
HERC1-209ENST00000560519 C15orf56Q8N910 161 aa6.06□□□□□ -1.44
HERC1-209ENST00000560519 C20orf78Q9BR46 151 aa6.06□□□□□ -1.44
HERC1-209ENST00000560519 LAMTOR2Q9Y2Q5 125 aa6.06□□□□□ -1.44
HERC1-209ENST00000560519 TRBV24-1A0A075B6N3 115 aa6.05□□□□□ -1.44
HERC1-209ENST00000560519 TRBV27A0A0K0K1C4 114 aa6.05□□□□□ -1.44
HERC1-209ENST00000560519 D6R8Y8 96 aa6.05□□□□□ -1.44
HERC1-209ENST00000560519 SMKR1H3BMG3 65 aa6.05□□□□□ -1.44
HERC1-209ENST00000560519 TCAPO15273 167 aa6.05□□□□□ -1.44
HERC1-209ENST00000560519 APCSP02743 223 aa6.05□□□□□ -1.44
HERC1-209ENST00000560519 MT-ND6P03923 174 aa6.05□□□□□ -1.44
HERC1-209ENST00000560519 SLPIP03973 132 aa6.05□□□□□ -1.44
HERC1-209ENST00000560519 SUMO2P61956 95 aaKnown RBP6.05□□□□□ -1.44
HERC1-209ENST00000560519 TMEM136Q6ZRR5 245 aa6.05□□□□□ -1.44
HERC1-209ENST00000560519 NRACQ8N912 160 aa6.05□□□□□ -1.44
HERC1-209ENST00000560519 TNXBP22105 4242 aa6.05□□□□□ -1.44
HERC1-209ENST00000560519 LRP2P98164 4655 aa6.04□□□□□ -1.44
HERC1-209ENST00000560519 GVQW2A0A096LPI5 108 aaPredicted RBP6.04□□□□□ -1.44
HERC1-209ENST00000560519 GAGE12HA6NDE8 117 aa6.04□□□□□ -1.44
HERC1-209ENST00000560519 TNFRSF6BO95407 300 aa6.04□□□□□ -1.44
HERC1-209ENST00000560519 POLR2KP53803 58 aaKnown RBP6.04□□□□□ -1.44
HERC1-209ENST00000560519 RPL32P62910 135 aaKnown RBP6.04□□□□□ -1.44
HERC1-209ENST00000560519 PRELID3AQ96N28 172 aa6.04□□□□□ -1.44
HERC1-209ENST00000560519 KIR2DL4Q99706 377 aa6.04□□□□□ -1.44
HERC1-209ENST00000560519 GNB1LQ9BYB4 327 aa6.04□□□□□ -1.44
HERC1-209ENST00000560519 RNF213Q63HN8 5207 aa6.03□□□□□ -1.44
HERC1-209ENST00000560519 H7C423 109 aa6.03□□□□□ -1.44
HERC1-209ENST00000560519 GAS8-AS1O95177 125 aa6.03□□□□□ -1.44
HERC1-209ENST00000560519 FCER1GP30273 86 aa6.03□□□□□ -1.44
HERC1-209ENST00000560519 HIGD2BQ4VC39 106 aa6.03□□□□□ -1.44
HERC1-209ENST00000560519 AMMECR1LQ6DCA0 310 aa6.03□□□□□ -1.44
HERC1-209ENST00000560519 SMCO4Q9NRQ5 59 aa6.03□□□□□ -1.44
HERC1-209ENST00000560519 A0A096LNI7 61 aa6.02□□□□□ -1.45
HERC1-209ENST00000560519 NPYP01303 97 aa6.02□□□□□ -1.45
HERC1-209ENST00000560519 SMAGPQ0VAQ4 97 aa6.02□□□□□ -1.45
HERC1-209ENST00000560519 Q6ZRP5 223 aa6.02□□□□□ -1.45
HERC1-209ENST00000560519 PRSS3P2Q8NHM4 247 aa6.02□□□□□ -1.45
HERC1-209ENST00000560519 CHCHD10Q8WYQ3 142 aaPredicted RBP6.02□□□□□ -1.45
HERC1-209ENST00000560519 SMIM2Q9BVW6 85 aa6.02□□□□□ -1.45
HERC1-209ENST00000560519 MAP1LC3AQ9H492 121 aa6.02□□□□□ -1.45
HERC1-209ENST00000560519 TGIF2-C20orf24A0A0A6YYL0 155 aa6.01□□□□□ -1.45
HERC1-209ENST00000560519 IGKV3OR2-268A0A0C4DH90 116 aa6.01□□□□□ -1.45
HERC1-209ENST00000560519 TSHBP01222 138 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms