RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 GNG4P50150 75 aa10.04□□□□□ -0.8
CDC42BPB-205ENST00000559245 CARD19Q96LW7 228 aa10.04□□□□□ -0.8
CDC42BPB-205ENST00000559245 IGHV1-58A0A0C4DH39 117 aa10.03□□□□□ -0.8
CDC42BPB-205ENST00000559245 APCSP02743 223 aa10.03□□□□□ -0.8
CDC42BPB-205ENST00000559245 CTRLP40313 264 aa10.03□□□□□ -0.8
CDC42BPB-205ENST00000559245 XCL1P47992 114 aa10.03□□□□□ -0.8
CDC42BPB-205ENST00000559245 TWIST1Q15672 202 aa10.03□□□□□ -0.8
CDC42BPB-205ENST00000559245 OR5A1Q8NGJ0 315 aa10.03□□□□□ -0.8
CDC42BPB-205ENST00000559245 RPL39LQ96EH5 51 aaKnown RBP10.03□□□□□ -0.8
CDC42BPB-205ENST00000559245 SMIM7Q9BQ49 75 aa10.03□□□□□ -0.8
CDC42BPB-205ENST00000559245 ZNF727A8MUV8 499 aa10.01□□□□□ -0.81
CDC42BPB-205ENST00000559245 CCL25O15444 150 aa10.01□□□□□ -0.81
CDC42BPB-205ENST00000559245 ZNF25P17030 456 aaPredicted RBP10.01□□□□□ -0.81
CDC42BPB-205ENST00000559245 PNRC1Q12796 327 aaPredicted RBP10.01□□□□□ -0.81
CDC42BPB-205ENST00000559245 LINC01551Q86U37 167 aa10.01□□□□□ -0.81
CDC42BPB-205ENST00000559245 CNFNQ9BYD5 112 aa10.01□□□□□ -0.81
CDC42BPB-205ENST00000559245 NAT8Q9UHE5 227 aa10.01□□□□□ -0.81
CDC42BPB-205ENST00000559245 LINC00959A0A1B0GUT2 108 aa10□□□□□ -0.81
CDC42BPB-205ENST00000559245 SYCNQ0VAF6 134 aa10□□□□□ -0.81
CDC42BPB-205ENST00000559245 NUDT10Q8NFP7 164 aa10□□□□□ -0.81
CDC42BPB-205ENST00000559245 NUDT11Q96G61 164 aa10□□□□□ -0.81
CDC42BPB-205ENST00000559245 BIN3Q9NQY0 253 aa10□□□□□ -0.81
CDC42BPB-205ENST00000559245 SDHAF1A6NFY7 115 aa9.99□□□□□ -0.81
CDC42BPB-205ENST00000559245 F8W036 122 aa9.99□□□□□ -0.81
CDC42BPB-205ENST00000559245 ZNF561-AS1K7EIQ3 104 aa9.99□□□□□ -0.81
CDC42BPB-205ENST00000559245 K7EN84 100 aa9.99□□□□□ -0.81
CDC42BPB-205ENST00000559245 PTTG1IPP53801 180 aa9.99□□□□□ -0.81
CDC42BPB-205ENST00000559245 TMEM241Q24JQ0 296 aa9.99□□□□□ -0.81
CDC42BPB-205ENST00000559245 TMEM101Q96IK0 257 aa9.99□□□□□ -0.81
CDC42BPB-205ENST00000559245 BTF3L4Q96K17 158 aa9.99□□□□□ -0.81
CDC42BPB-205ENST00000559245 FAM231BA6NCW3 169 aa9.98□□□□□ -0.81
CDC42BPB-205ENST00000559245 RPL23P62829 140 aaKnown RBP9.98□□□□□ -0.81
CDC42BPB-205ENST00000559245 GAGE2BQ13066 116 aa9.98□□□□□ -0.81
CDC42BPB-205ENST00000559245 FAM231DQ6ZW35 169 aa9.98□□□□□ -0.81
CDC42BPB-205ENST00000559245 OCC1Q8TAD7 63 aa9.98□□□□□ -0.81
CDC42BPB-205ENST00000559245 CEBPGP53567 150 aa9.97□□□□□ -0.81
CDC42BPB-205ENST00000559245 SS18Q15532 418 aa9.97□□□□□ -0.81
CDC42BPB-205ENST00000559245 ISOC2Q96AB3 205 aa9.97□□□□□ -0.81
CDC42BPB-205ENST00000559245 LOC107984640A0A0U1RRK4 108 aa9.96□□□□□ -0.82
CDC42BPB-205ENST00000559245 A0A1W2PNN7 141 aa9.96□□□□□ -0.82
CDC42BPB-205ENST00000559245 I3L3M4 83 aa9.96□□□□□ -0.82
CDC42BPB-205ENST00000559245 ATP6V1G1O75348 118 aa9.96□□□□□ -0.82
CDC42BPB-205ENST00000559245 PMCHP20382 165 aa9.96□□□□□ -0.82
CDC42BPB-205ENST00000559245 CAMPP49913 170 aa9.96□□□□□ -0.82
CDC42BPB-205ENST00000559245 FOXA3P55318 350 aaPredicted RBP9.96□□□□□ -0.82
CDC42BPB-205ENST00000559245 SMIM15Q7Z3B0 74 aa9.96□□□□□ -0.82
CDC42BPB-205ENST00000559245 ESDP10768 282 aa9.95□□□□□ -0.82
CDC42BPB-205ENST00000559245 CD164L2Q6UWJ8 174 aa9.95□□□□□ -0.82
CDC42BPB-205ENST00000559245 RNASE7Q9H1E1 156 aaKnown RBP9.95□□□□□ -0.82
CDC42BPB-205ENST00000559245 RPP21Q9H633 154 aaKnown RBP9.95□□□□□ -0.82
CDC42BPB-205ENST00000559245 PSORS1C2Q9UIG4 136 aa9.95□□□□□ -0.82
CDC42BPB-205ENST00000559245 MT-ND6P03923 174 aa9.94□□□□□ -0.82
CDC42BPB-205ENST00000559245 SVBPQ8N300 66 aa9.94□□□□□ -0.82
CDC42BPB-205ENST00000559245 ZNF664Q8N3J9 261 aa9.94□□□□□ -0.82
CDC42BPB-205ENST00000559245 OSTCQ9NRP0 149 aa9.94□□□□□ -0.82
CDC42BPB-205ENST00000559245 IGLV4-69A0A075B6H9 119 aa9.93□□□□□ -0.82
CDC42BPB-205ENST00000559245 TRBV6-5A0A0K0K1A5 114 aa9.93□□□□□ -0.82
CDC42BPB-205ENST00000559245 S100A1P23297 94 aa9.93□□□□□ -0.82
CDC42BPB-205ENST00000559245 RHEBQ15382 184 aa9.93□□□□□ -0.82
CDC42BPB-205ENST00000559245 CT83Q5H943 113 aa9.93□□□□□ -0.82
CDC42BPB-205ENST00000559245 MRAP2Q96G30 205 aa9.93□□□□□ -0.82
CDC42BPB-205ENST00000559245 CDC42SE2Q9NRR3 84 aa9.93□□□□□ -0.82
CDC42BPB-205ENST00000559245 TSHBP01222 138 aa9.92□□□□□ -0.82
CDC42BPB-205ENST00000559245 ADIRFQ15847 76 aa9.92□□□□□ -0.82
CDC42BPB-205ENST00000559245 NUP35Q8NFH5 326 aa9.92□□□□□ -0.82
CDC42BPB-205ENST00000559245 TMEM242Q9NWH2 141 aa9.92□□□□□ -0.82
CDC42BPB-205ENST00000559245 APOC3P02656 99 aa9.91□□□□□ -0.82
CDC42BPB-205ENST00000559245 MALP21145 153 aa9.91□□□□□ -0.82
CDC42BPB-205ENST00000559245 C9orf116Q5BN46 136 aaPredicted RBP9.91□□□□□ -0.82
CDC42BPB-205ENST00000559245 C1orf137Q5JT78 98 aa9.91□□□□□ -0.82
CDC42BPB-205ENST00000559245 MRPL52Q86TS9 123 aaKnown RBP9.91□□□□□ -0.82
CDC42BPB-205ENST00000559245 V9GYV3 84 aa9.91□□□□□ -0.82
CDC42BPB-205ENST00000559245 SNAPINO95295 136 aa9.9□□□□□ -0.82
CDC42BPB-205ENST00000559245 APOMO95445 188 aa9.9□□□□□ -0.82
CDC42BPB-205ENST00000559245 PHF5AQ7RTV0 110 aaKnown RBP9.9□□□□□ -0.82
CDC42BPB-205ENST00000559245 CAMK2N2Q96S95 79 aa9.9□□□□□ -0.82
CDC42BPB-205ENST00000559245 ST20Q9HBF5 79 aa9.9□□□□□ -0.82
CDC42BPB-205ENST00000559245 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.89□□□□□ -0.83
CDC42BPB-205ENST00000559245 PPP1R2P9O14990 202 aa9.89□□□□□ -0.83
CDC42BPB-205ENST00000559245 RPL18AQ02543 176 aaKnown RBP9.89□□□□□ -0.83
CDC42BPB-205ENST00000559245 PRR26Q8N8Z3 221 aa9.89□□□□□ -0.83
CDC42BPB-205ENST00000559245 ANAPC16Q96DE5 110 aa9.89□□□□□ -0.83
CDC42BPB-205ENST00000559245 CTDSP1Q9GZU7 261 aa9.89□□□□□ -0.83
CDC42BPB-205ENST00000559245 C1orf196B1AJZ1 125 aa9.88□□□□□ -0.83
CDC42BPB-205ENST00000559245 COX7A2LO14548 114 aa9.88□□□□□ -0.83
CDC42BPB-205ENST00000559245 C7orf77A4D0Y5 90 aa9.87□□□□□ -0.83
CDC42BPB-205ENST00000559245 MT-ND4LP03901 98 aa9.87□□□□□ -0.83
CDC42BPB-205ENST00000559245 POLR2KP53803 58 aaKnown RBP9.87□□□□□ -0.83
CDC42BPB-205ENST00000559245 DIRC1Q969H9 104 aa9.87□□□□□ -0.83
CDC42BPB-205ENST00000559245 C2orf48Q96LS8 159 aa9.87□□□□□ -0.83
CDC42BPB-205ENST00000559245 GATCO43716 136 aaKnown RBP9.86□□□□□ -0.83
CDC42BPB-205ENST00000559245 IGLV7-43P04211 117 aa9.86□□□□□ -0.83
CDC42BPB-205ENST00000559245 IMMP2LQ96T52 175 aa9.86□□□□□ -0.83
CDC42BPB-205ENST00000559245 OPRPNQ99935 248 aaPredicted RBP9.86□□□□□ -0.83
CDC42BPB-205ENST00000559245 TRBV27A0A0K0K1C4 114 aa9.85□□□□□ -0.83
CDC42BPB-205ENST00000559245 SMIM27A0A1W2PRY6 76 aa9.85□□□□□ -0.83
CDC42BPB-205ENST00000559245 TSKUQ8WUA8 353 aa9.85□□□□□ -0.83
CDC42BPB-205ENST00000559245 A8MWL6 223 aa9.84□□□□□ -0.83
CDC42BPB-205ENST00000559245 RNASE13Q5GAN3 156 aaKnown RBP9.84□□□□□ -0.83
CDC42BPB-205ENST00000559245 C5orf38Q86SI9 138 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms