RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 ZNF25P17030 456 aaPredicted RBP8.18□□□□□ -1.1
TPM1-220ENST00000559556 FOXI1Q12951 378 aa8.18□□□□□ -1.1
TPM1-220ENST00000559556 RNASEKQ6P5S7 137 aaKnown RBP8.18□□□□□ -1.1
TPM1-220ENST00000559556 RPP21Q9H633 154 aaKnown RBP8.18□□□□□ -1.1
TPM1-220ENST00000559556 CARHSP1Q9Y2V2 147 aaKnown RBP8.18□□□□□ -1.1
TPM1-220ENST00000559556 A0A0J9YXV3 536 aa8.17□□□□□ -1.1
TPM1-220ENST00000559556 K7EN84 100 aa8.17□□□□□ -1.1
TPM1-220ENST00000559556 FGF6P10767 208 aa8.17□□□□□ -1.1
TPM1-220ENST00000559556 SVBPQ8N300 66 aa8.17□□□□□ -1.1
TPM1-220ENST00000559556 OR5A1Q8NGJ0 315 aa8.17□□□□□ -1.1
TPM1-220ENST00000559556 LINC00474Q9P2X8 69 aa8.17□□□□□ -1.1
TPM1-220ENST00000559556 PKIGQ9Y2B9 76 aa8.17□□□□□ -1.1
TPM1-220ENST00000559556 SDHAF1A6NFY7 115 aa8.16□□□□□ -1.1
TPM1-220ENST00000559556 SNAPINO95295 136 aa8.16□□□□□ -1.1
TPM1-220ENST00000559556 OCC1Q8TAD7 63 aa8.16□□□□□ -1.1
TPM1-220ENST00000559556 RNASE7Q9H1E1 156 aaKnown RBP8.16□□□□□ -1.1
TPM1-220ENST00000559556 ATP6V1G1O75348 118 aa8.15□□□□□ -1.1
TPM1-220ENST00000559556 APOC3P02656 99 aa8.15□□□□□ -1.1
TPM1-220ENST00000559556 ADCYAP1P18509 176 aa8.15□□□□□ -1.1
TPM1-220ENST00000559556 ODF1Q14990 250 aa8.15□□□□□ -1.1
TPM1-220ENST00000559556 SPINK6Q6UWN8 80 aa8.15□□□□□ -1.1
TPM1-220ENST00000559556 SMIM15Q7Z3B0 74 aa8.15□□□□□ -1.1
TPM1-220ENST00000559556 LINC01551Q86U37 167 aa8.15□□□□□ -1.1
TPM1-220ENST00000559556 KRTAP3-3Q9BYR6 98 aa8.15□□□□□ -1.1
TPM1-220ENST00000559556 KRTAP3-2Q9BYR7 98 aa8.15□□□□□ -1.1
TPM1-220ENST00000559556 IGHV1-58A0A0C4DH39 117 aa8.14□□□□□ -1.11
TPM1-220ENST00000559556 TRBV6-5A0A0K0K1A5 114 aa8.14□□□□□ -1.11
TPM1-220ENST00000559556 LINC00959A0A1B0GUT2 108 aa8.14□□□□□ -1.11
TPM1-220ENST00000559556 FAM231BA6NCW3 169 aa8.14□□□□□ -1.11
TPM1-220ENST00000559556 XCL1P47992 114 aa8.14□□□□□ -1.11
TPM1-220ENST00000559556 FOXA3P55318 350 aaPredicted RBP8.14□□□□□ -1.11
TPM1-220ENST00000559556 KRTAP10-8P60410 259 aa8.14□□□□□ -1.11
TPM1-220ENST00000559556 RPL23P62829 140 aaKnown RBP8.14□□□□□ -1.11
TPM1-220ENST00000559556 ADIRFQ15847 76 aa8.14□□□□□ -1.11
TPM1-220ENST00000559556 REG3GQ6UW15 175 aa8.14□□□□□ -1.11
TPM1-220ENST00000559556 CARD19Q96LW7 228 aa8.14□□□□□ -1.11
TPM1-220ENST00000559556 I3L3M4 83 aa8.13□□□□□ -1.11
TPM1-220ENST00000559556 PPP1R2P9O14990 202 aa8.13□□□□□ -1.11
TPM1-220ENST00000559556 CCL25O15444 150 aa8.13□□□□□ -1.11
TPM1-220ENST00000559556 MT-ND4LP03901 98 aa8.13□□□□□ -1.11
TPM1-220ENST00000559556 ESDP10768 282 aa8.13□□□□□ -1.11
TPM1-220ENST00000559556 RHEBQ15382 184 aa8.13□□□□□ -1.11
TPM1-220ENST00000559556 ANAPC16Q96DE5 110 aa8.13□□□□□ -1.11
TPM1-220ENST00000559556 TMEM101Q96IK0 257 aa8.13□□□□□ -1.11
TPM1-220ENST00000559556 BTF3L4Q96K17 158 aa8.13□□□□□ -1.11
TPM1-220ENST00000559556 LPAP08519 4548 aa8.12□□□□□ -1.11
TPM1-220ENST00000559556 TSHBP01222 138 aa8.12□□□□□ -1.11
TPM1-220ENST00000559556 PMCHP20382 165 aa8.12□□□□□ -1.11
TPM1-220ENST00000559556 SRSF9Q13242 221 aaKnown RBP eCLIP8.12□□□□□ -1.11
TPM1-220ENST00000559556 Q6ZRP5 223 aa8.12□□□□□ -1.11
TPM1-220ENST00000559556 FAM231DQ6ZW35 169 aa8.12□□□□□ -1.11
TPM1-220ENST00000559556 ISOC2Q96AB3 205 aa8.12□□□□□ -1.11
TPM1-220ENST00000559556 LINC00526Q96FQ7 95 aa8.12□□□□□ -1.11
TPM1-220ENST00000559556 MRAP2Q96G30 205 aa8.12□□□□□ -1.11
TPM1-220ENST00000559556 CTDSP1Q9GZU7 261 aa8.12□□□□□ -1.11
TPM1-220ENST00000559556 OSTCQ9NRP0 149 aa8.12□□□□□ -1.11
TPM1-220ENST00000559556 MRPL52Q86TS9 123 aaKnown RBP8.11□□□□□ -1.11
TPM1-220ENST00000559556 A8MWL6 223 aa8.1□□□□□ -1.11
TPM1-220ENST00000559556 PTTG1IPP53801 180 aa8.1□□□□□ -1.11
TPM1-220ENST00000559556 SYCNQ0VAF6 134 aa8.1□□□□□ -1.11
TPM1-220ENST00000559556 SS18Q15532 418 aa8.1□□□□□ -1.11
TPM1-220ENST00000559556 CD164L2Q6UWJ8 174 aa8.1□□□□□ -1.11
TPM1-220ENST00000559556 CDC42SE2Q9NRR3 84 aa8.1□□□□□ -1.11
TPM1-220ENST00000559556 TMEM242Q9NWH2 141 aa8.1□□□□□ -1.11
TPM1-220ENST00000559556 C7orf77A4D0Y5 90 aa8.09□□□□□ -1.11
TPM1-220ENST00000559556 ZNF561-AS1K7EIQ3 104 aa8.09□□□□□ -1.11
TPM1-220ENST00000559556 GATCO43716 136 aaKnown RBP8.09□□□□□ -1.11
TPM1-220ENST00000559556 GAS8-AS1O95177 125 aa8.09□□□□□ -1.11
TPM1-220ENST00000559556 CAMPP49913 170 aa8.09□□□□□ -1.11
TPM1-220ENST00000559556 POLR2KP53803 58 aaKnown RBP8.09□□□□□ -1.11
TPM1-220ENST00000559556 CT83Q5H943 113 aa8.09□□□□□ -1.11
TPM1-220ENST00000559556 ST20Q9HBF5 79 aa8.09□□□□□ -1.11
TPM1-220ENST00000559556 TRBV27A0A0K0K1C4 114 aa8.08□□□□□ -1.12
TPM1-220ENST00000559556 LOC107984640A0A0U1RRK4 108 aa8.08□□□□□ -1.12
TPM1-220ENST00000559556 ZNF664Q8N3J9 261 aa8.08□□□□□ -1.12
TPM1-220ENST00000559556 IMMP2LQ96T52 175 aa8.08□□□□□ -1.12
TPM1-220ENST00000559556 RPS10P5Q9NQ39 176 aa8.08□□□□□ -1.12
TPM1-220ENST00000559556 TMEM191AQ9H0A3 160 aa8.07□□□□□ -1.12
TPM1-220ENST00000559556 NUP35Q8NFH5 326 aa8.06□□□□□ -1.12
TPM1-220ENST00000559556 BORCS7Q96B45 105 aa8.06□□□□□ -1.12
TPM1-220ENST00000559556 IGLV4-69A0A075B6H9 119 aa8.05□□□□□ -1.12
TPM1-220ENST00000559556 A0A1B0GUT8 65 aa8.05□□□□□ -1.12
TPM1-220ENST00000559556 C1orf196B1AJZ1 125 aa8.05□□□□□ -1.12
TPM1-220ENST00000559556 S100PP25815 95 aa8.05□□□□□ -1.12
TPM1-220ENST00000559556 TSKUQ8WUA8 353 aa8.05□□□□□ -1.12
TPM1-220ENST00000559556 SMCO4Q9NRQ5 59 aa8.05□□□□□ -1.12
TPM1-220ENST00000559556 CSDC2Q9Y534 153 aaKnown RBP8.05□□□□□ -1.12
TPM1-220ENST00000559556 V9GYV3 84 aa8.05□□□□□ -1.12
TPM1-220ENST00000559556 A0A1W2PNN7 141 aa8.04□□□□□ -1.12
TPM1-220ENST00000559556 HIGD1CA8MV81 97 aa8.04□□□□□ -1.12
TPM1-220ENST00000559556 COX7A2LO14548 114 aa8.04□□□□□ -1.12
TPM1-220ENST00000559556 APOMO95445 188 aa8.04□□□□□ -1.12
TPM1-220ENST00000559556 RAB4AP20338 218 aa8.04□□□□□ -1.12
TPM1-220ENST00000559556 GAGE2BQ13066 116 aa8.04□□□□□ -1.12
TPM1-220ENST00000559556 PSORS1C2Q9UIG4 136 aa8.04□□□□□ -1.12
TPM1-220ENST00000559556 TRAV9-1A0A075B6T8 112 aa8.03□□□□□ -1.12
TPM1-220ENST00000559556 MALP21145 153 aa8.03□□□□□ -1.12
TPM1-220ENST00000559556 SMAGPQ0VAQ4 97 aa8.03□□□□□ -1.12
TPM1-220ENST00000559556 C2orf48Q96LS8 159 aa8.03□□□□□ -1.12
TPM1-220ENST00000559556 CAMK2N2Q96S95 79 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms