RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 LINC01620Q4KN68 170 aa9.85□□□□□ -0.83
SNRPA1-210ENST00000560383 DGAT2L7PQ6IED9 249 aa9.85□□□□□ -0.83
SNRPA1-210ENST00000560383 RNASEKQ6P5S7 137 aaKnown RBP9.85□□□□□ -0.83
SNRPA1-210ENST00000560383 ATP5L2Q7Z4Y8 100 aa9.85□□□□□ -0.83
SNRPA1-210ENST00000560383 MRPL52Q86TS9 123 aaKnown RBP9.85□□□□□ -0.83
SNRPA1-210ENST00000560383 C20orf78Q9BR46 151 aa9.85□□□□□ -0.83
SNRPA1-210ENST00000560383 RPL32P62910 135 aaKnown RBP9.84□□□□□ -0.83
SNRPA1-210ENST00000560383 MRPL54Q6P161 138 aaKnown RBP9.84□□□□□ -0.83
SNRPA1-210ENST00000560383 C7orf77A4D0Y5 90 aa9.83□□□□□ -0.84
SNRPA1-210ENST00000560383 F8W036 122 aa9.83□□□□□ -0.84
SNRPA1-210ENST00000560383 COMMD7Q86VX2 200 aa9.83□□□□□ -0.84
SNRPA1-210ENST00000560383 ANAPC16Q96DE5 110 aa9.83□□□□□ -0.84
SNRPA1-210ENST00000560383 MT-ND4LP03901 98 aa9.82□□□□□ -0.84
SNRPA1-210ENST00000560383 CKS2P33552 79 aa9.82□□□□□ -0.84
SNRPA1-210ENST00000560383 UQCC3Q6UW78 93 aa9.82□□□□□ -0.84
SNRPA1-210ENST00000560383 C9orf163Q8N9P6 203 aa9.82□□□□□ -0.84
SNRPA1-210ENST00000560383 OR5A1Q8NGJ0 315 aa9.82□□□□□ -0.84
SNRPA1-210ENST00000560383 TMEM101Q96IK0 257 aa9.82□□□□□ -0.84
SNRPA1-210ENST00000560383 BTF3L4Q96K17 158 aa9.82□□□□□ -0.84
SNRPA1-210ENST00000560383 PHOX2AO14813 284 aa9.81□□□□□ -0.84
SNRPA1-210ENST00000560383 TNFRSF6BO95407 300 aa9.81□□□□□ -0.84
SNRPA1-210ENST00000560383 PPBPP02775 128 aa9.81□□□□□ -0.84
SNRPA1-210ENST00000560383 CNBPP62633 177 aaKnown RBP9.81□□□□□ -0.84
SNRPA1-210ENST00000560383 SCXQ7RTU7 201 aa9.81□□□□□ -0.84
SNRPA1-210ENST00000560383 CHCHD10Q8WYQ3 142 aaPredicted RBP9.81□□□□□ -0.84
SNRPA1-210ENST00000560383 KIR2DL4Q99706 377 aa9.81□□□□□ -0.84
SNRPA1-210ENST00000560383 CHAC1Q9BUX1 264 aa9.81□□□□□ -0.84
SNRPA1-210ENST00000560383 CDC42SE2Q9NRR3 84 aa9.81□□□□□ -0.84
SNRPA1-210ENST00000560383 CSDC2Q9Y534 153 aaKnown RBP9.81□□□□□ -0.84
SNRPA1-210ENST00000560383 IGKV3OR2-268A0A0C4DH90 116 aa9.8□□□□□ -0.84
SNRPA1-210ENST00000560383 GAGE12HA6NDE8 117 aa9.8□□□□□ -0.84
SNRPA1-210ENST00000560383 D6R8Y8 96 aa9.8□□□□□ -0.84
SNRPA1-210ENST00000560383 FCER1GP30273 86 aa9.8□□□□□ -0.84
SNRPA1-210ENST00000560383 LINC00959A0A1B0GUT2 108 aa9.79□□□□□ -0.84
SNRPA1-210ENST00000560383 TCAPO15273 167 aa9.79□□□□□ -0.84
SNRPA1-210ENST00000560383 ADCYAP1P18509 176 aa9.79□□□□□ -0.84
SNRPA1-210ENST00000560383 ZNF664Q8N3J9 261 aa9.79□□□□□ -0.84
SNRPA1-210ENST00000560383 C15orf56Q8N910 161 aa9.79□□□□□ -0.84
SNRPA1-210ENST00000560383 TMEM218A2RU14 115 aa9.78□□□□□ -0.84
SNRPA1-210ENST00000560383 NPYP01303 97 aa9.78□□□□□ -0.84
SNRPA1-210ENST00000560383 SLPIP03973 132 aa9.78□□□□□ -0.84
SNRPA1-210ENST00000560383 SMAGPQ0VAQ4 97 aa9.78□□□□□ -0.84
SNRPA1-210ENST00000560383 CFAP161Q6P656 301 aa9.78□□□□□ -0.84
SNRPA1-210ENST00000560383 TIMM21Q9BVV7 248 aa9.78□□□□□ -0.84
SNRPA1-210ENST00000560383 SMIM2Q9BVW6 85 aa9.78□□□□□ -0.84
SNRPA1-210ENST00000560383 UBE2D4Q9Y2X8 147 aa9.78□□□□□ -0.84
SNRPA1-210ENST00000560383 hDV102S1A0JD36 115 aa9.77□□□□□ -0.85
SNRPA1-210ENST00000560383 KRTAP29-1A8MX34 341 aaPredicted RBP9.77□□□□□ -0.85
SNRPA1-210ENST00000560383 FOXI1Q12951 378 aa9.77□□□□□ -0.85
SNRPA1-210ENST00000560383 SDIM1Q6ZPB5 146 aa9.77□□□□□ -0.85
SNRPA1-210ENST00000560383 ORMDL3Q8N138 153 aa9.77□□□□□ -0.85
SNRPA1-210ENST00000560383 TMEM136Q6ZRR5 245 aa9.76□□□□□ -0.85
SNRPA1-210ENST00000560383 CIRBP-AS1Q8TBR5 109 aa9.76□□□□□ -0.85
SNRPA1-210ENST00000560383 IMMP2LQ96T52 175 aa9.76□□□□□ -0.85
SNRPA1-210ENST00000560383 AP5S1Q9NUS5 200 aa9.76□□□□□ -0.85
SNRPA1-210ENST00000560383 PRSS47A8MTI9 375 aa9.75□□□□□ -0.85
SNRPA1-210ENST00000560383 CCL25O15444 150 aa9.75□□□□□ -0.85
SNRPA1-210ENST00000560383 TMEM18Q96B42 140 aa9.75□□□□□ -0.85
SNRPA1-210ENST00000560383 PKHD1L1Q86WI1 4243 aa9.74□□□□□ -0.85
SNRPA1-210ENST00000560383 GVQW2A0A096LPI5 108 aaPredicted RBP9.74□□□□□ -0.85
SNRPA1-210ENST00000560383 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.74□□□□□ -0.85
SNRPA1-210ENST00000560383 XCL1P47992 114 aa9.74□□□□□ -0.85
SNRPA1-210ENST00000560383 KRTAP10-4P60372 401 aaPredicted RBP9.74□□□□□ -0.85
SNRPA1-210ENST00000560383 SS18Q15532 418 aa9.74□□□□□ -0.85
SNRPA1-210ENST00000560383 CD164L2Q6UWJ8 174 aa9.74□□□□□ -0.85
SNRPA1-210ENST00000560383 PRELID3AQ96N28 172 aa9.74□□□□□ -0.85
SNRPA1-210ENST00000560383 SEC11CQ9BY50 192 aa9.74□□□□□ -0.85
SNRPA1-210ENST00000560383 CTDSP1Q9GZU7 261 aa9.74□□□□□ -0.85
SNRPA1-210ENST00000560383 LAMTOR2Q9Y2Q5 125 aa9.74□□□□□ -0.85
SNRPA1-210ENST00000560383 C1orf196B1AJZ1 125 aa9.72□□□□□ -0.85
SNRPA1-210ENST00000560383 CIRBPQ14011 172 aaKnown RBP9.72□□□□□ -0.85
SNRPA1-210ENST00000560383 FAM104AQ969W3 186 aa9.72□□□□□ -0.85
SNRPA1-210ENST00000560383 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.72□□□□□ -0.85
SNRPA1-210ENST00000560383 LRP1Q07954 4544 aaKnown RBP9.72□□□□□ -0.85
SNRPA1-210ENST00000560383 FAT3Q8TDW7 4589 aa9.72□□□□□ -0.85
SNRPA1-210ENST00000560383 IGHV3-64A0A075B6Q5 118 aa9.71□□□□□ -0.86
SNRPA1-210ENST00000560383 RPL39P62891 51 aaKnown RBP9.71□□□□□ -0.86
SNRPA1-210ENST00000560383 HIGD2BQ4VC39 106 aa9.71□□□□□ -0.86
SNRPA1-210ENST00000560383 Q6ZUT4 128 aa9.71□□□□□ -0.86
SNRPA1-210ENST00000560383 SPANXA1Q9NS26 97 aa9.71□□□□□ -0.86
SNRPA1-210ENST00000560383 TRAV9-1A0A075B6T8 112 aa9.7□□□□□ -0.86
SNRPA1-210ENST00000560383 IGHV1-58A0A0C4DH39 117 aa9.7□□□□□ -0.86
SNRPA1-210ENST00000560383 PANO1I0J062 215 aa9.7□□□□□ -0.86
SNRPA1-210ENST00000560383 MRPS36P82909 103 aaKnown RBP9.7□□□□□ -0.86
SNRPA1-210ENST00000560383 C10orf91Q5T1B1 145 aa9.7□□□□□ -0.86
SNRPA1-210ENST00000560383 RAB5AP20339 215 aa9.69□□□□□ -0.86
SNRPA1-210ENST00000560383 RNASE13Q5GAN3 156 aaKnown RBP9.69□□□□□ -0.86
SNRPA1-210ENST00000560383 MAP1LC3AQ9H492 121 aa9.68□□□□□ -0.86
SNRPA1-210ENST00000560383 CARHSP1Q9Y2V2 147 aaKnown RBP9.68□□□□□ -0.86
SNRPA1-210ENST00000560383 PYGO1Q9Y3Y4 419 aa9.68□□□□□ -0.86
SNRPA1-210ENST00000560383 TRAV13-1A0A0B4J241 112 aa9.67□□□□□ -0.86
SNRPA1-210ENST00000560383 A6NJY4 79 aa9.67□□□□□ -0.86
SNRPA1-210ENST00000560383 OXTP01178 125 aa9.67□□□□□ -0.86
SNRPA1-210ENST00000560383 Q8N8P6 123 aa9.67□□□□□ -0.86
SNRPA1-210ENST00000560383 LOC389332A0A1B0GUA5 103 aa9.66□□□□□ -0.86
SNRPA1-210ENST00000560383 K7EMI3 77 aa9.66□□□□□ -0.86
SNRPA1-210ENST00000560383 COX7A2LO14548 114 aa9.66□□□□□ -0.86
SNRPA1-210ENST00000560383 LORP23490 312 aaPredicted RBP9.66□□□□□ -0.86
SNRPA1-210ENST00000560383 OPRPNQ99935 248 aaPredicted RBP9.66□□□□□ -0.86
SNRPA1-210ENST00000560383 HMCN2Q8NDA2 5059 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms