RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 CIRBPQ14011 172 aaKnown RBP9.05□□□□□ -0.96
TPM1-223ENST00000560445 SS18Q15532 418 aa9.05□□□□□ -0.96
TPM1-223ENST00000560445 KIR2DL4Q99706 377 aa9.05□□□□□ -0.96
TPM1-223ENST00000560445 LINC00474Q9P2X8 69 aa9.05□□□□□ -0.96
TPM1-223ENST00000560445 V9GYV3 84 aa9.05□□□□□ -0.96
TPM1-223ENST00000560445 GVQW2A0A096LPI5 108 aaPredicted RBP9.04□□□□□ -0.96
TPM1-223ENST00000560445 RAB4AP20338 218 aa9.04□□□□□ -0.96
TPM1-223ENST00000560445 MRPL52Q86TS9 123 aaKnown RBP9.04□□□□□ -0.96
TPM1-223ENST00000560445 NUP35Q8NFH5 326 aa9.04□□□□□ -0.96
TPM1-223ENST00000560445 C7orf33Q8WU49 177 aa9.04□□□□□ -0.96
TPM1-223ENST00000560445 TMEM18Q96B42 140 aa9.04□□□□□ -0.96
TPM1-223ENST00000560445 IGHV1-58A0A0C4DH39 117 aa9.03□□□□□ -0.96
TPM1-223ENST00000560445 ESDP10768 282 aa9.03□□□□□ -0.96
TPM1-223ENST00000560445 AMN1Q8IY45 258 aa9.03□□□□□ -0.96
TPM1-223ENST00000560445 TMEM242Q9NWH2 141 aa9.03□□□□□ -0.96
TPM1-223ENST00000560445 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.03□□□□□ -0.96
TPM1-223ENST00000560445 LINC00862A6NCI5 91 aa9.02□□□□□ -0.97
TPM1-223ENST00000560445 TSHBP01222 138 aa9.02□□□□□ -0.97
TPM1-223ENST00000560445 SERTAD4-AS1Q5TG53 156 aa9.02□□□□□ -0.97
TPM1-223ENST00000560445 C15orf56Q8N910 161 aa9.02□□□□□ -0.97
TPM1-223ENST00000560445 F8W036 122 aa9.01□□□□□ -0.97
TPM1-223ENST00000560445 XCL1P47992 114 aa9.01□□□□□ -0.97
TPM1-223ENST00000560445 POLR2KP53803 58 aaKnown RBP9.01□□□□□ -0.97
TPM1-223ENST00000560445 KRTAP10-4P60372 401 aaPredicted RBP9.01□□□□□ -0.97
TPM1-223ENST00000560445 RAB14P61106 215 aa9.01□□□□□ -0.97
TPM1-223ENST00000560445 SUMO2P61956 95 aaKnown RBP9.01□□□□□ -0.97
TPM1-223ENST00000560445 SPACA4Q8TDM5 124 aa9.01□□□□□ -0.97
TPM1-223ENST00000560445 CSDC2Q9Y534 153 aaKnown RBP9.01□□□□□ -0.97
TPM1-223ENST00000560445 LINC00959A0A1B0GUT2 108 aa9□□□□□ -0.97
TPM1-223ENST00000560445 SMIM27A0A1W2PRY6 76 aa9□□□□□ -0.97
TPM1-223ENST00000560445 C1orf196B1AJZ1 125 aa9□□□□□ -0.97
TPM1-223ENST00000560445 C9JQL5 133 aa9□□□□□ -0.97
TPM1-223ENST00000560445 CAMPP49913 170 aa9□□□□□ -0.97
TPM1-223ENST00000560445 SRSF3P84103 164 aaKnown RBP9□□□□□ -0.97
TPM1-223ENST00000560445 FOXI1Q12951 378 aa9□□□□□ -0.97
TPM1-223ENST00000560445 HIGD2BQ4VC39 106 aa9□□□□□ -0.97
TPM1-223ENST00000560445 CD164L2Q6UWJ8 174 aa9□□□□□ -0.97
TPM1-223ENST00000560445 ZNF664Q8N3J9 261 aa9□□□□□ -0.97
TPM1-223ENST00000560445 ZNF561-AS1K7EIQ3 104 aa8.99□□□□□ -0.97
TPM1-223ENST00000560445 MALP21145 153 aa8.99□□□□□ -0.97
TPM1-223ENST00000560445 C20orf78Q9BR46 151 aa8.99□□□□□ -0.97
TPM1-223ENST00000560445 CDC42SE2Q9NRR3 84 aa8.99□□□□□ -0.97
TPM1-223ENST00000560445 PLAC8Q9NZF1 115 aa8.99□□□□□ -0.97
TPM1-223ENST00000560445 A0A087WYN8 130 aa8.98□□□□□ -0.97
TPM1-223ENST00000560445 GAS8-AS1O95177 125 aa8.98□□□□□ -0.97
TPM1-223ENST00000560445 CKS2P33552 79 aa8.98□□□□□ -0.97
TPM1-223ENST00000560445 FAM104BQ5XKR9 115 aa8.98□□□□□ -0.97
TPM1-223ENST00000560445 SMKR1H3BMG3 65 aa8.97□□□□□ -0.97
TPM1-223ENST00000560445 COX7A2LO14548 114 aa8.97□□□□□ -0.97
TPM1-223ENST00000560445 PPBPP02775 128 aa8.97□□□□□ -0.97
TPM1-223ENST00000560445 RPL32P62910 135 aaKnown RBP8.97□□□□□ -0.97
TPM1-223ENST00000560445 COX6A2Q02221 97 aa8.97□□□□□ -0.97
TPM1-223ENST00000560445 Q6ZRU5 148 aa8.97□□□□□ -0.97
TPM1-223ENST00000560445 CARD19Q96LW7 228 aa8.97□□□□□ -0.97
TPM1-223ENST00000560445 TIMM21Q9BVV7 248 aa8.97□□□□□ -0.97
TPM1-223ENST00000560445 APOMO95445 188 aa8.96□□□□□ -0.98
TPM1-223ENST00000560445 SLPIP03973 132 aa8.96□□□□□ -0.98
TPM1-223ENST00000560445 HBBP68871 147 aa8.96□□□□□ -0.98
TPM1-223ENST00000560445 MAJINQ3KP22 176 aa8.96□□□□□ -0.98
TPM1-223ENST00000560445 MRPL51Q4U2R6 128 aaKnown RBP8.96□□□□□ -0.98
TPM1-223ENST00000560445 NRACQ8N912 160 aa8.96□□□□□ -0.98
TPM1-223ENST00000560445 TRBV24-1A0A075B6N3 115 aa8.95□□□□□ -0.98
TPM1-223ENST00000560445 PANO1I0J062 215 aa8.95□□□□□ -0.98
TPM1-223ENST00000560445 PHOX2AO14813 284 aa8.95□□□□□ -0.98
TPM1-223ENST00000560445 CHTF8P0CG12 524 aa8.95□□□□□ -0.98
TPM1-223ENST00000560445 SMCPP49901 116 aaPredicted RBP8.95□□□□□ -0.98
TPM1-223ENST00000560445 IGKV2-24A0A0C4DH68 120 aa8.94□□□□□ -0.98
TPM1-223ENST00000560445 SYCNQ0VAF6 134 aa8.94□□□□□ -0.98
TPM1-223ENST00000560445 PNRC1Q12796 327 aaPredicted RBP8.94□□□□□ -0.98
TPM1-223ENST00000560445 MRPL54Q6P161 138 aaKnown RBP8.94□□□□□ -0.98
TPM1-223ENST00000560445 ATP5L2Q7Z4Y8 100 aa8.94□□□□□ -0.98
TPM1-223ENST00000560445 UBE2D4Q9Y2X8 147 aa8.94□□□□□ -0.98
TPM1-223ENST00000560445 STPG4Q8N801 248 aa8.93□□□□□ -0.98
TPM1-223ENST00000560445 PRSS3P2Q8NHM4 247 aa8.93□□□□□ -0.98
TPM1-223ENST00000560445 SPANXA1Q9NS26 97 aa8.93□□□□□ -0.98
TPM1-223ENST00000560445 TNFRSF6BO95407 300 aa8.92□□□□□ -0.98
TPM1-223ENST00000560445 MT-ND4LP03901 98 aa8.92□□□□□ -0.98
TPM1-223ENST00000560445 SMIM2Q9BVW6 85 aa8.92□□□□□ -0.98
TPM1-223ENST00000560445 IGLV4-69A0A075B6H9 119 aa8.91□□□□□ -0.98
TPM1-223ENST00000560445 TRAV13-1A0A0B4J241 112 aa8.91□□□□□ -0.98
TPM1-223ENST00000560445 LOC107984640A0A0U1RRK4 108 aa8.91□□□□□ -0.98
TPM1-223ENST00000560445 D6R8Y8 96 aa8.91□□□□□ -0.98
TPM1-223ENST00000560445 F8WDY8 70 aa8.91□□□□□ -0.98
TPM1-223ENST00000560445 RAB5AP20339 215 aa8.91□□□□□ -0.98
TPM1-223ENST00000560445 ANAPC16Q96DE5 110 aa8.91□□□□□ -0.98
TPM1-223ENST00000560445 C2orf48Q96LS8 159 aa8.91□□□□□ -0.98
TPM1-223ENST00000560445 ORMDL3Q8N138 153 aa8.9□□□□□ -0.98
TPM1-223ENST00000560445 OR10D4PQ8NGN7 298 aa8.9□□□□□ -0.98
TPM1-223ENST00000560445 CAMK2N2Q96S95 79 aa8.9□□□□□ -0.98
TPM1-223ENST00000560445 LAMTOR2Q9Y2Q5 125 aa8.9□□□□□ -0.98
TPM1-223ENST00000560445 A0A096LNI7 61 aa8.89□□□□□ -0.99
TPM1-223ENST00000560445 A0A1B0GXF2 115 aa8.89□□□□□ -0.99
TPM1-223ENST00000560445 IFI27P40305 119 aaPredicted RBP8.88□□□□□ -0.99
TPM1-223ENST00000560445 MRPS36P82909 103 aaKnown RBP8.88□□□□□ -0.99
TPM1-223ENST00000560445 TMEM136Q6ZRR5 245 aa8.88□□□□□ -0.99
TPM1-223ENST00000560445 Q6ZUT4 128 aa8.88□□□□□ -0.99
TPM1-223ENST00000560445 PLA2G2DQ9UNK4 145 aa8.88□□□□□ -0.99
TPM1-223ENST00000560445 HNRNPA3P51991 378 aaKnown RBP8.87□□□□□ -0.99
TPM1-223ENST00000560445 PTTG1IPP53801 180 aa8.87□□□□□ -0.99
TPM1-223ENST00000560445 PRR3P79522 188 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms